Basic Information

Insect: Eupeodes luniger
Gene Symbol: -
Assembly: GCA_951509635.1
Location: OX608074.1:139299209-139302519[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 6.6e-05 0.013 17.4 1.1 2 23 419 440 418 440 0.97

2 16 1.6e-05 0.0032 19.3 1.1 1 23 446 468 446 468 0.98

3 16 6.1e-05 0.012 17.5 0.2 1 23 474 497 474 497 0.98

4 16 4.2e-05 0.0083 18.1 3.5 1 23 512 534 512 534 0.98

5 16 6e-05 0.012 17.5 3.7 1 23 566 588 566 588 0.97

6 16 0.0002 0.04 15.9 3.8 1 23 594 616 594 616 0.98

7 16 5.3e-05 0.011 17.7 0.2 2 23 720 741 719 741 0.96

8 16 2.9e-06 0.00058 21.7 4.1 1 23 747 769 747 769 0.98

9 16 0.0033 0.66 12.1 0.6 1 23 775 798 775 798 0.97

10 16 0.001 0.21 13.7 1.9 1 23 809 831 809 831 0.98

11 16 1.1e-05 0.0022 19.9 0.6 1 23 844 866 844 866 0.98

12 16 0.02 4 9.6 2.0 1 23 872 894 872 894 0.97

13 16 1.8e-05 0.0035 19.2 0.2 2 23 900 922 899 922 0.96

14 16 0.4 80 5.5 1.8 1 23 930 953 930 953 0.95

15 16 0.27 55 6.0 1.9 2 23 962 984 962 984 0.92

16 16 0.00074 0.15 14.1 2.0 2 23 990 1011 989 1011 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	6.6e-05	0.013	17.4	1.1	2	23	419	440	418	440	0.97
2	16	1.6e-05	0.0032	19.3	1.1	1	23	446	468	446	468	0.98
3	16	6.1e-05	0.012	17.5	0.2	1	23	474	497	474	497	0.98
4	16	4.2e-05	0.0083	18.1	3.5	1	23	512	534	512	534	0.98
5	16	6e-05	0.012	17.5	3.7	1	23	566	588	566	588	0.97
6	16	0.0002	0.04	15.9	3.8	1	23	594	616	594	616	0.98
7	16	5.3e-05	0.011	17.7	0.2	2	23	720	741	719	741	0.96
8	16	2.9e-06	0.00058	21.7	4.1	1	23	747	769	747	769	0.98
9	16	0.0033	0.66	12.1	0.6	1	23	775	798	775	798	0.97
10	16	0.001	0.21	13.7	1.9	1	23	809	831	809	831	0.98
11	16	1.1e-05	0.0022	19.9	0.6	1	23	844	866	844	866	0.98
12	16	0.02	4	9.6	2.0	1	23	872	894	872	894	0.97
13	16	1.8e-05	0.0035	19.2	0.2	2	23	900	922	899	922	0.96
14	16	0.4	80	5.5	1.8	1	23	930	953	930	953	0.95
15	16	0.27	55	6.0	1.9	2	23	962	984	962	984	0.92
16	16	0.00074	0.15	14.1	2.0	2	23	990	1011	989	1011	0.97

