Basic Information

Insect: Anoplolepis gracilipes
Gene Symbol: salm
Assembly: GCA_031304115.1
Location: JAPWJP010000294.1:310884-324916[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 2.6e-05 0.0047 18.6 1.0 1 23 403 425 403 425 0.98

2 9 1.1e-05 0.0019 19.8 2.1 1 23 431 453 431 453 0.98

3 9 4.8 8.6e+02 2.0 3.3 3 23 826 846 825 846 0.92

4 9 4.6e-08 8.3e-06 27.2 0.6 1 23 852 874 852 874 0.97

5 9 6.4e-05 0.012 17.3 2.6 1 23 884 906 884 906 0.98

6 9 0.013 2.4 10.1 3.2 2 23 1211 1232 1210 1232 0.97

7 9 0.033 6 8.8 1.0 1 14 1238 1251 1238 1252 0.92

8 9 6.2e-07 0.00011 23.7 2.1 3 23 1472 1492 1470 1492 0.96

9 9 2.1e-07 3.8e-05 25.1 0.9 1 23 1498 1520 1498 1520 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	2.6e-05	0.0047	18.6	1.0	1	23	403	425	403	425	0.98
2	9	1.1e-05	0.0019	19.8	2.1	1	23	431	453	431	453	0.98
3	9	4.8	8.6e+02	2.0	3.3	3	23	826	846	825	846	0.92
4	9	4.6e-08	8.3e-06	27.2	0.6	1	23	852	874	852	874	0.97
5	9	6.4e-05	0.012	17.3	2.6	1	23	884	906	884	906	0.98
6	9	0.013	2.4	10.1	3.2	2	23	1211	1232	1210	1232	0.97
7	9	0.033	6	8.8	1.0	1	14	1238	1251	1238	1252	0.92
8	9	6.2e-07	0.00011	23.7	2.1	3	23	1472	1492	1470	1492	0.96
9	9	2.1e-07	3.8e-05	25.1	0.9	1	23	1498	1520	1498	1520	0.98

