Ekie003082.1
Basic Information
- Insect
- Eupelmus kiefferi
- Gene Symbol
- PAXBP1
- Assembly
- GCA_030522745.1
- Location
- JAPYZB010001538.1:9862-14185[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-22 2.8e-18 68.6 0.4 79 272 3 164 1 166 0.93 2 2 0.69 1.8e+04 -2.9 0.0 134 159 207 232 197 237 0.54
Sequence Information
- Coding Sequence
- GAAAGCGCTGATCTTGAAAGATCGAAATGGTACAACTCATTACTTTTATACGCACTAGATGTAAAGGAGACTGAGGAATCTCTTCGCTGCGATCCAGACGTACGATTGATTCCATCggcaattgaaaaaattattctaccaAAATTAACAAcaattgTTGAGAAAATTTGGGACCCTATGTCGACGTCACAAACGCTTCGATTAGTTGGAATAACCAATCGCTTGATTAGAGATTATCCAAACTTAAACGAAAATAGTAAACAGTTGGAAATGCTTTTTAATgctattttggaaaaaattcaagcagCTGTTgaaaatgatgtttttattcCGATATTTCCTAAGAcagTGATGGAcccaaaacatcaattttttcaaagacaGTTTGCCATGGCTATAAAATTACTCCGAAACTTGCTTAGTTGGCAGGGGTTAATTGGCGATACAAGGCTAAAAAATATCGCTTTGGGATCGCTATTAAACAGATACCTCCTCGCTGGGTTGCGAGTCTCGTCTCCCGTAGATGCTTTACTCAAAGCTAATAtgattatgagCACGTTGCCCCGAGCATGGCTTCAGGGAGAAACAATCGACCATTTAAATATGTTTGctgtattaattaaacaattaagcGAACAACTCGATCAAGCTAATCCTGCACACAAtgaAGCATGGGAATACTCTAAGTCTATCTTAAAGATAATCAAACCTCTGTAA
- Protein Sequence
- ESADLERSKWYNSLLLYALDVKETEESLRCDPDVRLIPSAIEKIILPKLTTIVEKIWDPMSTSQTLRLVGITNRLIRDYPNLNENSKQLEMLFNAILEKIQAAVENDVFIPIFPKTVMDPKHQFFQRQFAMAIKLLRNLLSWQGLIGDTRLKNIALGSLLNRYLLAGLRVSSPVDALLKANMIMSTLPRAWLQGETIDHLNMFAVLIKQLSEQLDQANPAHNEAWEYSKSILKIIKPL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00877851;
- 90% Identity
- iTF_00690177;
- 80% Identity
- -