Basic Information

Insect: Catocala nupta
Gene Symbol: -
Assembly: GCA_963675205.1
Location: OY776106.1:13096682-13100023[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.00066 0.12 14.7 3.2 1 23 45 68 45 68 0.94

2 17 0.00035 0.062 15.5 3.2 1 23 110 132 110 132 0.96

3 17 0.012 2.1 10.7 0.1 2 23 160 182 159 182 0.90

4 17 0.0053 0.93 11.8 1.9 1 23 202 225 202 225 0.96

5 17 5.8e-05 0.01 18.0 0.4 1 23 230 253 230 253 0.96

6 17 0.0013 0.22 13.8 0.7 1 23 258 281 258 281 0.97

7 17 0.00064 0.11 14.7 0.5 2 23 284 306 284 306 0.95

8 17 0.0036 0.63 12.4 1.0 2 21 314 333 313 334 0.94

9 17 0.0015 0.27 13.5 2.1 1 23 386 409 386 409 0.95

10 17 8.8 1.5e+03 1.7 0.0 3 23 438 459 436 459 0.81

11 17 4.5 7.9e+02 2.6 0.0 2 23 482 505 481 505 0.86

12 17 1.1e-05 0.0019 20.3 0.2 3 23 512 533 511 533 0.94

13 17 0.0035 0.62 12.4 2.9 2 23 538 560 537 560 0.94

14 17 0.00032 0.056 15.7 5.1 1 23 565 588 565 588 0.96

15 17 2.3e-05 0.004 19.3 4.8 1 23 592 615 592 615 0.97

16 17 0.00015 0.027 16.7 0.3 2 23 622 643 621 643 0.96

17 17 1.4e-05 0.0024 20.0 1.4 1 23 649 671 649 671 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.00066	0.12	14.7	3.2	1	23	45	68	45	68	0.94
2	17	0.00035	0.062	15.5	3.2	1	23	110	132	110	132	0.96
3	17	0.012	2.1	10.7	0.1	2	23	160	182	159	182	0.90
4	17	0.0053	0.93	11.8	1.9	1	23	202	225	202	225	0.96
5	17	5.8e-05	0.01	18.0	0.4	1	23	230	253	230	253	0.96
6	17	0.0013	0.22	13.8	0.7	1	23	258	281	258	281	0.97
7	17	0.00064	0.11	14.7	0.5	2	23	284	306	284	306	0.95
8	17	0.0036	0.63	12.4	1.0	2	21	314	333	313	334	0.94
9	17	0.0015	0.27	13.5	2.1	1	23	386	409	386	409	0.95
10	17	8.8	1.5e+03	1.7	0.0	3	23	438	459	436	459	0.81
11	17	4.5	7.9e+02	2.6	0.0	2	23	482	505	481	505	0.86
12	17	1.1e-05	0.0019	20.3	0.2	3	23	512	533	511	533	0.94
13	17	0.0035	0.62	12.4	2.9	2	23	538	560	537	560	0.94
14	17	0.00032	0.056	15.7	5.1	1	23	565	588	565	588	0.96
15	17	2.3e-05	0.004	19.3	4.8	1	23	592	615	592	615	0.97
16	17	0.00015	0.027	16.7	0.3	2	23	622	643	621	643	0.96
17	17	1.4e-05	0.0024	20.0	1.4	1	23	649	671	649	671	0.97