Sequence Information

Coding Sequence: ATGTCTGTCAAATTGGACGATTCCGTTTGCCGGGTGTGTTTAAGTTCCTCCGGGAGCATTACAATTTTCGATGATTGTGGCAAAGATGATCAATTTCGTTATTGTACTTCACTTGAGGCCTCCAAAGAGGATGGTCTCCCCTCCAAACTCTGCAAGAAGTGCAACGATCACCTCAAAGTCGCCTACGACTTTCGTTTCCAAGCAATTTATGCTGAGAAATACTTTCGAAAGACCATTTTCTTGCCATCGTTTAAGAAAGAAGACGAAACATCTCATAGCAATGTCGGCGAGGACGATAGAAATGCAAACAATCATTGTATCGATGAACTGGACGAGAATATGGCCGAGATTGATATGTTACTCGCCATCCACACGGAACGCGTTGAAGATGCCAATGACGAGGAAAATAATGACAACGACGACCACGGCTGCGGTGGCGGGGACAACAACAATGAGATGATGGACCCCAGTGAGTTCTTTGATCACGAAAGTGTAGACATAGATGAGAAACAAGTTGAAATCATTGGGATGGAAACATTCGAAAAGGAAAAACGCGAACAAAAAGAGCAGAAGGTTAAGTTGGAAATCGCCAGTGTCCCACCTCCTTTGGTGTCCGTTACTGAGCGTAACACAAGATACGAGATGACATCAGTGGTTGGGCTATCAAGTATACCTTTGGAGTCGCCCCATAACAGCAACCAGAGCAACAATGTGCCACAAACTCATGTTGACATCGATGAAATCCAGCAATTTCCAGATTCAGATAGTTTTGGTGAGTCCATTCAAAATATAACCTTGGAAAACACCAATGGCAGATCTGAGCATCTTGAAATCCAACCTGTCTTGAAAAACGATCCTTCTGGATATGAGTTTAATGTTCCCACAACCATGACGGTGGGCTACGACACGTTTTCAACGTCATCCCAGATTCAGTTCCAACAAATGCCTCCTCTCCAGATAGATTACGAGCAACAGCCATTACAAGAACCTGTCCAAACGAACTCGGAGAGTTATGATTTCCCATCCTATCGAGAATCATTCTCAGCTTATGGCACACAAACTAACGAAATAGTTCCTCATCCACAGCAACCACAAGAAAACATTGAACAGTTCcaggagcagcagcagcaacaacaaatcCCAGACAAATTATCCAATAACAACAATTTCAAGTCTGAGCATTCAATGGAAAGGACAATTCTTGTGAAggcaaaaaaagccaaaaatacAACGTCAAGTCGCAAGGAACGCATAGAATGTAATATTTGCGGAAGTGTCTTCACCCATTTAAATTCCCTGAAAACTCATCTGCTCAAGCACTCGGGGGAGAAACCCTTCAAGTGTGAATTCTGCGATAAGGCTTTTGCCCGCAAAACAGTCCTCAATATTCACCGACGTCTGCACACCGGGGAGAAGCCCTACAAGTGTTCTCTGTGCCCAAGTGCCTTTGTTACCAAGGAAGCTTTGGCGAGACATTTACAAAAGGACCATGTAGAAGAAGTTGGTGCGAATTTCAGGCGTGATAAAGTCTCATACATTTGTTCCATATGCAACAAGTCTCGTTGCTCCAAATACTCCCTCGCCTCTCACATGAAGACGCACTTGAATGAGACAAAGGTGCGGCGAAAGATAGTTCgcaaaagaaaggaaaaaaagcGTGACGAAGTCACATCCCCTGCGGACTTGCCTCTAAAATACTCCTGCAAAATCTGCCACAAAGGCTTCAGCAACAAATGGGAACTCTGCACCCATGCCGAGTCGCACAACATGCATAAGACATTCGAATGTGATGTTTGCCAGAGGACGTTCGATAAGAAATTCCATCTGCTCTATCATCTGCAAACCCACGAAGGTGGTGAGGAATTGGTGAAGGCTAAGGTCAAGCCGAGTGTCGAACAAATGAGTGTCCTCGATAAACCGAAAGAGGAGAAGGCAGATgatcaaattcaaaaaccaattcAAAAACTTCGAGTGTTGAAGCGACGACGGAGACAAAAGGCGACGAAAATTGACTACGAGGAAGAAGAGCAGGACGAGGACGATGAGATGAATCATAATGAAAGTGAGGATGATCAGGGGAGAGAAAAGTCAAGCAAAACTAAATCCACCCGATCACAACGTGAAAATCTGAAGGTACTGCGAACGAGCAGTAAAATTGAGTGTCTCATTTGCCAGGCTGTCTTCACACATCCGACATCCCTGAAAATTCACATGCTCGTCCATTCAGGCGAACGCCCCTACAAATGTGACCACTGTGATAAATCATTTACCAGAAAGACCGTCCTCAATATCCATCGGCGATTGCACACCGGCGAGAAGCCCTACAAGTGTCCGCTCTGTGATAGTGCTCACGTCACAAAGGATGCTTTGATGCGCCACATGTCGAAGGATCACGATGAGGATCGTGAAGCTGATCGGATAAAATTCACCTGCGGCGTCTGCCACAAACCCATGGGCACCAAATACTCCCTGCAAACGCACATGAAGCTCCACGAACAGCGCCAGACCGAGAATACAGCTGAGCTGAATTTCTCTTGCAACATGTGCACCGAATCGTTCGATACGAAAGCCGATTATGCGAAGCATATGCAGGTCCACGACTCGCACAGAAACTTCCAATGTGACATTTGTCAGGTGACTTTCGAGAAGAAATTCAAACTTCTCTTTCACTTGCAAACCCACAAAATCGAGGATCTGCCGTGTAAGAAATGTGGAGAGACTTTTACCATAAGagAAAACCTCATACAACACGTGAAAACAGAACACATCGATCCTCAGAACATGGACTTTCAATGCCCCACCTGCAACATGGGTCAATATGATACTCGGGATCTAAAGTTACACATGTTAAATTGCCACGACGTCGTGATGGGTGAATTGAATTCGTGCGATATGTGCGGAGAGAGTCATTCCACCGCCGCGGAGTACTACAAACATATGCACGACAAACATGATTCAATCAGCAAGACGTGCAATGAGTGCAAGAAGTACTTTGACTCACGAAAAGCATTCGATAAGCACATTCTTACGCATTATATGTAA
Protein Sequence: MSVKLDDSVCRVCLSSSGSITIFDDCGKDDQFRYCTSLEASKEDGLPSKLCKKCNDHLKVAYDFRFQAIYAEKYFRKTIFLPSFKKEDETSHSNVGEDDRNANNHCIDELDENMAEIDMLLAIHTERVEDANDEENNDNDDHGCGGGDNNNEMMDPSEFFDHESVDIDEKQVEIIGMETFEKEKREQKEQKVKLEIASVPPPLVSVTERNTRYEMTSVVGLSSIPLESPHNSNQSNNVPQTHVDIDEIQQFPDSDSFGESIQNITLENTNGRSEHLEIQPVLKNDPSGYEFNVPTTMTVGYDTFSTSSQIQFQQMPPLQIDYEQQPLQEPVQTNSESYDFPSYRESFSAYGTQTNEIVPHPQQPQENIEQFQEQQQQQQIPDKLSNNNNFKSEHSMERTILVKAKKAKNTTSSRKERIECNICGSVFTHLNSLKTHLLKHSGEKPFKCEFCDKAFARKTVLNIHRRLHTGEKPYKCSLCPSAFVTKEALARHLQKDHVEEVGANFRRDKVSYICSICNKSRCSKYSLASHMKTHLNETKVRRKIVRKRKEKKRDEVTSPADLPLKYSCKICHKGFSNKWELCTHAESHNMHKTFECDVCQRTFDKKFHLLYHLQTHEGGEELVKAKVKPSVEQMSVLDKPKEEKADDQIQKPIQKLRVLKRRRRQKATKIDYEEEEQDEDDEMNHNESEDDQGREKSSKTKSTRSQRENLKVLRTSSKIECLICQAVFTHPTSLKIHMLVHSGERPYKCDHCDKSFTRKTVLNIHRRLHTGEKPYKCPLCDSAHVTKDALMRHMSKDHDEDREADRIKFTCGVCHKPMGTKYSLQTHMKLHEQRQTENTAELNFSCNMCTESFDTKADYAKHMQVHDSHRNFQCDICQVTFEKKFKLLFHLQTHKIEDLPCKKCGETFTIRENLIQHVKTEHIDPQNMDFQCPTCNMGQYDTRDLKLHMLNCHDVVMGELNSCDMCGESHSTAAEYYKHMHDKHDSISKTCNECKKYFDSRKAFDKHILTHYM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00894178;
90% Identity: iTF_00694017;
80% Identity: -