Slit000252.1
Basic Information
- Insect
- Spodoptera litura
- Gene Symbol
- grn
- Assembly
- GCA_002706865.1
- Location
- NC:10535881-10628366[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-19 3.5e-16 58.3 4.7 1 35 266 299 266 300 0.98 2 2 5.4e-19 1.2e-15 56.6 7.5 1 35 325 358 325 359 0.97
Sequence Information
- Coding Sequence
- ATGGTGTGTGAGGTCGGATCGGCCATGGACATGAGTGGAGAGGGCGCGGGGTCGGGGGCGAGCGCGCTGCAGCAGCGGTGGTACGAGGGCCGCGTCAACGGCAGCCCCGCCGCCGGCGACGTCAACGCCGACGCCAATGGCGACGGCTTCTTCCACTCCCCGCTGGAAGGCGGTCATCACAGTCGCGCCCGCTACTACCATCAACAAATGCACGCCCCCTACTCCGCCGCAGTCGGCTCGCACGGTCGAACGCTGAGCGGCGGCAGCGGGCAGGTGTGCAGGCCGCACTTCCACACGCCGCTGCATCCCTGGCTAGAGTCCAAGGCACTAAGCGGTGGTGCGTGGGGTAGTGGCTTCCAGCAAGATGCGGCGCAGGCAGACAAACCCTTGTCACCCGCGCAACATCACCACCCACACCCCCTGTTCTCGTTTCCCCCGACGCCGCCGAAGGATTCGACGCCAGACTCCGTGGCGGCAGCAGCGCTCGGTCAGCAGGATTACCAGGCAGCCGTCGCGCACGCCACCGCCATGAGCGTCGCTTTCATGCAGCAGCAGCAGGAGCTGCCACTGTGTGGCGACGTGAAGCCTATGATGGGCGCACCGCCGTCGAAGCAGCGCGAAGGTGCGCAGCCAGACTCGTGCCCCCAGGAGTCGAGCCAGCCCTCCGGGGAATACAACGCGCAGTACAATGCCGCCGGCGGCGACTACTACAACTACCAGGGGAAGGGTTATAGTGGGCAGCAGCAGAGCAAGCCGCGACCGAACAAGACGCGAACTAGCGCCGAGGGACGGGAATGCGTCAACTGCGGGGCGACCAGCACTCCTCTATGGCGACGTGACGGCACGGGACACTACCTCTGCAACGCGTGCGGCCTCTATTACAAGATGAACGGACAGAATCGACCCCTGATCAAGCCCAAGCGAAGATTGGTGAGTTCGCTACAAAGTGCAGCGCGAAGGGCAGGCACCTCCTGTGCGAACTGCAAGACGACGACCACGACGCTATGGCGACGCAACCAAAATGGCGAACCAGTCTGCAACGCGTGCGGCCTTTATTACAAACtacataatGTAAACCGGCCCCTTACGATGAAGAAAGAGGGGATCCAAACGAGAAATCGCAAATTGAGTAGTAAGAGTAAGAAGAAGAAGGGTGGAATGGGCATGGGAGGGGGAGGAGCTTGTGCATTAGCCCTCGGAGGAGTCATGGGAGACATGATCAAGCCCCTAGGAGATGGAACCAAGGGTTTCGGCGGCTCCGCCTTCCCATCAGCCATGGACTTTGGTCAGCACCAAGTTGGTCTCGTCCACCCCGCAGCGGCACACATGTCCCACTGGTACGGAGCACCACATCAGGGCTTCGCTCCTCCACCAGCGTCACACAACCCCTACCATCACCATCACCTCGCGCAGCTCAATTCAATGACTGGCTGGAGGAGTGAGTACACGTGA
- Protein Sequence
- MVCEVGSAMDMSGEGAGSGASALQQRWYEGRVNGSPAAGDVNADANGDGFFHSPLEGGHHSRARYYHQQMHAPYSAAVGSHGRTLSGGSGQVCRPHFHTPLHPWLESKALSGGAWGSGFQQDAAQADKPLSPAQHHHPHPLFSFPPTPPKDSTPDSVAAAALGQQDYQAAVAHATAMSVAFMQQQQELPLCGDVKPMMGAPPSKQREGAQPDSCPQESSQPSGEYNAQYNAAGGDYYNYQGKGYSGQQQSKPRPNKTRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLVSSLQSAARRAGTSCANCKTTTTTLWRRNQNGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGGMGMGGGGACALALGGVMGDMIKPLGDGTKGFGGSAFPSAMDFGQHQVGLVHPAAAHMSHWYGAPHQGFAPPPASHNPYHHHHLAQLNSMTGWRSEYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00887861;
- 90% Identity
- iTF_00236311;
- 80% Identity
- -