Sequence Information

Coding Sequence: ATGGACCCTTCGCTGGAAACTGTCATAGTTGATGACGAGGAAAAGAAAGTTGCTACAAAAGATCTCAGAACTAGCATCGCTGCTATAATAAACATGTCTACCGCGTTACCATTTAAATTCTTCATGAGTAAATTCAGGTGCTTTTATTGCTCTAAAGACTTTTCAGACTGCGACAGTTTGAAAGAGCATACAGTTATGGAGCACCCACAATGCGATGTAGATGAATTGCCACGCCCCTACGGAGGATGTACCTCTGAAAGGAGACGGAAAAATCTGAAAATACTTTTCGACCACACCTCAGTAATGCCATTCAAATGGCGAGGCAAATATCTTTGCTTCTATTGCGGCAAGAACTACACCGAATACTCAGAGTTTAAAAAGCATACGAAATCTCACGGTATTTGCAACACAAAAGATTACTCGCTTAAATTAATCAAAGGAAATAACATAGAAATCAAAATCGATGTTTCAGAAATCTCTTGTGATATTTGTAACGAATCTTTCAATCGATTTGAGGAAATAATCGATCATTTGATTGGCAAGCATAAAttagaatacaataaaaatattgatattccaTTCCAAGAGTACCGACTAGCGGATTATAAGTGCCTACATTGCGAGGAGCAGTTTTCTTACTTCGGATATTTAGTAAATCACGTGAACAACATGCATCCACAGAATTGCTTTATTTGTAACGATTGTGGGGGACGTTTCAATAAGAAGAGAGATTTAGCGATTCACATAAGGAACTATCATCGCGTGGGAGGCTATCCGTGTAGCATGTGCTTGCAGAGTTTTGATACTCTGCAGGCCATGCGAAGACATCAAAACAGTACGCATTTTAGACAGTGCAAGAGTTGTGGTTCTAGATTCGCGTCTCTCTCGCTTTTGCAAAAACATTTGCAAGCAGAGCATCGCCACGATGAAGGTAACATGAAATGTAGCTACTGCTCTAAAGAGTTTCATTCCTCCATAGGTCTAAGGCAGCATATAAGCAaatgcaaagtaaaaataatatcgcaAGCCATACCCGAGTCTTTTCCTGAAGATAGCATTGAGCCTAGAAAGAAGCAAAACATTCTACAGATTCGTCAAAACATACAATGTGTTTTAAACATGTCTACGGCTATTCCCTTCAAATTCTTTTCCAAATATTCTTGCTTTTATTGCTCGAAGAAGTTCTTCGATTTCGATGACCTACGTGAACATACAACTATTGAACATCCCGTTTGTGATTTGAAACAGAAATGTATGAAAAAGTGTAAAGGCGAAAGAATTACCGTTAAAATTGATATTGCGGCTTTGGCTTGTAAAGTCTGTGGTCTGCCAATGCTCGATTTGGAATCTTTGATAAACCATTTAATAGTTGTGCATAAAGCGAATTATGATAAGTCTATCACTGGATGCCTCGAACCGTTTAGGATCATTAAAGATAACATGCCTTGTCCTATATGTCCGGATAAAATCTTTAGATACTTTGGAATCTTGTTACGTCATGTGAACGCAGAACACAGTAACAATAACAGGATTTGTGATTTCTGTGGCAGAAGCTTCCGTAACGCGGCCAATTTGAATGTTCATATAACGTACTCTCACACTGGTTCTTGTGAATGTGATGTCTGCGGCGTCAAATATAAAAACCAGTGGTGTCTAGCCAGGCATAGGGCTAAAACACATAACGCGAAAGACCACAAATGTCCCAAATGCCCTGAGACTTTCAATTCGCAATATCATAAGCAGAAGCATTTGATTAAAATGCACAATATTGGTCACAAGTGTGATTATTGCGATAAAATGTTCACAAGAAACTCGTTCATGAAAGACCATGTAAGACGGACGCATTTGAAGGAAAAAAATGTTCCTTGTTCTATTTGCAACGAGAAGTTCTTCGATAATTACCTTTTAAGGATGCATATGGTTAAGCATGAGGGAGATAGAAAATTCTGCTGTACTGTATGTGGCAAGGCCTTTTTGAGAAGGAGTAATTTGGCTTCCCACATGGAGATGCATAAAAAGTATGGACATGTGCAGTTACAAATTTGA
Protein Sequence: MDPSLETVIVDDEEKKVATKDLRTSIAAIINMSTALPFKFFMSKFRCFYCSKDFSDCDSLKEHTVMEHPQCDVDELPRPYGGCTSERRRKNLKILFDHTSVMPFKWRGKYLCFYCGKNYTEYSEFKKHTKSHGICNTKDYSLKLIKGNNIEIKIDVSEISCDICNESFNRFEEIIDHLIGKHKLEYNKNIDIPFQEYRLADYKCLHCEEQFSYFGYLVNHVNNMHPQNCFICNDCGGRFNKKRDLAIHIRNYHRVGGYPCSMCLQSFDTLQAMRRHQNSTHFRQCKSCGSRFASLSLLQKHLQAEHRHDEGNMKCSYCSKEFHSSIGLRQHISKCKVKIISQAIPESFPEDSIEPRKKQNILQIRQNIQCVLNMSTAIPFKFFSKYSCFYCSKKFFDFDDLREHTTIEHPVCDLKQKCMKKCKGERITVKIDIAALACKVCGLPMLDLESLINHLIVVHKANYDKSITGCLEPFRIIKDNMPCPICPDKIFRYFGILLRHVNAEHSNNNRICDFCGRSFRNAANLNVHITYSHTGSCECDVCGVKYKNQWCLARHRAKTHNAKDHKCPKCPETFNSQYHKQKHLIKMHNIGHKCDYCDKMFTRNSFMKDHVRRTHLKEKNVPCSICNEKFFDNYLLRMHMVKHEGDRKFCCTVCGKAFLRRSNLASHMEMHKKYGHVQLQI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00869876;
90% Identity: iTF_00636748;
80% Identity: -