Lacc015495.1
Basic Information
- Insect
- Lerema accius
- Gene Symbol
- grn
- Assembly
- None
- Location
- scaffold1307:387348-490559[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.5e-20 3.3e-16 58.5 4.7 1 35 212 245 212 246 0.98 2 2 3.3e-19 1.1e-15 56.8 7.5 1 35 271 304 271 305 0.97
Sequence Information
- Coding Sequence
- ATGGTTTGTGAGGTCGGAGCGGCGGTCATGGACATGAGCGGAGAGGGCGGGGGCGCGGGGGGTGCGCTGCAGCAGCGGTGGTACGACAGCCGCGTCAACGGCAGCCCGGCGGCCGGTGACGTCAGTTCCGAGGCGAATGGCGACGGGTTCTTCCACTCGCCGCTAGAGGGCGGCCACCACAGTCGCGCCCGATACTACCATCAACAGATGCACGCCCCTTATTCCGCTGCGGTCGGCTCCCATGGTCGAACGCTGGGCGGGAGCAGCGGGCAGGTGTGTCGGCCGCACTTCCACACGCCGCTGCACCCCTGGCTGGACTCCAAGGCGCTGGGCAGCGGCGCGTGGGGCGGCGGCTTCCAGCAAGATGCCGCGCCGGCCGACAAGCCCCTGTCCCCGGCGCAGCACCACCATCCCCATCCCCTCTTCTCCTTCCCCCCTACCCCTCCTAAGGATTCCACTCCCGACTCCGTCGCGGCCGCGGCGCTCGGCCAACAGGACTACCAAGCGGCCGTTGCTCACGCGACGGCGATGAGCGTCGCCTTCATGCAGCAGCAACAGGAGCTACCTCTATGCGGGGACGTCAAGCCCATGATGGGCGCGCCTCCCTCCAAACAACGCGAAGAGGGTCGTGAATGCGTGAACTGCGGCGCGACAAGCACGCCACTGTGGCGGCGCGACGGCACCGGGCACTACTTGTGCAATGCATGCGGCCTCTACTACAAGATGAATGGACAGAATCGACCGTTGATCAAGCCAAAACGAAGATTGGTGAGTTCGCTACAGAGCGCGGCGCGTCGTGCTGGCACCTCGTGCGCGAACTGCAAGACGACAACCACCACGCTATGGCGGCGTAACCAGAATGGTGAACCCGTCTGCAATGCTTGTGGGCTGTACTACAAACTACATAATGTAAATCGGCCATTAACAATGAAGAAAGAAGGCATCCAAACGAGGAACCGGAAGTTAAGCAGCAAAAGCAAGAAGAAGAAAGGGGGCATGGGAATGGGGGGAGGGGCGTGCGCGCTGGCGCTCGGGGGCGTCATGGGAGACATGATCAAACCCCTCGGTGACGCGACGAAGGGCTTCGGGGGGTCCGCCTTCCCTTCCGCTATGGATTTCGGTCAACACCAAGTGGGTCTGGTGCACCCGGCGGCGGCTCACATGTCGCACTGGTACGGCGCCCCACACCAGGGCTTCGCCCCGCCGCCCACGTCACATAACCCCTATCACCATCACCACCTTGCTCAGCTCAATTCTATGACTGGATGGAGGAGCGAGTACACGTGA
- Protein Sequence
- MVCEVGAAVMDMSGEGGGAGGALQQRWYDSRVNGSPAAGDVSSEANGDGFFHSPLEGGHHSRARYYHQQMHAPYSAAVGSHGRTLGGSSGQVCRPHFHTPLHPWLDSKALGSGAWGGGFQQDAAPADKPLSPAQHHHPHPLFSFPPTPPKDSTPDSVAAAALGQQDYQAAVAHATAMSVAFMQQQQELPLCGDVKPMMGAPPSKQREEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLVSSLQSAARRAGTSCANCKTTTTTLWRRNQNGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGGMGMGGGACALALGGVMGDMIKPLGDATKGFGGSAFPSAMDFGQHQVGLVHPAAAHMSHWYGAPHQGFAPPPTSHNPYHHHHLAQLNSMTGWRSEYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00323971; iTF_01207015; iTF_01151726; iTF_01363600; iTF_01488203; iTF_01125101; iTF_00157711; iTF_00824365; iTF_00319376; iTF_00955267; iTF_01143527; iTF_01144969; iTF_00828435; iTF_00954069; iTF_00021881; iTF_01147772; iTF_01150028; iTF_00779934; iTF_00780705; iTF_00236311; iTF_00114597; iTF_00820600; iTF_01312707; iTF_01140604;
- 90% Identity
- -
- 80% Identity
- -