Eann006411.1
Basic Information
- Insect
- Eupelmus annulatus
- Gene Symbol
- PAXBP1
- Assembly
- GCA_900480025.1
- Location
- UDEW01011267.1:1-1350[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-22 9.7e-19 68.4 0.4 79 272 3 164 1 166 0.93 2 2 0.67 5.4e+03 -2.9 0.0 134 158 207 231 196 237 0.55
Sequence Information
- Coding Sequence
- GAAAGCGCTGATCTTGAAAGATCGAAATGGTACAACTCATTACTTTTATACGCACTAGATGTAAAGGAGACTGAGGAATCTCTTCGCTGCGATCCAGACGTACGGTTGATTCCATCggcaattgaaaaaattgttctacCAAAATTAACAAcaatTGTTGAGAAAATTTGGGACCCTATGTCGACGTCACAAACGCTTCGATTAGTTGGAATAACCAATCGCTTGATTAGAGATTATCCCAACTTAAACGAAAATAGTAAACAGTTGGAAATGCTTTTTAACgctattttggaaaaaattcaagcaGCGGttgaaaatgatgtttttattcCGATATTTCCTAAGACAGTGATGGACccaaaacatcaattttttcaaagacagTTTGCCATGGCTATAAAATTACTCCGAAACTTGCTTAGTTGGCAGGGTTTAATTGGCGATACAAGGCTAAAAAATATCGCTTTGGGATCGCTATTAAACAGATACCTCCTCGCTGGATTGCGAGTCTCGTCTCCAGTAGATGCTTTAGTCAAAGCTAATAtgattatgaGCACGTTGCCCCGAGCTTGGCTTCAGGGCGAAACAATCGACCATTTAAATATGTTTgctgtattaattaaacaattaagcGAACAACTCGATCAAGCTAATCCTGCACACAAtgaaGCTTGGGAATACTCTAAGTCTATCTTAAAGATAATCAAACCTCTGTAA
- Protein Sequence
- ESADLERSKWYNSLLLYALDVKETEESLRCDPDVRLIPSAIEKIVLPKLTTIVEKIWDPMSTSQTLRLVGITNRLIRDYPNLNENSKQLEMLFNAILEKIQAAVENDVFIPIFPKTVMDPKHQFFQRQFAMAIKLLRNLLSWQGLIGDTRLKNIALGSLLNRYLLAGLRVSSPVDALVKANMIMSTLPRAWLQGETIDHLNMFAVLIKQLSEQLDQANPAHNEAWEYSKSILKIIKPL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00877851;
- 90% Identity
- iTF_00691087; iTF_01219092; iTF_00691935;
- 80% Identity
- iTF_00691087;