Basic Information

Insect: Eupeodes corollae
Gene Symbol: -
Assembly: GCA_945859775.1
Location: CAMAOS010000189.1:193149-196446[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 6.1e-05 0.0079 17.4 1.1 2 23 419 440 418 440 0.97

2 16 1.5e-05 0.0019 19.3 1.1 1 23 446 468 446 468 0.98

3 16 5.6e-05 0.0073 17.5 0.2 1 23 474 497 474 497 0.98

4 16 3.8e-05 0.005 18.0 3.5 1 23 512 534 512 534 0.98

5 16 6.3e-05 0.0081 17.4 3.9 1 23 566 588 566 588 0.97

6 16 0.00018 0.024 15.9 3.8 1 23 594 616 594 616 0.98

7 16 4.9e-05 0.0064 17.7 0.2 2 23 721 742 720 742 0.96

8 16 2.7e-06 0.00035 21.7 4.1 1 23 748 770 748 770 0.98

9 16 0.003 0.39 12.1 0.6 1 23 776 799 776 799 0.97

10 16 0.00095 0.12 13.7 1.9 1 23 810 832 810 832 0.98

11 16 9.9e-06 0.0013 19.9 0.6 1 23 845 867 845 867 0.98

12 16 0.018 2.4 9.6 2.0 1 23 873 895 873 895 0.97

13 16 1.6e-05 0.0021 19.2 0.2 2 23 901 923 900 923 0.96

14 16 0.37 48 5.5 1.8 1 23 931 954 931 954 0.95

15 16 0.25 33 6.0 1.9 2 23 963 985 963 985 0.92

16 16 0.00068 0.088 14.1 2.0 2 23 991 1012 990 1012 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	6.1e-05	0.0079	17.4	1.1	2	23	419	440	418	440	0.97
2	16	1.5e-05	0.0019	19.3	1.1	1	23	446	468	446	468	0.98
3	16	5.6e-05	0.0073	17.5	0.2	1	23	474	497	474	497	0.98
4	16	3.8e-05	0.005	18.0	3.5	1	23	512	534	512	534	0.98
5	16	6.3e-05	0.0081	17.4	3.9	1	23	566	588	566	588	0.97
6	16	0.00018	0.024	15.9	3.8	1	23	594	616	594	616	0.98
7	16	4.9e-05	0.0064	17.7	0.2	2	23	721	742	720	742	0.96
8	16	2.7e-06	0.00035	21.7	4.1	1	23	748	770	748	770	0.98
9	16	0.003	0.39	12.1	0.6	1	23	776	799	776	799	0.97
10	16	0.00095	0.12	13.7	1.9	1	23	810	832	810	832	0.98
11	16	9.9e-06	0.0013	19.9	0.6	1	23	845	867	845	867	0.98
12	16	0.018	2.4	9.6	2.0	1	23	873	895	873	895	0.97
13	16	1.6e-05	0.0021	19.2	0.2	2	23	901	923	900	923	0.96
14	16	0.37	48	5.5	1.8	1	23	931	954	931	954	0.95
15	16	0.25	33	6.0	1.9	2	23	963	985	963	985	0.92
16	16	0.00068	0.088	14.1	2.0	2	23	991	1012	990	1012	0.97

