Basic Information

Insect: Lasius platythorax
Gene Symbol: salm
Assembly: GCA_963971435.1
Location: OZ020539.1:18231450-18246071[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 2.7e-05 0.0055 18.6 1.0 1 23 374 396 374 396 0.98

2 9 1.1e-05 0.0023 19.8 2.1 1 23 402 424 402 424 0.98

3 9 5.1 1e+03 2.0 3.3 3 23 792 812 791 812 0.92

4 9 4.9e-08 9.8e-06 27.3 0.6 1 23 818 840 818 840 0.97

5 9 6.9e-05 0.014 17.4 2.6 1 23 850 872 850 872 0.98

6 9 0.014 2.8 10.1 3.2 2 23 1182 1203 1181 1203 0.97

7 9 0.035 7 8.8 1.0 1 14 1209 1222 1209 1223 0.92

8 9 6.6e-07 0.00013 23.7 2.1 3 23 1430 1450 1428 1450 0.96

9 9 2.3e-07 4.5e-05 25.2 0.9 1 23 1456 1478 1456 1478 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	2.7e-05	0.0055	18.6	1.0	1	23	374	396	374	396	0.98
2	9	1.1e-05	0.0023	19.8	2.1	1	23	402	424	402	424	0.98
3	9	5.1	1e+03	2.0	3.3	3	23	792	812	791	812	0.92
4	9	4.9e-08	9.8e-06	27.3	0.6	1	23	818	840	818	840	0.97
5	9	6.9e-05	0.014	17.4	2.6	1	23	850	872	850	872	0.98
6	9	0.014	2.8	10.1	3.2	2	23	1182	1203	1181	1203	0.97
7	9	0.035	7	8.8	1.0	1	14	1209	1222	1209	1223	0.92
8	9	6.6e-07	0.00013	23.7	2.1	3	23	1430	1450	1428	1450	0.96
9	9	2.3e-07	4.5e-05	25.2	0.9	1	23	1456	1478	1456	1478	0.98

