Labn010407.1
Basic Information
- Insect
- Leptomastidea abnormis
- Gene Symbol
- PAXBP1
- Assembly
- GCA_030522805.1
- Location
- JAPYZE010003968.1:1-1948[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-18 3.4e-14 54.4 0.2 80 272 4 163 1 165 0.91 2 2 0.35 3.9e+03 -1.5 0.0 173 193 199 218 179 236 0.56
Sequence Information
- Coding Sequence
- gaAAATGCTGAACTTGAGAGATCAAAATGGTACAACGCATTAATATTATATGCATTAGACGCTTCGGAAACTGAAGAATCTTTACGTTCCGATCCGGATGTTCGACTGATACCATTAtcaatagaaaaaattgtaattccaaaattaaaaagtattgttgaaaaaatttgggatCCTATGTCAACTACACAAACTCTACGTTTAGTTGGAATTATCAACCGTTTAATTAGAGAGTATCCAAACTTAAATGAGACAAGTAAACAGTTGGAAGAAttgttcaacaaaattttagaaaaaattcaaacagCTGTGGAAAATGACGTTTTTATACCAATATTCCCTAATCAGATGGATACAAAACATCCATTTTTTCAACGTCAATTTGCCATGGCCATGAAATTACTTCGAAATGTATTAAGTTTGCAAGGCATAATTGGAGATAATATGCTTAAAAATGTTGGACTAGGATCATTGTTAAATAGGTATCTTATAGCTGGATTGAGAGTGTCAAATCCAGTAGATGCATTGGTTAAAGCCAACATGatCATGAGTATATTACCGAGTGCTTGGTTGCAAGGAGGAACAATTgatcatttaaaaatgtttgcagATGTAATACAACATCTTAGCCAACAATTAGATCAAGCTAATCCTGCTcataatGAAGCATGGGAATACTCCAAGTCTATCTTAAAGATAATCAAACCTCTGTAA
- Protein Sequence
- ENAELERSKWYNALILYALDASETEESLRSDPDVRLIPLSIEKIVIPKLKSIVEKIWDPMSTTQTLRLVGIINRLIREYPNLNETSKQLEELFNKILEKIQTAVENDVFIPIFPNQMDTKHPFFQRQFAMAMKLLRNVLSLQGIIGDNMLKNVGLGSLLNRYLIAGLRVSNPVDALVKANMIMSILPSAWLQGGTIDHLKMFADVIQHLSQQLDQANPAHNEAWEYSKSILKIIKPL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00690177; iTF_00969613; iTF_00691087; iTF_01219092; iTF_00287229; iTF_00691935;
- 90% Identity
- -
- 80% Identity
- -