Basic Information

Insect: Eilema caniola
Gene Symbol: -
Assembly: GCA_949126895.1
Location: OX421485.1:17550583-17552734[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00035 0.055 15.7 3.2 1 23 59 81 59 81 0.96

2 15 0.21 33 6.9 0.0 2 23 109 131 108 131 0.85

3 15 0.002 0.31 13.3 2.0 1 23 151 174 151 174 0.96

4 15 8e-05 0.012 17.7 0.3 1 23 179 202 179 202 0.96

5 15 0.00041 0.063 15.4 1.1 1 23 207 230 207 230 0.96

6 15 0.00027 0.042 16.0 1.0 2 23 233 255 233 255 0.97

7 15 0.032 5 9.5 1.6 2 20 263 281 262 283 0.93

8 15 5.2e-05 0.0081 18.3 2.7 1 23 335 358 335 358 0.97

9 15 1.5 2.4e+02 4.2 0.0 2 23 431 454 430 454 0.88

10 15 1.1e-05 0.0016 20.4 0.2 3 23 461 482 460 482 0.94

11 15 0.0019 0.3 13.3 2.8 2 23 487 509 486 509 0.94

12 15 0.00041 0.064 15.4 5.5 1 23 514 537 514 537 0.96

13 15 2.2e-05 0.0035 19.4 4.8 1 23 541 564 541 564 0.97

14 15 0.00015 0.024 16.8 0.3 2 23 571 592 570 592 0.96

15 15 3.9e-06 0.00061 21.8 0.3 1 23 598 620 598 620 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00035	0.055	15.7	3.2	1	23	59	81	59	81	0.96
2	15	0.21	33	6.9	0.0	2	23	109	131	108	131	0.85
3	15	0.002	0.31	13.3	2.0	1	23	151	174	151	174	0.96
4	15	8e-05	0.012	17.7	0.3	1	23	179	202	179	202	0.96
5	15	0.00041	0.063	15.4	1.1	1	23	207	230	207	230	0.96
6	15	0.00027	0.042	16.0	1.0	2	23	233	255	233	255	0.97
7	15	0.032	5	9.5	1.6	2	20	263	281	262	283	0.93
8	15	5.2e-05	0.0081	18.3	2.7	1	23	335	358	335	358	0.97
9	15	1.5	2.4e+02	4.2	0.0	2	23	431	454	430	454	0.88
10	15	1.1e-05	0.0016	20.4	0.2	3	23	461	482	460	482	0.94
11	15	0.0019	0.3	13.3	2.8	2	23	487	509	486	509	0.94
12	15	0.00041	0.064	15.4	5.5	1	23	514	537	514	537	0.96
13	15	2.2e-05	0.0035	19.4	4.8	1	23	541	564	541	564	0.97
14	15	0.00015	0.024	16.8	0.3	2	23	571	592	570	592	0.96
15	15	3.9e-06	0.00061	21.8	0.3	1	23	598	620	598	620	0.98