Sequence Information

Coding Sequence: atgtgTGAAAAGGACAAAAGTTGCATAGGACATCCTAAAATATCGTGTGCGAAATGGAGTATTATACATCCAAAGCGCTTACACAAAATCAAATCAAGATTATGTAATAGACCAAAAAATTTAGCGGTGTCTCGCACTATGTCAAGAATACCGAGAATGTTGATGTTAAGTGAAGAAAATGACTTCATATCAGACGGTGAGGAGAGCGGCGGTGGGGCAGGAGGCGAGGAAGCTGTGGATCTCACCGCGGCGAGATCGCATCAGGGCGACGAGGACGACAAGGATGCCGATGATCCTCTCGGCGAGGATGAAGAAGACGGTGGTGACGAACAAGACGAGCAATACGAGGACGAGGAGGGTTCGCGAAAACAGATTCGCCATCGGCAGGACGCAGAAAACAACAACAGTTTTGTCGGGAGTGGCTCAACCTCCGCAAGTGGAATATTTCCACCCGCTGGAACTAGTCATGTCACTCTCGAGGCCCTTCAAAATACGAAAGTTGCGGTCGCGCAGTTCGCTGCCACCGCCCTCGCTGGTGGAGTCGATAGCGACGCGGCATTACAGGATCTGGCCTTTCTACAAAGTACGCTGTATAATCTTCAGCATCAACAGGTACTCCAGTTACAATTTATCAGCCAGCTTCAGCAACAATTATCGATCACTCAAAAGCAACCGGTAGCGCAACCGTCGTCAATAGAGCCAGCTGATAGCAAGGAGGCCTCGTCGTCTCCCATCATTCATCCGAAACCATTGTCGAGTCTCACATCACCACCTTCTTCCCGGCCACCGAGTCATCATCACTCATCACCAGCGCCACTGACGCCGAATCTGCTTCAAGAACGACCGACCTCGACGAGTAGTGCCTCTCCATTAAATCTACCCCTGTCTTCGTCTGGCACTACATGTACGACTACCGCTACGACTACCAGCAGTCAAATCTCATTGTCGCATCAAATGCCGCCTCTTTGCTCGATCAGTTCTTCCCTCGCTTCGTCTATCATAACGAACAACGATCCACCGCCGCTTCACGAACCGAACACGCTGGAGATGCTGCAGAAACGCGCCCAGGAGGTGTTGGACAACGCGAGTCAAGGTCTATTGGCCAACAATCTGGCCGATGAGCTCGCGTTTAGAGGCAGTAAAGGCTCACGGCTCTCGCCTTACGACTCGAAAACGAGCGGCGGTCGCGGCGAGCCTTTCTTCAAGCATCGATGTCGCTTCTGTGGCAAGGTCTTCGGCAGCGATTCAGCACTACAGATCCACATACGATCCCATACAGGTGAGCGACCCTTTAAGTGCAACGTCTGCGGAAGCCGATTCACCACCAAGGGCAACTTGAAGGTCCACTTTCAGAGGCATACGGCCAAGTTTCCACACGTAAAGATGAATCCGAATCCCGTTCCAGAACATCTAGACAAATACCATCCGCCCCTCTTGCAACAAATTGCTTCCGGGCAACGGCCAATATCCCCGCCGCCGCCACCTCTCGCCATTCATCATCCCTCGTGTCATCCGGCACGTAGGGAGCACAGTTTTCTACCACCACAGCCGCCTTTACCTCTCAGTCTCAGTTCGCCCGGCATGATCCTTTGCCGATTACCGGTTATTAATCACCGGGACGATCAGGATGTGCCGGAAAACCTTAGTAAACCCGTAACGACTGCCCCGCCGATGTCTCCTCCTTCCCCTGCCGCTATGTCGAATTCTCATCATTCCTTTCACGACAATCATcatcaacaacaacaacaaccaCAACCACAACAAAAGCAGCAACTCGAGCAGAGAGAGGAGATAAAGCTCGAGCAGAGATCGCCTGGACAGGATCAGTACCAGCAACGACCAATGAGCCAGGAAGACGCCGGGCGCATAACCCCGAAAAGAGAGCCTGAGGAGACGGACGAACCTGTGGAAACGGAAGACGGCGAGGACTTTGAGGAAACAACGAGACGATCTCTCAACTCACCTTCATCCTTGGTGAATCCATCGTTTCAGCCACAAACGTACGAAGACTGTAGTATGGACAGCAAGATCAGCGGACGTTTAGAAGGCGACGGGGAAATGGAAATGGACGAGGAAACGGAAGAGCAACCGGAGAACCTCTCTGGCAAGGGTACGATCAATCGCTTGCCCCAACAGATGATAGGATATCCCGGAGCTTCTCCAGCTAGTAGTAGCGCGAGTAGTGGTAGTCTTCAGACATCCTTTGCGGGGATTTTGTTTCCGAGTGCACCGACTCATCATCAAATACCTCCTCATTTTCCAGCCGTTTCGACCGCTGGACAGACGCCGACCGTTTCCGCGAATGACATGATCGATCCGGCTAAGGATCCAGCGATTTATTCGAGCTTGTTACCGCGACCAGGTAGCAACGACAATTCCTGGGAAAGTTTGATTGAGATAACGAAAACTTCGGAGACGTCAAAATTACAGCAGCTAGTCGATAATATTGAACATAAACTGAGTGATCCTAATCAGTGCATCGTTTGTCATAGAGTGCTCTCGTGCAAGAGCGCGTTACTAATGCATTATCGCACTCACACGGGCGAACGTCCATTCAAGTGTAAAATCTGCGGTCGCGCGTTTACCACTAAGGGCAATTTAAAGACTCATATGGGAGTGCATAGGGCTAAACCACCACTAAGAGTGCTGCACCAGTGTCCGGTGTGTCACAAGAAGTTCACGAACGCTCTTGTGCTTCAGCAGCACATACGTCTTCACACTGGAGAACCTACCGATCTCAGTCCAGAGCAGATTCAAGCAGCTGAAGTTAATGAGTTTCCGGGTTGTTATCCTCAACCTCAGATTTCCTTCTTCCCGCAAGGATTTCCGCCGATACACCCTCCCGGTGGCTTTACCTTAGGATTCCCTGGATCTAGGCAACCAACCATCGAGCAACAATCGCATGAAAATGACGTGGATTTGAAGGAAGAGTCTCAGCAACAACGGCAAAGATTTATGGAAGAACATATCGAGGAGATGGAAGATCAGGATGACGAGGAGCAAGATCGCAGAGAAGACGACGATAGGTGCGAGATGAATCGCGATAGACCTACGTCTAGTGCCGAGATGATCGAGAAAGAGCAGGAGCACGACAACGAGGAGATCGAGCACAGAGACATGATACTTCCCATGTTTTCAACTTCGCTAGCGGCTCTCGAGAACCAAGTAAAGACCATCACCACCACGATTGCCACGACGACGATCGCCAACGCAGCCAGATCGCCGCCGTCCTTTCACCGATACAATGGTAGCGAGAAGAGTGACAGCTCGCCAACGTCCGGTGCCCCGCTCGATTTGACACCTCGCGCTTCCTCCACTCCGGCATCGGTAGCTTCCGCATCGCCaacaccaccaccaccgccgccACCCCAGACTGCACCGTCGCATCATCCATCGCATCCCTTCAGCATGTTTGCCGGACTGCTGCAAGCGGTTTCGTCCGCCCCAGCCACCAGTACGCCAGGCACGTCCAACATAAATAGCGTCACGTCGATGAGCGCGGTCAATCCGGGAAACGCTCCCGGCGGTGGACCTCTAGCCTCGCTAACCACCTCAGCTGTCCTAGCCGCGTCGTCGACTTACAATCCGCTCGGTCTAGCTGTCGGAGGGCCAGCAGTACGTGGCAACACCACTTGTAAATTCTGCTACAAGACGTTCGCGTGTCAATCCGCGTTGGAGATACATTACCGGAGTCATACAAAGGAACGACCTTTCAAATGCACTATATGCGACCGAGGTTTTTCCACAAAGAACGACGATTCCGGTCAGCAAGTATGTTCCTGCGCGGAGCAACCCTTCGCCGCGAAGGGTCCGATCCCCCCACAACCCAATCCCCAATACCGCTCGTACCCGGCGAGATCGGCCGCCGGAAATCATGAGAAACCGAAACGCAGGCGGCGGCGGCCTGAGGAGCGGAAGAACCGGGGGCGGACAGGAGCAGGAGGGGGGCGAAGGCTGACGTCTGTTTATCCTGCCGTCCGCCTGCCCCCGCTGATGCCACCCGCCCTCGGACTTCTACCCTCGGACCACGTCTTCCTGGGTAATATGAAGCAGCACATGTTGACTCATAAGATTCGCGATATGCCGCCGCATCTATTCAGCGATGCAAAGCAACCGCAACCGCAGCAACAGCatcagcaacaacaacaacaacaacaacagcagcagcagcagcagcagcagcagcagcagcagcaacatcAGCAGCAGCAGACGCAATGTCAGGATCACGAAACTTCCAGGAGCCCAATGTGCACCGATGACTCGAGCCTACCACCCCCGcctccaccaccaccaccgcctCCACCGATGCCACCTACGTCAATCGAGTCGGCGATACCAGTAAAGAGATCCCCGCCAGAAGGAGATTTGCCAGCGCCAAAGAGACCAGCCAACATGCCGAGCAAGCACTTGTGCCAGATTTGCAATAAGAATTTCTCCTCGTCTTCGGCGCTCCAGATCCATATGAGAACCCACACTGGCGACAAACCATTCCGATGCACCGTCTGTCAGAAGGCGTTCACCACCAAAGGCAACCTTAAgGTACACATGGGCACTCATATGTTCACCAACGGAACGTCACGTCGAGGTCGAAGAATGTCATTGGATCTACCTCCCCTGCCAATCACGCCCAAGGACTCGGAGTTTCTGCAACGACGACCGGACCTTTTTTACCCATATCTTCCCGCACCATTCCTTAACGGCGTCCAGCAGAAGCTGAACGAGATCTCGGTGATTCAAAGTAACAACGGATTGCCACCTCATTCCTTGGGCGCGGGCAAATACGCGGCGAGTCTGTTCGGCTCGGTGTACGGAGCTGGTGGAGGCGGTTTCCCCTTGGATAAGCAGCCGATGGCGCCAACCAGCAACGGACCCCTTGTGGACGGCAAATCCGCTATTCCGTCGGGCTCCATGCTTTTCCAAACACCATCGCCCACGCACTCACCCGGTGCGCCATCGTCCAACGGTAGTAATCAAAACTCAGTTAACGTGCCGTCCTGGACCGGTGACGCTCTTCAGCATCATTTCGATCGGGAGACACCGAGCAGAACCGAGAACGACGCCACGCCGCCCACCGCCGCACGTCTACCACCGCCACCGGCGAGGGGAGAGGGATTAGCCGCGTGA
Protein Sequence: MCEKDKSCIGHPKISCAKWSIIHPKRLHKIKSRLCNRPKNLAVSRTMSRIPRMLMLSEENDFISDGEESGGGAGGEEAVDLTAARSHQGDEDDKDADDPLGEDEEDGGDEQDEQYEDEEGSRKQIRHRQDAENNNSFVGSGSTSASGIFPPAGTSHVTLEALQNTKVAVAQFAATALAGGVDSDAALQDLAFLQSTLYNLQHQQVLQLQFISQLQQQLSITQKQPVAQPSSIEPADSKEASSSPIIHPKPLSSLTSPPSSRPPSHHHSSPAPLTPNLLQERPTSTSSASPLNLPLSSSGTTCTTTATTTSSQISLSHQMPPLCSISSSLASSIITNNDPPPLHEPNTLEMLQKRAQEVLDNASQGLLANNLADELAFRGSKGSRLSPYDSKTSGGRGEPFFKHRCRFCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTAKFPHVKMNPNPVPEHLDKYHPPLLQQIASGQRPISPPPPPLAIHHPSCHPARREHSFLPPQPPLPLSLSSPGMILCRLPVINHRDDQDVPENLSKPVTTAPPMSPPSPAAMSNSHHSFHDNHHQQQQQPQPQQKQQLEQREEIKLEQRSPGQDQYQQRPMSQEDAGRITPKREPEETDEPVETEDGEDFEETTRRSLNSPSSLVNPSFQPQTYEDCSMDSKISGRLEGDGEMEMDEETEEQPENLSGKGTINRLPQQMIGYPGASPASSSASSGSLQTSFAGILFPSAPTHHQIPPHFPAVSTAGQTPTVSANDMIDPAKDPAIYSSLLPRPGSNDNSWESLIEITKTSETSKLQQLVDNIEHKLSDPNQCIVCHRVLSCKSALLMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPLRVLHQCPVCHKKFTNALVLQQHIRLHTGEPTDLSPEQIQAAEVNEFPGCYPQPQISFFPQGFPPIHPPGGFTLGFPGSRQPTIEQQSHENDVDLKEESQQQRQRFMEEHIEEMEDQDDEEQDRREDDDRCEMNRDRPTSSAEMIEKEQEHDNEEIEHRDMILPMFSTSLAALENQVKTITTTIATTTIANAARSPPSFHRYNGSEKSDSSPTSGAPLDLTPRASSTPASVASASPTPPPPPPPQTAPSHHPSHPFSMFAGLLQAVSSAPATSTPGTSNINSVTSMSAVNPGNAPGGGPLASLTTSAVLAASSTYNPLGLAVGGPAVRGNTTCKFCYKTFACQSALEIHYRSHTKERPFKCTICDRGFSTKNDDSGQQVCSCAEQPFAAKGPIPPQPNPQYRSYPARSAAGNHEKPKRRRRRPEERKNRGRTGAGGGRRLTSVYPAVRLPPLMPPALGLLPSDHVFLGNMKQHMLTHKIRDMPPHLFSDAKQPQPQQQHQQQQQQQQQQQQQQQQQQQQQHQQQQTQCQDHETSRSPMCTDDSSLPPPPPPPPPPPPMPPTSIESAIPVKRSPPEGDLPAPKRPANMPSKHLCQICNKNFSSSSALQIHMRTHTGDKPFRCTVCQKAFTTKGNLKVHMGTHMFTNGTSRRGRRMSLDLPPLPITPKDSEFLQRRPDLFYPYLPAPFLNGVQQKLNEISVIQSNNGLPPHSLGAGKYAASLFGSVYGAGGGGFPLDKQPMAPTSNGPLVDGKSAIPSGSMLFQTPSPTHSPGAPSSNGSNQNSVNVPSWTGDALQHHFDRETPSRTENDATPPTAARLPPPPARGEGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00417805;
90% Identity: iTF_00869103;
80% Identity: -