Cnem005468.1
Basic Information
- Insect
- Choreutis nemorana
- Gene Symbol
- grn
- Assembly
- GCA_949316135.1
- Location
- OX438600.1:7737902-7779533[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-19 4.3e-16 58.6 4.7 1 35 195 228 195 229 0.98 2 2 6.2e-19 1.5e-15 56.9 7.5 1 35 252 285 252 286 0.97
Sequence Information
- Coding Sequence
- ATGTGTGGATGTACTATATATTACCTTATCAATTGTCGAACGCTGAGCGGCGGCAGCGGGCAAGTCTGCCGGCCGCACTTTCATACCCCACTGCACCCTTGGTTGGAGTCCAAAGCTTTAAGCGGAGGAGCTTGGGGTAGCGGCTTCCAGCAGGATGCTGGTTCCAACGACAAGCCTCTTTCCCCTGCCCAACATCCTCATCCCCATCCTCTCTTCTCTTTCCCTCCTACCCCTCCCAAGGACTCGACGCCGGACTCGGTGGCCGCGGCGGCTTTGGGGCAGCAGGACTACCAGGCAGCCGTGGCGCACGCCACCGCCATGAGCGTCGCCTTCATGCAGCAGCAGCAGGAGCTGCCTCTGTGCGGGGACGTGAAGCCGATGATGGGGGCGCCGCCGTCCAAGCAGCGGGAAGGTGCGCAGGCGGAGTGCCCCCAGGAGTCGAGCCAGCCCTCCGGGGAATACAACGCGCAATACAATGCCGCCGGCGGCGACTACTACAACTACCAGGGGAAGGGGTTTAGTGGGCAACAGCAAAATAAGCCGCGGCCGAACAAGACGCGGACGAGTGCCGAGGGTCGGGAGTGCGTGAACTGTGGTGCGACAAGCACTCCTCTCTGGCGGAGGGACGGTACCGGGCACTACCTCTGCAACGCCTGCGGACTCTACTACAAAATGAACGGACAGAATCGACCCCTCATCAAGCCTAAGCGAAGATTGTCGCTTCAGAGCGCGGCGCGGAGAGCGGGCACCTCGTGCGCGAACTGCAAGACTACCACCACGACTCTGTGGCGACGCAACCAGAACGGGGAACCCGTCTGCAACGCCTGCGGACTCTACTACAAACTACATAATGTGAACCGACCACTGACTATGAAGAAAGAAGGTATTCAGACGAGGAATCGTAAGCTAAGCAGTAAGAGTAAGAAGAAGAAGGGGGGTATGGGCATGGGGGGCGGCGGGGCATGTGCACTGGCCCTCGGGGGGGTCATGGGGGATATGATCAAACCCCTGGGAGATGCAACCAAAGGCTTCGGAGGCTCGGCCTTCCCACCGACCATGGATTTCGGTCAACACCAAGTTGGCTTGGTGCATCCCGCGGCAGCTCACATGTCTCACTGGTATGGGGCGCCGCACCAGGGCTTCGCCCCACCTCCGACCTCGCACAACCCCTACCATCACCATCATTTAGCGCAGCTAAATTCTATGACTGGCTGGAGGAGTGAATATACGTGA
- Protein Sequence
- MCGCTIYYLINCRTLSGGSGQVCRPHFHTPLHPWLESKALSGGAWGSGFQQDAGSNDKPLSPAQHPHPHPLFSFPPTPPKDSTPDSVAAAALGQQDYQAAVAHATAMSVAFMQQQQELPLCGDVKPMMGAPPSKQREGAQAECPQESSQPSGEYNAQYNAAGGDYYNYQGKGFSGQQQNKPRPNKTRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLSLQSAARRAGTSCANCKTTTTTLWRRNQNGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGGMGMGGGGACALALGGVMGDMIKPLGDATKGFGGSAFPPTMDFGQHQVGLVHPAAAHMSHWYGAPHQGFAPPPTSHNPYHHHHLAQLNSMTGWRSEYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00887861;
- 90% Identity
- iTF_00236311;
- 80% Identity
- -