Msti014521.1
Basic Information
- Insect
- Megastigmus stigmatizans
- Gene Symbol
- PAXBP1
- Assembly
- GCA_900490015.1
- Location
- UELV01023757.1:1-3628[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.8e-21 1.2e-16 62.1 0.3 80 272 4 164 1 166 0.92 2 2 0.29 4.9e+03 -2.3 0.1 184 190 210 216 184 237 0.46
Sequence Information
- Coding Sequence
- GAAAGTGCTGAACTCGAGAGGTCAAAATGGTTCAATTCCTTAATTTTATACGCCTTAGATACAAGAGAGACTGAAGAATCCTTACGACGCGATCCTGACGTACGATTGATACCGTCCACAATCGAAAAAATAGTAGTTCCAAAATTAACAACTCTTGTTGAGAGAATTTGGGACCCAATGTCGACGTCACAGACACTAAGATTGGTCGGAATAATTAATCGTCTAATCAGAGATTACCCTAACTTGAATGAATCAAGTAAACAGCTGGAAGCACTTTTCAACGCTATTATAGATAAGATTCAAACAGCGGTGGAAAATGATGTATATATTCCAATATTCCCTAAACAAGTTATGGATCCAAAACATCCATTCTTTCAACGTCAATTTGCTATGGCCGTTAAATTATTGCGAAATTTATTGAGTTGGCAGGGCTTAATTGGtgatactaaattaaaaaacattgcCTTAGGAGCGTTATTAAATAGATATTTACTCGCTGGATTACGAGTATCAAATCCTGCAGATGCTCTTGTTAAAGCTAATACGattatgAGTACACTGCCGCGAGCATGGCTGCAGGGAGAAACAATCGACCATTTAAAGATGTTTGCGTCTTTAATTCAACAACTTAGCGAACAATTGGATCAAGCTAATCCAGCTCACAaCGACGCATGGGAATACTCCAAGTCTATCTTGAAGATAATCAAACCCCTGTAA
- Protein Sequence
- ESAELERSKWFNSLILYALDTRETEESLRRDPDVRLIPSTIEKIVVPKLTTLVERIWDPMSTSQTLRLVGIINRLIRDYPNLNESSKQLEALFNAIIDKIQTAVENDVYIPIFPKQVMDPKHPFFQRQFAMAVKLLRNLLSWQGLIGDTKLKNIALGALLNRYLLAGLRVSNPADALVKANTIMSTLPRAWLQGETIDHLKMFASLIQQLSEQLDQANPAHNDAWEYSKSILKIIKPL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00877851;
- 90% Identity
- -
- 80% Identity
- -