Sequence Information

Coding Sequence: ATGTCTGTCAAATTGGACGATTCCGTTTGCCGGGTGTGTTTAAGTTCTTCCGGGAGCATAACAATTTTTGATGATTGTGGCAAAGATGATCAATTTCGTTATTGTACATCACTTGAGGCCTCCAAAGAGGATGGTCTCCCCTCAAAACTCTGCAAGAAGTGCAACGATCACCTGAAAGTCGCCTACGACTTTCGTTTCCAAGCCATTTATGCCGAAAAATACTTTAGAAAGACCATTTTTCTGCCATCGTTTAAGAAAGAAGACGAAACGTCCCATAGCAATGTCGGCGAGGACGATAGGAATACAAACAATCATTGTATTGATGAACTGGACGAGAATATGGCCGAGATTGATATGTTGCTCGCCATCCACACGGAACGAGTTGAAGATGCCAATGACGAGGAAAATAATGACAACGACGACCACGGCTGCAATGGCGGGGATAACAACAATGAGATGATGGACACCAGCGAGTTCTTTGATCACGAAAGTGTAGACATAGATGAAAAACAAGTTGAAATTATTGGGATGGAAACATTCGAAAAGGAAAAACGAGAACAAAAAGAGCAGAAGGTTAAGTTGGAAATCGCCAATGTCCCACCTCCTTTGGTGTCCGTTACTGAGCGTAACACAAGGTACGAGATGACATCAGCAGTTGGGCTATCAAGTATACCTTTGGAGTCGCCTCATAACAGCAACCATAGCAGCAGTCTGCCTCAAACTCATGTTGACATCGATGAAATCCAGCAATTCCCAGATTCAGATAGTTTCGGTGAGTCTATTCAAAATATAACCTTGGAAAACACCAATGGCAGATCTGAGCATCTTGAAATCCATCCTGTTTTGAAGAACGATCCATCTGGATATGAGTTTAATGTTCCCACAACCATGACAGTGGGTTACGATTCGTTTTCGACGTCATCCCAGATTCAGTTCCAACAAATGCCTCCTCTCCAGATAGATTACGAGCAACAGCCATTACAAGAACCTGTCCAAACGAACTCGGAGAGTTATGATTTCCCATCCTATCAAGAATCATTCTCAACTTATGGCACACAAACTACCGAAATAGTTCCTCATCCACAGACACCACAAGAAAACATTCAACAGTTCCAGCAGCAGCAGCAGCAACAACAAATCCCAGAAAAATTACCCAATAACAACAATTTCAAGTCTGAGCATTCAACGGAAAGGACAATTCTGGCGAAGTCAAAAAAAGCAAAAAATACAACGTCAAGTCGCAAGGAACGCATAGAATGTAATATTTGCGGAAGTGTCTTCACCCATTTAAATTCCCTGAAAACCCATCTGCTCAAGCACTCGGGGGAGAAACCCTTCAAGTGTGAATTCTGCGATAAGGCTTTTGCCCGCAAAACTGTCCTCAATATTCACCGGCGTCTGCACACCGGGGAGAAGCCCTACAAGTGTTCTCTGTGCCCAAGTGCCTTTGTTACCAAGGAAGCTTTGGCGAGACATTTACAAAAGGACCACGTAGAAGAAGTTGGTGCGAATTTCAGGCGTGATAAAGTCTCATACATTTGTTCCATATGCAACAAGTCTCGTTGCTCCAAATACTCCCTCGCCTCTCACATGAAGACACACTTGAATGAGACAAAGGTGCGGCGAAAGATAGTTCGCAAGAGAAAGGAAAAAAAGCGTGACGAAGTCACATCCCCTGCTGACTTGCCTCTGAAATACTCCTGCAAAATCTGTCACAAAGGCTTCACCAACAAATGGGAACTCTGCACCCATGCCGAGTCGCACAACATGCATAAGACATTCGAATGTGATGTTTGCCAGAGGACGTTCGATAAGAAATTCCATCTGCTCTATCATCTGCAAACCCACGAAGGTGGTGAGGAATTGGTGAAGGCTAAGGTCAAACCGAGTGTCGAACAAATGAGTGTCCCCGATAAACCGAAAGAGGAGGAGGCAGATGATCAAATTCAAAAACCGAATCAAAAACTTCGAGTGTTAAAGCGACGACGGAGAAAAAAGGCGACAAAAATTAACTACGAGGAAGAAGAGCAGGACGAGGACGATGAGATGAATCATGATGAAAGTGAGGATGATGATCAGGGGAGAAAAAAGTCAAGCAAAACTAAATCTACCCGATCGCAACGTGAAAATCTGAAGGTATTGCGAACGAGCAGTAAAATTGAGTGTCTCATTTGCCAGGCTGTCTTCACACATCCGACATCCCTGAAAATTCACATGCTCGTACATTCGGGCGAACGCCCCTACAAATGTGACCACTGTGATAAATCATTTACCAGGAAGACCGTCCTCAATATCCATCGACGTTTGCATACCGGCGAGAAGCCCTACAAATGTCCGCTCTGTGATAGTGCTCACGTCACAAAAGATGCTTTGATGCGCCACATGTCGAAGGATCACGATGAGGATCGTGAAGCTGATCGGATAAAATTCACCTGCGGCGTTTGCCACAAACCCATGGGCACCAAATACTCCCTACAAACGCACATGAAGCTCCACGAACAGCGCCAGACGGAGAATACAGCTGAGCTGAATTTCTCTTGCAACATGTGCACCGAGTCGTTCGATACGAAGGCCGATTATGCGAAGCATATGCAGGTCCACGACTCGCACAGAAACTTCCAATGTGACATTTGTCAGGTGACGTTCGAGAAGAAATTCAAACTTCTCTTTCACTTGCAAACCCACAAGATCGAGGATCTGCCGTGTAAGAAATGTGGAGAGACTTTTACCATAAGAGAAAACCTCATACAACATGTGAAAACAGAACACATCGATCCTCAGAACATGGACTTCCAATGCCCCACCTGCAACATGGGTCAATATGATACTCGCGATCTAAAGTTACACATGTTAAATTGCCACGACGTGGTGATGGGTGAATTGAATTCGTGCGATATGTGCGGAGAGAGTCATTCCACCGCCGCGGAGTACTACAAACATATGCACGACAAACATGATTCAATCAGCAAGACGTGCAATGAGTGCAAGAAGTACTTTGACTCACGAAAAGCATTCGATAAGCACATTCTTACGCATTATATGTAA
Protein Sequence: MSVKLDDSVCRVCLSSSGSITIFDDCGKDDQFRYCTSLEASKEDGLPSKLCKKCNDHLKVAYDFRFQAIYAEKYFRKTIFLPSFKKEDETSHSNVGEDDRNTNNHCIDELDENMAEIDMLLAIHTERVEDANDEENNDNDDHGCNGGDNNNEMMDTSEFFDHESVDIDEKQVEIIGMETFEKEKREQKEQKVKLEIANVPPPLVSVTERNTRYEMTSAVGLSSIPLESPHNSNHSSSLPQTHVDIDEIQQFPDSDSFGESIQNITLENTNGRSEHLEIHPVLKNDPSGYEFNVPTTMTVGYDSFSTSSQIQFQQMPPLQIDYEQQPLQEPVQTNSESYDFPSYQESFSTYGTQTTEIVPHPQTPQENIQQFQQQQQQQQIPEKLPNNNNFKSEHSTERTILAKSKKAKNTTSSRKERIECNICGSVFTHLNSLKTHLLKHSGEKPFKCEFCDKAFARKTVLNIHRRLHTGEKPYKCSLCPSAFVTKEALARHLQKDHVEEVGANFRRDKVSYICSICNKSRCSKYSLASHMKTHLNETKVRRKIVRKRKEKKRDEVTSPADLPLKYSCKICHKGFTNKWELCTHAESHNMHKTFECDVCQRTFDKKFHLLYHLQTHEGGEELVKAKVKPSVEQMSVPDKPKEEEADDQIQKPNQKLRVLKRRRRKKATKINYEEEEQDEDDEMNHDESEDDDQGRKKSSKTKSTRSQRENLKVLRTSSKIECLICQAVFTHPTSLKIHMLVHSGERPYKCDHCDKSFTRKTVLNIHRRLHTGEKPYKCPLCDSAHVTKDALMRHMSKDHDEDREADRIKFTCGVCHKPMGTKYSLQTHMKLHEQRQTENTAELNFSCNMCTESFDTKADYAKHMQVHDSHRNFQCDICQVTFEKKFKLLFHLQTHKIEDLPCKKCGETFTIRENLIQHVKTEHIDPQNMDFQCPTCNMGQYDTRDLKLHMLNCHDVVMGELNSCDMCGESHSTAAEYYKHMHDKHDSISKTCNECKKYFDSRKAFDKHILTHYM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00894178;
90% Identity: iTF_00694871;
80% Identity: -