Sequence Information

Coding Sequence: ATGTTCATTTTCATGCTGTTTATTATCTTGACAACAGCATGTTTCAATTCCATAGATCTTAGCTTTGATGAATTGCCAGGCCCGTACGGAGGCTGTACCTCTGAAAGGAGACGGAAAAATCTGAAAATTCTTTTTGACCACACCTCCATAATGCCTTTCAAATGGCGGGGCAAATACCTCTGCTTCTATTGCGGCAAGAACTACACCGAATACTCAGAGTTTAAAAAACATACGAAATCTCACGGCTTATGTAACACTCAAGATTACTCCCTAAAGCTAATAAAAGGCaacaatattgaaattaaaatcgaTGTATCGGAAATCGTTTGTGATATCTGTAACGAAACTTTTAACCTGTTCGAAGAAATCATCGATCATTTAATCGGTAAACATCAGTTAGAATACAACAAAAATATCGATGTACCGTTTCAGGAGTATCGATTAGTTGATTTTAAATGCCTTCATTGCGAAGAGAGTTTCTCTTACTTCGGATATTTAGTAACACATGTCAATAACATGCATCCGCAAAATTGCTTCATTTGCGACGACTGTGGTGGTCGCTTTAATAAAAAGAGGGATCTAGCTATTCATATAAGGAATTATCACCGTGTGGGAGGCTATCCTTGTGATCTTTGCTTACAGAGTTTCGATACCTATCAGTCACTACGAAGGCATCAAAACAATACGCATTTCAGACAATGCAAAAGCTGCGGTTCCAAATTTGCCTCTTTATCTCTTTTACAAAAACATTTGAAATCAGAACATCCTTATGATGAAAGTAATATGAAGTGTCGTTACTGTTCAAAAGAATTCCATTCATCCATTGGGCTAAGACAGCATACAAGTAAATGTAAAGTGAAAATGATTTCGCAAGCCGAACCACAGTCTTTCGTAGAAGACAATTTAGAACCgagaaaaaaacaaaacattctaCAAATTCGtcaaaatatacaatgtgttcTAAACATGTCGACAGCAGTTCCTTTCAAattcttttcaaaatattcctGCTTTTACTGCTCAAAGAAGTTCTCCGATTTCGACGATTTACGACAGCATACGAGCACTGAACATCCTATATGCGATTTGAAACAGAAatgtatgaaaaagtgcaaaGGCGAGCGAATAAATGTCAAGATTGATACTTCAGTTTTAGCCTGTAAACTTTGCTGTCTTCCAATGCAGgatttagaaactttaatcacCCATTTAGTAGACGTACACAAAGCTAACTATGACAAATCCATTAGCGGATGTCTCGAGCCTTTTAGGATCATTAAAGACAATATACCGTGTCCTATATGTCCAGATAAGGTGTTTCGTTATTTCGGAATCTTACTACGTCATGTTAACGCAGAGCATAGCAATAATAACAGGATTTGTGACTTCTGCGGTCGCAGTTTTCGAAACGCAGCTAACTTAAACGTACATATAACGTATTCTCACACAGGCTCCTGTGAATGCGATGTCTGCGGTATCAAATATAAGAACCAATGGTGCTTAGCTCGACATAGGGCTAAATCTCATAACGCGAAAGACCACAAATGTCCGAAATGTCCAGAGACTTTCAATTCACAGTATCATAAACAGAAGCACTTGATTAAAACGCATAATATTGGTCATAAATGTGATTACTGTGATAAGATGTTCACAAGGAATTCTTTTATGAAAGATCACGTTAGACGAACTCATTTGAAGGAGAAGAATGTCCCTTGTTCTATTTGTAACGAGAAATTTTTCGATAATTACCTTTTAAGGATGCATATGGTGAAGCATGAAGGTGACAGGAAATTTAGCTGTACCGTCTGTGGTAAAGCATTCTTGAGGCGCAGTAATTTGGCATCGCACATGGAAATGCATAAGAAATATGGGCATGTTCAGTTGTAA
Protein Sequence: MFIFMLFIILTTACFNSIDLSFDELPGPYGGCTSERRRKNLKILFDHTSIMPFKWRGKYLCFYCGKNYTEYSEFKKHTKSHGLCNTQDYSLKLIKGNNIEIKIDVSEIVCDICNETFNLFEEIIDHLIGKHQLEYNKNIDVPFQEYRLVDFKCLHCEESFSYFGYLVTHVNNMHPQNCFICDDCGGRFNKKRDLAIHIRNYHRVGGYPCDLCLQSFDTYQSLRRHQNNTHFRQCKSCGSKFASLSLLQKHLKSEHPYDESNMKCRYCSKEFHSSIGLRQHTSKCKVKMISQAEPQSFVEDNLEPRKKQNILQIRQNIQCVLNMSTAVPFKFFSKYSCFYCSKKFSDFDDLRQHTSTEHPICDLKQKCMKKCKGERINVKIDTSVLACKLCCLPMQDLETLITHLVDVHKANYDKSISGCLEPFRIIKDNIPCPICPDKVFRYFGILLRHVNAEHSNNNRICDFCGRSFRNAANLNVHITYSHTGSCECDVCGIKYKNQWCLARHRAKSHNAKDHKCPKCPETFNSQYHKQKHLIKTHNIGHKCDYCDKMFTRNSFMKDHVRRTHLKEKNVPCSICNEKFFDNYLLRMHMVKHEGDRKFSCTVCGKAFLRRSNLASHMEMHKKYGHVQL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00869876;
90% Identity: iTF_00441770; iTF_00281613; iTF_00282644; iTF_00282645; iTF_01360909; iTF_00795034; iTF_01166941;
80% Identity: -