Basic Information

Insect: Lasioglossum pauxillum
Gene Symbol: -
Assembly: GCA_028455745.1
Location: CM052302.1:32920571-32925820[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 1.4e-05 0.0016 19.3 1.6 1 23 500 523 500 523 0.97

2 17 0.0029 0.33 12.0 0.7 2 23 556 577 555 577 0.94

3 17 7.7 8.7e+02 1.2 2.3 1 22 714 735 714 735 0.94

4 17 1.6e-05 0.0018 19.1 1.0 1 23 742 765 742 765 0.94

5 17 0.46 52 5.1 4.3 1 22 775 796 775 798 0.89

6 17 3 3.3e+02 2.5 0.1 2 19 821 838 820 841 0.90

7 17 0.16 17 6.6 3.3 1 23 848 871 848 871 0.93

8 17 0.099 11 7.2 2.1 1 23 882 905 882 905 0.85

9 17 0.02 2.3 9.4 0.1 1 21 938 958 938 959 0.95

10 17 0.0038 0.43 11.6 0.1 1 21 1051 1071 1051 1072 0.95

11 17 0.0033 0.37 11.8 3.1 1 23 1079 1101 1079 1101 0.98

12 17 0.026 2.9 9.0 1.7 1 23 1111 1134 1111 1134 0.94

13 17 0.029 3.2 8.9 0.1 2 20 1171 1189 1170 1191 0.92

14 17 0.0064 0.72 10.9 4.1 1 23 1198 1220 1198 1220 0.96

15 17 3.2 3.6e+02 2.4 0.2 1 23 1229 1252 1229 1252 0.86

16 17 0.26 29 5.9 0.3 1 23 1415 1438 1415 1438 0.95

17 17 7.4e-05 0.0083 17.0 0.0 2 23 1460 1482 1459 1482 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	1.4e-05	0.0016	19.3	1.6	1	23	500	523	500	523	0.97
2	17	0.0029	0.33	12.0	0.7	2	23	556	577	555	577	0.94
3	17	7.7	8.7e+02	1.2	2.3	1	22	714	735	714	735	0.94
4	17	1.6e-05	0.0018	19.1	1.0	1	23	742	765	742	765	0.94
5	17	0.46	52	5.1	4.3	1	22	775	796	775	798	0.89
6	17	3	3.3e+02	2.5	0.1	2	19	821	838	820	841	0.90
7	17	0.16	17	6.6	3.3	1	23	848	871	848	871	0.93
8	17	0.099	11	7.2	2.1	1	23	882	905	882	905	0.85
9	17	0.02	2.3	9.4	0.1	1	21	938	958	938	959	0.95
10	17	0.0038	0.43	11.6	0.1	1	21	1051	1071	1051	1072	0.95
11	17	0.0033	0.37	11.8	3.1	1	23	1079	1101	1079	1101	0.98
12	17	0.026	2.9	9.0	1.7	1	23	1111	1134	1111	1134	0.94
13	17	0.029	3.2	8.9	0.1	2	20	1171	1189	1170	1191	0.92
14	17	0.0064	0.72	10.9	4.1	1	23	1198	1220	1198	1220	0.96
15	17	3.2	3.6e+02	2.4	0.2	1	23	1229	1252	1229	1252	0.86
16	17	0.26	29	5.9	0.3	1	23	1415	1438	1415	1438	0.95
17	17	7.4e-05	0.0083	17.0	0.0	2	23	1460	1482	1459	1482	0.94