Sequence Information

Coding Sequence: ATGTGCATCGTTCTTATTGTGGAATGTGTGAAAAGGACAAAAATATACGACATCCTGAAATACGGCGTGCAAAATGGAGCATATTGTGAAGAAAATGACTTCACATCAGACGGTGAGGAGAGCGGTGGTGGAGCAGGAGGCGAGGAAGCCGTGGATCTTACCGCGGCAAGATCTCATCAGGGCGACGAGGACGACAAGGATGCCGACGATCCTTTGGGCGAGGACGAGGAAGACGGCGGTGACGAGCAAGACGAGCAATACGAGGACGAGGAGGGCTCGCGAAAACAGATTCGCCATCGACAGGACGCGGAAAACAACAACAGTTTTGTCGGGAGTGGCTCAACTTCCGCTGGAATATTTCCACCTGCTGGAACTAGTCATGTCACTCTCGAGGCCCTTCAAAATACGAAAGTTGCGGTCGCGCAGTTCGCTGCCACCGCCCTCGCTGGTGGAGTCGATAGCGACGCGGCATTACAGGATCTGGCCTTTCTACAAAGTACGCTGTATAATCTTCAGCATCAACAGGTACTCCAGTTACAGTTTATCAGCCAGCTTCAGCAACAATTATCGATCACTCAAAAGCAATCGGTAGCGCAACCGTCATCGATAGAGCCAGCTGATAGCAAGGAGGCCTCGTCGTCTCCCATCATCCATCCAAAACCATTGTCGAGTCTTACATCACCACCTTCTTCCCGGCCACCGAGTCACCATCACTCATCACCAGCGCCACTGACGCCGAATCTGCTTCAAGAACGACCCACCTCGACGAGCAGTGCCTCACCATTGAATCTACCCCTGTCTTCGTCCGGCACTACGTCGACAACTACCGCTACAACTACCAGCAGTCAAATCTCACTGTCGCATCAAATGCCGCCTCTTTGCTCGATCAGCTCTTCCCTCGCTTCGTCTATCATAACGAACAACGATCCACCGCCGCTTCACGAGCCGAACACGTTGGAGATGCTTCAGAAACGCGCCCAGGAAGTGTTGGACAATGCCAGTCAAGGTCTATTGGCTAACAATCTGGCTGATGAGCTCGCGTTCAGAGGCAGTAAAGGCTCACGGCTTTCGCCTTACGATTCGAAAACGAGCGGCGGTCGCGGCGAGCCCTTCTTCAAGCATCGATGTCGTTTCTGTGGCAAGGTCTTCGGCAGCGATTCAGCGCTACAGATCCACATACGATCCCATACAGGTGAGCGACCCTTTAAGTGCAACGTCTGCGGCAGCCGATTCACCACCAAGGGCAACCTGAAGGTCCACTTTCAGAGGCATACGGCCAAGTTTCCACACGTAAAGATGAATCCGAATCCCGTTCCAGAACATCTAGACAAATACCATCCGCCCCTCTTGCAGCAAATTGCTTCCGGGCAACGGCCAATATCCCCGCCGCCGCCACCCCTCGCCATTCATCATCCCTCGTGTCATCCGGCACGTAGGGAGCACAGTTTCCTACCACCACAGCCGCCTTTACCTCTCAGTCTCACCTCGCCCGGCATGATCCTTTGCCGATTACCGGTTATTAATCACCGGGACGATCAGGATGTGCCGGAAAACCTTAGTAAACCCGTAACCGCTGCCCCGCCGACGTCCCCTACTTCCCCCGCCGCTATATCGAACTCTCATCATTCCTTTCACGACAATCATCATCAACAACAACAAAAGCAGCAGCTCGAACAGAGGGAGGAGATAAAACTCGAGCAGAGATCGCCCGGACAGGAGCAATACCAGCAACGACCAATGAGCCAGGAAGACGCCGGGCGTATAACCCCGAAGAGAGAACCCGAGGAGACGGACGAACCCGTGGAAACGGAAGACGGCGAGGATTTTGAGGAGGCAACGAGGCGATCTCTCAACTCACCTTCGTCCTTGGTGAATCCGTCGTTTCAGCCACAAACGTACGAGGATTGTAGTATGGACAGCAAGATCAGTGGACGATTAGAGGGCGACGGGGAGATGGAGATAGATGAAGAAACGGAGGAGCAACCGGAGAACCTTTCTGGCAAAGGTACGATCAATCGCTTGCCCCAACAGATGATGGCATACCCCGGAGCATCTCCAGCTAGTAGTAGCGCGAGTAGCGGTAGTCTTCAGACGTCCTTTGCCGGGATTCTATTCCCGAGCGCCCCCCCGACTCATCATCAAATACCTCCTCATCTTCCGGTGGTTTCCACTGCTGGACAGACGCCGACCGTCTCCGCGAACGAGATGCTCGATCCAGCTAAGGATCCAGCGATTTATTCGAGCTTGTTACCGCGACCGGGCAGCAATGACAATTCTTGGGAAAGCTTGATCGAGATAACGAAAACGTCGGAGACGTCGAAATTGCAGCAGTTAGTCGATAATATCGAGCACAAGCTGAGCGACCCTAATCAGTGCATCGTTTGTCATAGAGTGCTCTCGTGCAAGAGCGCGTTACTGATGCATTATCGCACTCACACGGGCGAGCGTCCTTTCAAATGCAAGATATGCGGTCGCGCGTTTACCACAAAGGGCAATCTAAAGACTCACATGGGAGTGCATAGAGCTAAACCACCGCTGAGAGTGTTGCATCAGTGTCCGGTGTGTCACAAGAAATTCACAAACGCCCTCGTGCTTCAGCAGCACATACGCCTTCACACCGGCGAACCTACCGATCTCAGTCCGGAGCAGATTCAAGCCGCAGAAGTAAATGAATTTCCGGGTTGTTATCCTCAACCACAACTTTCCTTCTTCCCGCAAGGATTCGCGCCAATGCATCCGACAGGTGCTGGTTTTACCTTAGGATTTCCTGGATCTAGGCAACCGACTATTGAGCAACAATCGAATGAAAATGACGTCGACTTGAAGGAGGAATCTCAGCATCAACGGCAAAGATTTATGGAAGAGCATAGCGAGGAGATGGAAGATCAGGATGACGAGGAGCAGGATCGCAGAGAGGACGACGATAGGTGCGAGGTGAATCGCGACAGACGTAGCGCCGAGATGATCGAGAAGGAGCAGGAACACGAGAGCGAGGAGACCGAGCACAGAGACATGATACTTCCCATGTTTTCAACCTCGCTGGCGGCCCTCGAGAACCAAGTGAAGACCATCACGACGACGATCGCCACGACGACGATCGCGAACGCGGCCAGATCGCCGCCGTCCTTTCACCGATACAATGGTAGCGAAAAGAGCGATAGCTCGCCGATGTCCGGCGCCCCGCTCGATCTGACACCTCGCGCTTCGTCCACTCCGGCATCGGTGGCTTCCGCGTCGCCGacaccgccaccgccaccaccgctgccgccgccgccgccgtcccAGACCGCGCCGTCGCACCATCCGTCGCATCCCTTCAGCATGTTTGCCGGATTGCTGCAAGCGGTCTCGTCCGCGCCCGTCACCAGCACGCCAGGCACGTCCAACATAAATAGCGTGACGTCGATGAGCGCGATCAACCCGGGAAGCGCTCCCGGCAGCGGACCTCTAGCCTCGCTAACCACCTCAGCTGTACTAGCCGCGTCATCGACTTACAATCCGCTCGGTCTAGCTGTCGGAGGGCCAGCAGTACGTGGCAACACCACTTGTAAATTCTGCTACAAGACGTTCGCATGCCAATCCGCGTTGGAGATACATTACCGGAGTCATACGAAGGAACGACCTTTCAAATGCACTATATGCGACCGAGGTTTTTCCACGAAGAACGACGATTCCGGTCAGCAAGTATGTTCCTGCGCGGACCAACCCTTCGCCGCGAAGGGTCCGATCCCCCCACAACCCAATCCCCAATACCGCTCGTTCCCGGCGAGATCGGCCGCCGGAAATCGTGAGAAACCGAAACGCAGGCGGCGGCGGCCTGAGGAGCGGAAGAACCGGGGGCGGACAGGAGCAGGAGGGGGGCGAAGGCTGACGTCTGTTTATCCTGCCGTCCGCCTGCCCCCGCTGATGCCACCCGCCCTCGGACTTCTACCCTCGGACCACGTCTTCCTGGGTAATATGAAGCAGCACATGTTGACTCATAAGATTCGCGATATGCCGCCGCATCTATTCAGCGATGCAAAGCCACAGCAGCCGCAGCCGCAGCAGCtacaacaacagcagcagcagcagcagccgcaacagcagcagcaatgTCAGGATCACGAAACTTCCAGGAGCCCGATGTGCACCGATGATTCTAGTTTACCGCCCCCACCTCCACCCCCACCACCGCCCCCACCGATGCCACCTACGTCAATCGAGTCCGCGATACCAATAAAGAGATCCCCGCCGGAAGGAGATTTGCCGGCGCCAAAGAGACCAACCAGCGTGCAGAGCAAGCACTTGTGCCAGATTTGCAATAAGAATTTCTCCTCGTCTTCGGCGCTCCAGATCCATATGAGAACTCACACTGGCGACAAACCGTTCCGATGCACCGTCTGCCAGAAAGCGTTCACCACCAAAGGCAATCTCAAgGTACACATGGGTACGCATATGTTCACCAACGGAACGTCGCGTCGAGGTCGACGAATGTCATTGGATCTACCGCCCCTGCCAATCACACCCAAGGACTCGGAGTTTCTGCAACGACGACCGGACCTTTTTTACCCCTATCTTCCCGCACCATTCCTTAACGGCGTCCAGCAGAAGCTGAACGAGATCTCGGTGATTCAAAGTAACAACGGGTTGCCGCCTCATTCCTTGGGCGCGGGCAAGTACGCGGCGAGTCTGTTCGGCTCCGTGTACGGGGCCGCCGGGGGCGGTTTCCCCTTGGACAAGCAGCCGATGGCGCCAACCAGTAACGGACCCCTGGTGGACGGCAAGTCCGCCATCCCGTCGGGCTCCATGCTCTTTCAAACGCCGTCGCCCACGCACTCGCCCGGCGCGCCGTCGTCCAACGGCGGTAATCAAAACTCAGTTAACGTACCGTCCTGGACCGGCGACGCTCTTCAGCATCATTTCGACCGAGAAACACCGAGCAGAACCGAGAATGACGCCACGCCGCCCACCGCCGCACGTCTACCACCACCGCCGACGGCGAGGGGAGAGGGATTAGCCGCGTGA
Protein Sequence: MCIVLIVECVKRTKIYDILKYGVQNGAYCEENDFTSDGEESGGGAGGEEAVDLTAARSHQGDEDDKDADDPLGEDEEDGGDEQDEQYEDEEGSRKQIRHRQDAENNNSFVGSGSTSAGIFPPAGTSHVTLEALQNTKVAVAQFAATALAGGVDSDAALQDLAFLQSTLYNLQHQQVLQLQFISQLQQQLSITQKQSVAQPSSIEPADSKEASSSPIIHPKPLSSLTSPPSSRPPSHHHSSPAPLTPNLLQERPTSTSSASPLNLPLSSSGTTSTTTATTTSSQISLSHQMPPLCSISSSLASSIITNNDPPPLHEPNTLEMLQKRAQEVLDNASQGLLANNLADELAFRGSKGSRLSPYDSKTSGGRGEPFFKHRCRFCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTAKFPHVKMNPNPVPEHLDKYHPPLLQQIASGQRPISPPPPPLAIHHPSCHPARREHSFLPPQPPLPLSLTSPGMILCRLPVINHRDDQDVPENLSKPVTAAPPTSPTSPAAISNSHHSFHDNHHQQQQKQQLEQREEIKLEQRSPGQEQYQQRPMSQEDAGRITPKREPEETDEPVETEDGEDFEEATRRSLNSPSSLVNPSFQPQTYEDCSMDSKISGRLEGDGEMEIDEETEEQPENLSGKGTINRLPQQMMAYPGASPASSSASSGSLQTSFAGILFPSAPPTHHQIPPHLPVVSTAGQTPTVSANEMLDPAKDPAIYSSLLPRPGSNDNSWESLIEITKTSETSKLQQLVDNIEHKLSDPNQCIVCHRVLSCKSALLMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPLRVLHQCPVCHKKFTNALVLQQHIRLHTGEPTDLSPEQIQAAEVNEFPGCYPQPQLSFFPQGFAPMHPTGAGFTLGFPGSRQPTIEQQSNENDVDLKEESQHQRQRFMEEHSEEMEDQDDEEQDRREDDDRCEVNRDRRSAEMIEKEQEHESEETEHRDMILPMFSTSLAALENQVKTITTTIATTTIANAARSPPSFHRYNGSEKSDSSPMSGAPLDLTPRASSTPASVASASPTPPPPPPLPPPPPSQTAPSHHPSHPFSMFAGLLQAVSSAPVTSTPGTSNINSVTSMSAINPGSAPGSGPLASLTTSAVLAASSTYNPLGLAVGGPAVRGNTTCKFCYKTFACQSALEIHYRSHTKERPFKCTICDRGFSTKNDDSGQQVCSCADQPFAAKGPIPPQPNPQYRSFPARSAAGNREKPKRRRRRPEERKNRGRTGAGGGRRLTSVYPAVRLPPLMPPALGLLPSDHVFLGNMKQHMLTHKIRDMPPHLFSDAKPQQPQPQQLQQQQQQQQPQQQQQCQDHETSRSPMCTDDSSLPPPPPPPPPPPPMPPTSIESAIPIKRSPPEGDLPAPKRPTSVQSKHLCQICNKNFSSSSALQIHMRTHTGDKPFRCTVCQKAFTTKGNLKVHMGTHMFTNGTSRRGRRMSLDLPPLPITPKDSEFLQRRPDLFYPYLPAPFLNGVQQKLNEISVIQSNNGLPPHSLGAGKYAASLFGSVYGAAGGGFPLDKQPMAPTSNGPLVDGKSAIPSGSMLFQTPSPTHSPGAPSSNGGNQNSVNVPSWTGDALQHHFDRETPSRTENDATPPTAARLPPPPTARGEGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00417805;
90% Identity: iTF_00867667; iTF_00110027; iTF_01245420; iTF_00729554; iTF_00730971; iTF_00730263; iTF_01077695; iTF_01255025; iTF_00265215;
80% Identity: -