Basic Information

Insect: Laspeyria flexula
Gene Symbol: -
Assembly: GCA_905147015.1
Location: LR989976.1:2773749-2775752[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0012 0.084 13.8 3.5 1 23 96 118 96 118 0.96

2 15 0.037 2.6 9.1 0.2 2 23 146 168 145 169 0.91

3 15 0.0024 0.17 12.8 2.9 1 23 188 211 188 211 0.96

4 15 5.4e-05 0.0037 18.0 0.4 1 23 216 239 216 239 0.96

5 15 0.0013 0.088 13.7 0.8 1 23 244 267 244 267 0.96

6 15 0.00054 0.037 14.9 0.3 2 23 270 292 270 292 0.96

7 15 0.03 2.1 9.4 1.6 2 20 300 318 299 320 0.93

8 15 0.0023 0.16 12.9 2.8 1 23 372 395 372 395 0.97

9 15 4.2 2.9e+02 2.6 0.0 2 23 468 491 467 491 0.86

10 15 1.6e-05 0.0011 19.7 0.3 3 23 498 519 497 519 0.93

11 15 0.0066 0.46 11.5 3.0 2 23 524 546 523 546 0.93

12 15 0.00024 0.017 16.0 5.0 1 23 551 574 551 574 0.96

13 15 0.00011 0.0074 17.1 5.0 1 23 578 601 578 601 0.97

14 15 0.00014 0.0099 16.7 0.3 2 23 608 629 607 629 0.96

15 15 1.7e-05 0.0011 19.7 2.2 1 23 635 657 635 657 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0012	0.084	13.8	3.5	1	23	96	118	96	118	0.96
2	15	0.037	2.6	9.1	0.2	2	23	146	168	145	169	0.91
3	15	0.0024	0.17	12.8	2.9	1	23	188	211	188	211	0.96
4	15	5.4e-05	0.0037	18.0	0.4	1	23	216	239	216	239	0.96
5	15	0.0013	0.088	13.7	0.8	1	23	244	267	244	267	0.96
6	15	0.00054	0.037	14.9	0.3	2	23	270	292	270	292	0.96
7	15	0.03	2.1	9.4	1.6	2	20	300	318	299	320	0.93
8	15	0.0023	0.16	12.9	2.8	1	23	372	395	372	395	0.97
9	15	4.2	2.9e+02	2.6	0.0	2	23	468	491	467	491	0.86
10	15	1.6e-05	0.0011	19.7	0.3	3	23	498	519	497	519	0.93
11	15	0.0066	0.46	11.5	3.0	2	23	524	546	523	546	0.93
12	15	0.00024	0.017	16.0	5.0	1	23	551	574	551	574	0.96
13	15	0.00011	0.0074	17.1	5.0	1	23	578	601	578	601	0.97
14	15	0.00014	0.0099	16.7	0.3	2	23	608	629	607	629	0.96
15	15	1.7e-05	0.0011	19.7	2.2	1	23	635	657	635	657	0.97

Sequence Information

Coding Sequence: ATGACTAATCAGACGATCTTACGAGGAAAGTGGAAGAGGACAATAGTTTTAGACTATACACACTTGAGCGAACTGAATTTTAAACTGAACTTTACTAACCAACAAGAAACACGAAGTAAAAATAACCAAAATACAATTATAGAGGTACATTCATACAGCAAGGAACGTTTCTTTTCAGATGAATTGCCAGACCCGAACCGAGGATGTATATCTGAAACGAGACGGAACAATCTCAAAGTACTGTTCGACCACACGTCGATAATGCCATTCAAATGGCGGGGCAAATATCTTTGCTTTTATTGTGGGCAAAACTACACACAATACACTGAATTTAAAAAACACACCAAATCACACGGACAATGCAACACGCAAGATTACTCACTGAAACTAATCAAAGGAAACAATATAGAAATTAAAATCGATGTTTCGGAGATCGTTTGTGAAATTTGCAACGAAAATTTTAATAGATTTGAGGAAATAATCGATCATTTGATCGGTAAACATCATTTGGAATACAACAGACATATTGATGTTCCGTTCCAGGAGTATCGATTGGTCGATTTCAAGTGCCTACATTGCGAAAAGCAGTTTTCTTATTTCGGTTATTTAGTGAATCACGTGAATAATATGCATCCTCAAAATTGCTTCATTTGTAATGATTGCGGTGGGCGTTTTAATAAAAAGAGGGATTTGGCTATTCATATAAGGAATTATCATCGCGTTGGAGGTTATCCTTGTGACTCGTGCGTGCAAACATTTGATACGTTCCAATCGTTACGTCGACATCAAAATAACATACATTTTCGAGAGTGTAAAAGTTGCGGAGGGAAGTTTGCTTCCCTCTCGCTTCTTCAAAAACATTTACAAAGCGAACATCCTCACGATGAAAGTAATATGAAGTGTAGATATTGCTCCAAAGAATTCCATTCATCTATAGGTCTTAGGCAACACACAAGCAAATGTAAAGTCAAAGTTTTATTGCGAACAGAACCTGAGACGTTCCCAGATGATAACTTTGAGCCGCGAAAGAAGCAGAATATATTACAAATTCGTCAAAATATACAATGTGTTCTAAACATGTCTACTGCTATGCCATTTAAATTCTTTTCCAAGTACTCTTGCTTTTATTGCTCGAAGAAATTCTTTGAATTTGACGACCTACGTCAACACACAAATATGGAACATCCAGTATGTGATTTGAAACAGAAATGTATGAAAAAGTGCAAAGGCGAAAGAATTACAGTCAAAGTTGATATCGCGGCTTTAGCTTGTAAGGTTTGCTGCATTCCTATGCAAGATTTAGAAGCACTTATTAATCATTTGATTGTGGTACATAAAGCTAACTATGATAAGTCAATTACTGGATGTTTGGAACCTTTTAGGATCATAAAAGACAATATGCCCTGTCCTATATGCCCTGATAAGATATTTAGATACTTTGGCATTCTTTTACGTCATGTGAACGCAGAGCATAGCAATAATAACAGAATTTGTGACTTCTGTGGCAGGAGTTTCCGTAACGCAGCTAATTTGAATGTACATTTAACTTATTCGCATACAGGTGCGTGTGAATGCGATGTTTGCGGTGTTAAATATAAAAACCAATGGTGTTTGGCTCGGCATAAAGCGAAAACACATAACGCAAAAGATCACAAGTGCCCGAAATGTCCAGAATCTTTTAACTCCCAGTATCATAAACAAAAGCATCTAATTAAAATGCATAATATTGGACACAAATGTGATTTTTGCGATAAAATGTTTACAAGGAATTCGTTTATGAAGGATCATGTTAGAAGAACTCATTTGAAAGAGAAGAATGTGCCTTGTTCGATATGTAACGAGAAATTCTTTGACAATTATCTGTTGAGAATGCATATGGTGAAACATGAGGGGGACAGAAAGTTCTGCTGCTCGGTTTGCGGCAAGACTTTTTTGCGTAGAAGTAACTTGGCCTCACATATGGATATGCATAAAAAGTATGGCCACGTTCAGTTGCCGATTTGA
Protein Sequence: MTNQTILRGKWKRTIVLDYTHLSELNFKLNFTNQQETRSKNNQNTIIEVHSYSKERFFSDELPDPNRGCISETRRNNLKVLFDHTSIMPFKWRGKYLCFYCGQNYTQYTEFKKHTKSHGQCNTQDYSLKLIKGNNIEIKIDVSEIVCEICNENFNRFEEIIDHLIGKHHLEYNRHIDVPFQEYRLVDFKCLHCEKQFSYFGYLVNHVNNMHPQNCFICNDCGGRFNKKRDLAIHIRNYHRVGGYPCDSCVQTFDTFQSLRRHQNNIHFRECKSCGGKFASLSLLQKHLQSEHPHDESNMKCRYCSKEFHSSIGLRQHTSKCKVKVLLRTEPETFPDDNFEPRKKQNILQIRQNIQCVLNMSTAMPFKFFSKYSCFYCSKKFFEFDDLRQHTNMEHPVCDLKQKCMKKCKGERITVKVDIAALACKVCCIPMQDLEALINHLIVVHKANYDKSITGCLEPFRIIKDNMPCPICPDKIFRYFGILLRHVNAEHSNNNRICDFCGRSFRNAANLNVHLTYSHTGACECDVCGVKYKNQWCLARHKAKTHNAKDHKCPKCPESFNSQYHKQKHLIKMHNIGHKCDFCDKMFTRNSFMKDHVRRTHLKEKNVPCSICNEKFFDNYLLRMHMVKHEGDRKFCCSVCGKTFLRRSNLASHMDMHKKYGHVQLPI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00282645; iTF_00281613; iTF_00282644; iTF_01166941; iTF_00441770; iTF_00636748; iTF_01360909; iTF_01152405; iTF_00795034;
90% Identity: iTF_01152405;
80% Identity: -