Pxut005535.1
Basic Information
- Insect
- Papilio xuthus
- Gene Symbol
- grn
- Assembly
- GCA_000836235.1
- Location
- NW:6258100-6348546[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-19 3.2e-16 58.3 4.7 1 35 267 300 267 301 0.98 2 2 6.9e-19 1.1e-15 56.6 7.5 1 35 326 359 326 360 0.97
Sequence Information
- Coding Sequence
- ATGGTTTGTGAGGCCTTGGCGGTCATGGACATGAGTGGCGAGGGCGGCGCGGGGgccggcgcgggcgcgggcgctcTGCAGCAGCGCTGGTACGATGGCCGCGTCAACGGCAGCCCGGCCGCCGGCGACGTGGGCGATGCCAATGCCGACGGCTTCTTCCACTCGCCGCTAGAGGGTGGACACCACAGCCGCGCGCGGTACTACCACCAGCAAATGCACGCCCCATACTCCGCCGCTGTCGGATCGCACGGTCGAACGTTAAGCGGCGGCAGCGGGCAGGTGTGCCGGCCGCACTTTCATACGCCGCTGCACCCCTGGCTGGACTCGAAGGCACTGGGCGGTGGCGCGTGGGGAGGCGGCTTCCAGCAGGACGGCGCGCAAGCCGACAAGCCACTCTCTCCCGCGCAGCACCACCATCCACACCCGCTCTTCTCCTTCCCTCCCACTCCCCCCAAGGATTCGACGCCGGACTCGGTGGCGGCTGCAGCGCTGGGCCAACAGGACTACCAGGCAGCCGTGGCGCACGCAACCGCCATGAGCGTGGCCTTCATGCAGCAGCAGCAGGAGCTGCCGCTGTGCGGGGACGTCAAGCCCATGATGGGCGCGCCGCCCAGCAAGCAGCGCGAAGGTGCGCAACCCGACTCGTGCCCCCAGGACGCGAGCCAGCCCTCCGGGGAGTACAACGCGCAGTACAATGCCGCCGGCGGCGACTACTACAGCTACCAGGGCAAGGGCTATAGCCAGCAGCAGAGCAAGCCGCGCCCCAACAAGACGCGCACGAGCGCCGAGGGTCGAGAGTGCGTGAACTGTGGAGCGACAAGTACGCCGCTGTGGCGACGCGACGGCACCGGACACTACCTCTGCAACGCGTGCGGACTCTACTACAAGATGAACGGACAGAACAGGCCTCTAATCAAGCCAAAGCGAAGATTGGTGAGTTCACTGCAGAGCGCTGCGCGACGAGCGGGCACCTCGTGCGCCAACTGCAAGACTACCACAACGACACTGTGGAGACGCAACCAGAACGGCGAGCCAGTCTGCAACGCCTGCGGACTCTACTACAAACTACATAATgtaAACAGACCATTGACGATGAAGAAAGAAGGAATTCAAACGCGAAATCGCAAACTGAGCAGTAAGAGTAAAAAGAAGAAAGGGGGAATGGGCATGGGGGGCGGAGGAGCGTGTGCGCTCGCACTCGGAGGTGTCATGGGAGACATGATAAAGCCGCTCGGAGATGCCACTAAAGGTTTCGGCGGATCAGCGTTTCCCTCCGCAATGGACTTtgGTCAACACCAAGTGGGTCTGGTGCACCCGGCGGCGGCTCACATGTCACATTGGTACGGCGCGCCGCACCAGGGCTTCGCCCCGCCGCCCGCCTCACACAATCCTTACCACCATCATCACCTCGCGCAGCTCAACTCTATGactGGCTGGAGGAGTGAGTACACGTGA
- Protein Sequence
- MVCEALAVMDMSGEGGAGAGAGAGALQQRWYDGRVNGSPAAGDVGDANADGFFHSPLEGGHHSRARYYHQQMHAPYSAAVGSHGRTLSGGSGQVCRPHFHTPLHPWLDSKALGGGAWGGGFQQDGAQADKPLSPAQHHHPHPLFSFPPTPPKDSTPDSVAAAALGQQDYQAAVAHATAMSVAFMQQQQELPLCGDVKPMMGAPPSKQREGAQPDSCPQDASQPSGEYNAQYNAAGGDYYSYQGKGYSQQQSKPRPNKTRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLVSSLQSAARRAGTSCANCKTTTTTLWRRNQNGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGGMGMGGGGACALALGGVMGDMIKPLGDATKGFGGSAFPSAMDFGQHQVGLVHPAAAHMSHWYGAPHQGFAPPPASHNPYHHHHLAQLNSMTGWRSEYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00887861;
- 90% Identity
- iTF_00236311;
- 80% Identity
- -