Sequence Information

Coding Sequence: ATGTACCGGGGTTATTGGCGGGACGACTGGTGGACGAGAGACATGACGCGGAACGAGCTTCATACTGGGGTACGGGTGAAACAAGAGCCACGTGACACGGATGACAAAAGTCAGGACAGTATTTTGCCATTTGCAAATATTAGTGTAAAGAGTACCACATCGGCTGAAACGACTGTTCAAGGGACACAACTGGTGGACGTTGTAAATAACAAAGAGAATGAGCTTGTATCCTCTACGAACCGTGCCGATATGGGCAAATCGGGTACGGATGAGGTTAATACGAAGAAGCGTAAACGATTAACATTTAAGAATTTGAAAAAGCCGGAAACGGTGTCTGAGCAAGTGTGGAAACAACATAAAAGGGCCTGTCGTAGTAGCATTGAACGTAAACCTCCGGAATCAGTAAGCAAAGAATCTAAAATTAAGGAAGTAGAATGCGACAGTATTGCAAGTGATGCCAGTGAAACTGATGAAAATAATGAAACGGATAGGACCAAAGAGACCGATAAAATCAGTGAACCACCATTGACAGAGCGCACTAACGATCACGTAGAACATCCTTTTTTACAGAAGAAAGAAAAGAGTCTAGCCGATAGTCCTACCAAAAGAATGAGACAAACAACTATAACGGAGTTCCTTTCAGGATTCACGAGAAAAGATCACGTTTCTCCGAAAGAGGTTGATCCTATAAGAGAAACCCCGAAAAATGTAAGTGCTAACCAATCAGGAAGAATAACGGAGAAAGTAAAGGAGACACCGAAAAAAGCCACCCCTAAGCAAAATGGAAGAATAATAGAGAAACTCAATTTCTCGCCAGAAATTCTGAAAAAGGTTAGACAAAACAGAACAGTAGCAGAATGCGTTTCCACTCCCCGTAATGAGAAAGCGCCGACTATTGGTGAAAGTCCTGGGTTACGTAGCAAAACTGGCAAGGAGAAAACACCATTTGTCGAGATACACATGGGTTCTGATGAGATGGTGGCCTTATTGCATACGAAAATTAAAATCGAACCAGAACATAAATATAACAATCCTACGCCACAGAATGGATCCTACAACCTTAGACGCGTGACAAGAAATAGTCTTGATCGACCGCCGAGTGATGTGAATACACGGCCTCATATTCATAGAAACCGTAATTCTAAAGGGCAGTTCCTTACCATCTCTAATGGGACATCGAAGGCTCGGTCGAAGGAGGAGTTACTGAGGGCCAAGTTCAAATGTAGAGACTGCAAAGTTAATCTAGTTAGATGCGACACGGTTGTCAAAACAGAAATTGTCGATTATGTCCCGTCGTCTTCGGTAAACGTACATGATGACATCGAGGAGGTTTGGAGAAAGAAGGTTAAGTTAAAGAGAATCCACGTTCCATTGGTCAGACTGAACAAGCTGATAAAAATAGAAGTTAACAATACGTTTCAATCATCAAATCGAGAGAACAATTCAAAGAAGCCCAATACATCCCAGCCCAATATCAATGCTAAATTGCGTAGGATATTCCGGTGTAAAGTCTGCTGGAAATCCTTCTCCTCGAAGGAGAAGTTATATGAGCATTTAAAAGTTTCTCATATGTTCTACATATCGAGCGTGTGCAGCGCTTGGTACAAATCCCGAGTCAGATTGCTGAGACACTATTTGCACCAGCATTGCGTTATGAAACGCATGGAATGCTGCGTGTGCTTCGAGAAATTCGTATCGCCTGTGTTGTTGAAGCGACACATGGGTTTGCACTGCATCAAGGTGATGCAATCGAAGAGCGATAAGCTGTTCAACAAAGAGGTGGTCAAGTGTAATATGAACGCTAGGACGAACTCGTGCGGGGCGTGCGGTAAGCAATTTTGGTTGGGGGCTTGCTTGAGCGAACATCAACAGGTGTGTCATAAGATGAAGGTGCAATTGCAGAAATCACAAAAAGCGCACTGTCCCGTAAAAACGTCCCCACCGAAAAAAACGCTTAAGTCACCGTTGGCTGTTGCAAGCGGTACAGTGACTGAGCAGCGTCCCATCAAGTTATCCCCTGTCAAAAATGATCCTGGTGGAACCACATCACCGTCAGTAGCACAGCCGAAAAGATTGCTGAATGGCGTCGCGTTCGCGAAAGGGTACAACATCGACAATACCAGCACGAGCAAAGAGAAGTTTTCTTGCACCACTTGCAGCGCGCAGTTCCTGACTTTCCAGAATTTATGCTTGCACGAACGAACTTTCACTAAACCCGCTAAGTACGTCTGCAGTCACTGCAATACCGCCTTCACCACACCGAAATTATTGCAGAACCACATCACAGCAACCCACATGCTCGATACTCTAAAGAAGTACAAGTACTTTTGTACGTTCTGCACACAGGGCTTCCAAAAGAAGATCAATCTTCAGACCCACACGGGACACTTCCACAGTGGTCAAACGCCCATCATTCCCAAACCGTGGTTGGATACTACTTCCGACTGGGAGGTGAACACGGTGTGCACCGTTTGCAGTCTGATATTCGAGTCCAGCGAACGGTTCATCGAGCACAACATGTATTACTACAAGGGACAGATGTTTACCTGCACGTTCTGCAACCAAACCTTCCAAGGAATGTATATGCTGAACCACCACAATAAGTTGGTGCACTACACAGAGCACATGACGAAACAGTACCCGTACATGTGCAACATCTGCAACGAGGGTTTCACCCAGGAGTCCCAGCACTACGCGCATAAATTGCACGTTCATTCGGCAGCGCCCGAAACGAGCACACAGTCCCTGCAAGATCACACCTACGCCATCACGGTTGGGATCGGAGGATTGACGAATGGACCGACGATGAAATACAACTGTCAGGTTTGCTACATGAACTTCACGGTCGAGGAGGACCTACGGCAGCACCAGTTGGAGTACTCCAATAATGGTGACTACCTATGCAGCTACTGTGCCAGAAGATGTCCTACGGACACCATCCTCAGCAAGCACGAGAGTTTGTCGCACACCTGTGGCAATTTCACCGACTGTTACAAGTGTCGCTATTGCGAGGAGGTGCTTTCCACGTGTACAGCGTTGAAATGCCACGAAATACACTTCCACCAAAAGATCGCTAATCCCCAGATGAGCAGCGATAATCAGCCAATCGTGAATCAGAATGCAAAACCACCTGAAAACGTTGGGGACTCATTCGTTTGCGCGATTTGCAGCATGAAGTTCGTAACCTTGGAGAAATTGAACCATCATATCTTAGAATATTCGAACGTCGGTCTGTACAGTTGCCACATCTGCAGTCGGAGGTTCTCGGAGCTGTATCGCCTAGAAGTACACAAGCTAAAGCACTCGAACTTGAACTTCATACTGTCTAAGCATCACTGCCCCATATGTCGTGAGGGATTCGCAAACCCAATCAACGTTCAGATGCACGTGATGCATTTCCACAAAAGCGCAGCGGCCGATCAGTTGGTAGCAAAGGACGCGCAGGCCTTGCAGGCAGTCGACCTAAACGTCGAGATGGCCTCAAACAGTCTGTCTAAAACGAAGTCGACAATGTGTCCTGACTGTTTGGTGTCGTACCATTCCGAGAGTGCTTTGAAAAGGCACCTAGCACGCTTCGCGAACGAAGGACAACATGCCTGCGAGCACTGCGGCAGGAGGTTCCAATTCGTGAAGCTACTGAACGAACATTTGAAGAGGCACGCTGCAGGCATTGAACGCCTGAGGTACGCGTGTTCCGAATGCGACGATAGATTTGGTAATCCGGTGGCCAGATATCAGCATATCGTTCATCTTCATGGGAAGAGTAAGTGGAAAGGCGACGTGCCTAATTCCATAGTGGCTCGCCAGAATGTTGTAGCTGCTGCTGAAAAATTATGTGCAGATTCCGGTAAATCATTGCTTCGATTAGACACTTCACCGTATTTTACTGGCGAACCTATTGCTACAGCCAGTCCCGTGAGCAGATTAAGCGATAGTGAACCCTCATCATCAACTGATCAGCTGATTTACGATGGTGAACCTGTGGCTTCAGCCAGCACGGTGGACGGATTAAGCGATGGTCAGGGAAGATACTCATCATCAGCTGATCAGCTGATTTACGCTGGTGAACCTCGAGCGAGGTCCATACTATCAAAAATTAAACCTATGGCTACTGCCAATCGCGTGTGCGGATTAAGCGATCCTCAGAGAAGATCCTCACCATCAACTGATCAGCAGGCGGATACGACTTTAGCGACAGCTAAGCAAGAGACACTTGAAAATTTAAAGAGGACGAATACGTACTACGTTTGCCCCCTCTGCGACTTCAAGATCCAAACGCTGGAAAAATATATGTCACATTTGAAACTGGAACATGATGGGAAGATAATCCAGGGGACCATATGCGACAAGTCGCAGTCTTTGACTGGAGGCGTCATCAGCTGCTTGATCTGCGGGGTTACCTTCACCACGGAAGATGATCTCAAGATACACATCAAGGACGCGCACTTGAAGATTTGTCCTGCCAACATGAAAGACGCTGCCAGTTCTGCGGAGAACAACACAGATGCCGTGCAAATCATTTGGGAGAAGAAGCCGGATGCTGTCAAGCTGATTGGGGACCAGAGCGACTCGGAGGTCCATGTTCTGTGCTCGAGTTACCGCGCCCCGATCATGAACTATGACAAAACTGTTGCGAATACGGAATCAGTGGATTTAAGTGTTGATGATACCTTTCTCAGGATCAAAGACTTTGCTAAATTGGTGTAA
Protein Sequence: MYRGYWRDDWWTRDMTRNELHTGVRVKQEPRDTDDKSQDSILPFANISVKSTTSAETTVQGTQLVDVVNNKENELVSSTNRADMGKSGTDEVNTKKRKRLTFKNLKKPETVSEQVWKQHKRACRSSIERKPPESVSKESKIKEVECDSIASDASETDENNETDRTKETDKISEPPLTERTNDHVEHPFLQKKEKSLADSPTKRMRQTTITEFLSGFTRKDHVSPKEVDPIRETPKNVSANQSGRITEKVKETPKKATPKQNGRIIEKLNFSPEILKKVRQNRTVAECVSTPRNEKAPTIGESPGLRSKTGKEKTPFVEIHMGSDEMVALLHTKIKIEPEHKYNNPTPQNGSYNLRRVTRNSLDRPPSDVNTRPHIHRNRNSKGQFLTISNGTSKARSKEELLRAKFKCRDCKVNLVRCDTVVKTEIVDYVPSSSVNVHDDIEEVWRKKVKLKRIHVPLVRLNKLIKIEVNNTFQSSNRENNSKKPNTSQPNINAKLRRIFRCKVCWKSFSSKEKLYEHLKVSHMFYISSVCSAWYKSRVRLLRHYLHQHCVMKRMECCVCFEKFVSPVLLKRHMGLHCIKVMQSKSDKLFNKEVVKCNMNARTNSCGACGKQFWLGACLSEHQQVCHKMKVQLQKSQKAHCPVKTSPPKKTLKSPLAVASGTVTEQRPIKLSPVKNDPGGTTSPSVAQPKRLLNGVAFAKGYNIDNTSTSKEKFSCTTCSAQFLTFQNLCLHERTFTKPAKYVCSHCNTAFTTPKLLQNHITATHMLDTLKKYKYFCTFCTQGFQKKINLQTHTGHFHSGQTPIIPKPWLDTTSDWEVNTVCTVCSLIFESSERFIEHNMYYYKGQMFTCTFCNQTFQGMYMLNHHNKLVHYTEHMTKQYPYMCNICNEGFTQESQHYAHKLHVHSAAPETSTQSLQDHTYAITVGIGGLTNGPTMKYNCQVCYMNFTVEEDLRQHQLEYSNNGDYLCSYCARRCPTDTILSKHESLSHTCGNFTDCYKCRYCEEVLSTCTALKCHEIHFHQKIANPQMSSDNQPIVNQNAKPPENVGDSFVCAICSMKFVTLEKLNHHILEYSNVGLYSCHICSRRFSELYRLEVHKLKHSNLNFILSKHHCPICREGFANPINVQMHVMHFHKSAAADQLVAKDAQALQAVDLNVEMASNSLSKTKSTMCPDCLVSYHSESALKRHLARFANEGQHACEHCGRRFQFVKLLNEHLKRHAAGIERLRYACSECDDRFGNPVARYQHIVHLHGKSKWKGDVPNSIVARQNVVAAAEKLCADSGKSLLRLDTSPYFTGEPIATASPVSRLSDSEPSSSTDQLIYDGEPVASASTVDGLSDGQGRYSSSADQLIYAGEPRARSILSKIKPMATANRVCGLSDPQRRSSPSTDQQADTTLATAKQETLENLKRTNTYYVCPLCDFKIQTLEKYMSHLKLEHDGKIIQGTICDKSQSLTGGVISCLICGVTFTTEDDLKIHIKDAHLKICPANMKDAASSAENNTDAVQIIWEKKPDAVKLIGDQSDSEVHVLCSSYRAPIMNYDKTVANTESVDLSVDDTFLRIKDFAKLV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00860708; iTF_00861491; iTF_00864236; iTF_00863542; iTF_00864886;
90% Identity: -
80% Identity: -