Basic Information

Gene Symbol
grn
Assembly
None
Location
HLhylVes1:4298278-4387904[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.2e-19 5.3e-16 58.3 4.7 1 35 270 303 270 304 0.98
2 2 7.7e-19 1.8e-15 56.6 7.5 1 35 327 360 327 361 0.97

Sequence Information

Coding Sequence
ATGGTGTGTGAGGTCGGTGGCGCGGTCATGGACATGAGCGGAGAgggcggcggggcgggcgcgggcgcgagcgcgCTGCAGCAGCGCTGGTACGAGGGCCGCGTCAACGGCAGTCCGGCCGCCGGCGACGTCAACGCCGAGCCCAATGGAGACGGCTTCTTCCACTCGCCGCTCGAGGGCGGCCACCACAGCCGCGCCCGCTACTACCACCAGCAGATGCACGCCCCTTACTCCGCTGCCGTCGGCTCGCACGGCCGGAGTCTAAGCGGAGGCAGCGGCCAGGTGTGTCGGCCGCACTTCCACACGCCACTGCACCCGTGGCTCGAGTCCAAGGCGCTGAGCGGCGGCGCGTGGGGCGGCGGCTTCCAGCAGGACGCCGCGCCGGCCGACAAGCCGCTGTCCCCGGCGCAGCACCACCACCCGCACCCTCTGTTCTCCTTCCCTCCTACGCCGCCCAAGGACTCGACGCCGGACTCGGTGGCGGCGGCGGCGCTGGGCCAGCAGGACTACCAGGCGGCCGTGGCGCACGCCACCGCCATGAGCGTGGCCTTCATGCAGCAGCAGCAGGAGCTGCCGCTGTGCGGGGACGTCAAGCCCATGATGGGCGCGCCGCCGTCCAAGCAGCGCGAAGGTGCGCAACCGGACTCGTGCCCCCAGGAGTCGAGCCAGCCCTCCGGGGAATACAACGCGCAGTACAACGCCGCCGGCGGCGACTACTACAACTACCAGGGGAAAGGGTATAACGGCACGCAACAGCAGAGCAAGCCGCGACCGAACAAGACGCGAACTAGCGCCGAGGGTCGCGAGTGCGTGAACTGCGGCGCGACGAGCACTCCGCTGTGGCGGCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACTACAAGATGAACGGTCAGAACCGACCACTCATCAAGCCCAAGCGAAGATTGTCGCTACAGAGCGCGGCGCGGCGCGCGGGCACATCATGCGCCAACTGCAAGACCACAACCACCACGCTGTGGAGGCGTAACCAGAACGGAGAGCCCGTCTGCAACGCCTGCGGACTCTACTACAAACTGCATAATGTGAACCGGCCGCTGACAATGAAGAAAGAGGGCATCCAGACCAGAAACCGTAAACTGAGCAGCAAGAGTAAGAAGAAGAAGGGCGGCATGGGCATGGGCGGCGGCGGGGCCTGCGCACTCGCTCTCGGCGGCGTCATGGGCGACATGATCAAACCGCTCGGAGACGCCACCAAAGGATTCGGCGGATCTGCCTTCCCTTCTGCTATGGATTTCGGTCAGCACCAAGTAGGCCTAGTGCACCCGGCGGCGGCGCACATGTCGCACTGGTACGGGGCGCCGCACCAGGGCTTCGCCCCTCCCCCGGCCTCGCACAACCCCTACCATCACCACCATCTAGCGCAACTCAATTCTATGACTGGCTGGAGGAGTGAGTACACGTGA
Protein Sequence
MVCEVGGAVMDMSGEGGGAGAGASALQQRWYEGRVNGSPAAGDVNAEPNGDGFFHSPLEGGHHSRARYYHQQMHAPYSAAVGSHGRSLSGGSGQVCRPHFHTPLHPWLESKALSGGAWGGGFQQDAAPADKPLSPAQHHHPHPLFSFPPTPPKDSTPDSVAAAALGQQDYQAAVAHATAMSVAFMQQQQELPLCGDVKPMMGAPPSKQREGAQPDSCPQESSQPSGEYNAQYNAAGGDYYNYQGKGYNGTQQQSKPRPNKTRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLSLQSAARRAGTSCANCKTTTTTLWRRNQNGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGGMGMGGGGACALALGGVMGDMIKPLGDATKGFGGSAFPSAMDFGQHQVGLVHPAAAHMSHWYGAPHQGFAPPPASHNPYHHHHLAQLNSMTGWRSEYT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00887861;
90% Identity
iTF_00236311;
80% Identity
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