Basic Information

Insect: Bombyx mandarina
Gene Symbol: grn
Assembly: GCA_003987935.1
Location: NW:63114-176506[-]

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 1.6e-19 2.8e-16 58.3 4.7 1 35 268 301 268 302 0.98

2 2 5.4e-19 9.7e-16 56.6 7.5 1 35 327 360 327 361 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	1.6e-19	2.8e-16	58.3	4.7	1	35	268	301	268	302	0.98
2	2	5.4e-19	9.7e-16	56.6	7.5	1	35	327	360	327	361	0.97

Sequence Information

Coding Sequence: ATGGTGTGTGAGATCGGTGCCGCGGTCATGGACATGAGCGGAGAGGGCGGCGGCGCGGGGGCGAGCGCGCTGCAGCAGCGGTGGTACGAGAGCCGCCTTAACGGCAGCCCGGCCGCCGGCGACGTCAACGCGGAGACCAATGGAGACGGCTTCTTCCATTCTCCGCTCGAAGGGGGCCACCATAGCCGCGCCCGCTACTACCATCAACAGATGCACGCCCCCTACTCGGCCGCTGTCGGTTCGCATGGTCGAACGCTAAGCGGTAGCAGTGGGCAGGTGTGTCGGCCTCACTTCCATACGCCGCTGCATCCCTGGCTCGAGTCTAAGGCGCTGGGGAGCGGGGCGTGGGGAGGGGGCTTCCAACAAGATGGTTCCTCAGGCGACAAACCGCTGTCACCAGCACAACACCCTCATCCCCATCCTTTGTTTTCATTTCCTCCGACTCCTCCGAAAGACTCGACGCCGGACTCTGTGGCTGCGGCGGCTCTCGGTCAACAGGACTACCAGGCCGCGGTAGCGCATGCCACAGCGATGAGCGTCGCCTTCATGCAGCAACAACAAGAGCTGCCCCTCTGCGGAGACGTCAAACCAATGATGGGCGCGCCGCCTTCCAAGCAGCGCGAAGGTGCGCAACCGGACTCTTGCGCTCAGGACACGAGTCAACCCTCCGGGGAATACAACGCTCAGTACAATGCCGCCGGCGGCGACTACTACAACTATCAGGGGAAAGGTTATAGCGGAGCGCAGCAGCAGAACAAGCCGCGACCGAACAAGACGCGAACTAGCGCCGAGGGTCGAGAGTGCGTCAACTGTGGGGCTACGAGCACTCCACTGTGGCGACGAGACGGCACCGGACACTACCTCTGCAACGCCTGCGGTCTCTACTACAAGATGAACGGACAAAACCGACCATTGATCAAGCCTAAACGAAGATTGGTGAGTTCGTTACAAAGTGCGGCCCGACGGGCGGGAACCTCGTGTGCGAACTGTAAGACGACCACAACGACATTATGGAGGAGAAACCAGAACGGAGAACCTGTATGCAACGCTTGCGGACTCTACTACAAGCTACACAACGTAAACCGACCTTTGACGATGAAGAAGGAAGGTATCCAGACAAGAAATAGGAAGTTAAGCAGTAAAAGTAAGAAGAAGAAGGGAGGAATGGGAATGGGCGGTGGGGGAGCTTGTGCTTTAGCGCTCGGCGGAGTCATGGGAGACATGATCAAGCCTCTCGGAGACGCTACCAAAGGATTCGGAGGCTCAGCCTTCCCGTCAGCTATGGATTTCGGTCAGCACCAAGTGGGCTTAGTCCACCCGGCGGCCGCGCACATGTCCCACTGGTACGGAGCGCCCCATCAGGGTTTCGCCCCACCACCGACCTCCCACAACCCTTACCATCACCATCACCTTGCGCAGCTCAATTCTATGACGGGTTGGAGGAGTGAATACACGTGA
Protein Sequence: MVCEIGAAVMDMSGEGGGAGASALQQRWYESRLNGSPAAGDVNAETNGDGFFHSPLEGGHHSRARYYHQQMHAPYSAAVGSHGRTLSGSSGQVCRPHFHTPLHPWLESKALGSGAWGGGFQQDGSSGDKPLSPAQHPHPHPLFSFPPTPPKDSTPDSVAAAALGQQDYQAAVAHATAMSVAFMQQQQELPLCGDVKPMMGAPPSKQREGAQPDSCAQDTSQPSGEYNAQYNAAGGDYYNYQGKGYSGAQQQNKPRPNKTRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLVSSLQSAARRAGTSCANCKTTTTTLWRRNQNGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGGMGMGGGGACALALGGVMGDMIKPLGDATKGFGGSAFPSAMDFGQHQVGLVHPAAAHMSHWYGAPHQGFAPPPTSHNPYHHHHLAQLNSMTGWRSEYT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00887861;
90% Identity: iTF_00828435; iTF_00319376; iTF_00323971; iTF_00955267; iTF_00114597; iTF_01363600; iTF_01488203; iTF_00820600; iTF_01143527; iTF_01207015; iTF_00824365; iTF_00157711; iTF_00954069; iTF_01125101; iTF_01151726; iTF_00021881; iTF_01140604; iTF_01144969; iTF_01147772; iTF_01150028; iTF_00779934; iTF_00780705;
80% Identity: -