Basic Information

Insect: Lasioglossum malachurum
Gene Symbol: -
Assembly: GCA_028455605.1
Location: CM052316.1:25317412-25323500[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00016 0.012 16.1 2.0 1 23 487 510 487 510 0.97

2 16 0.003 0.23 12.1 0.7 2 23 543 564 542 564 0.94

3 16 0.2 14 6.4 2.8 1 23 729 752 729 752 0.89

4 16 8.2 6.1e+02 1.3 3.9 1 22 762 783 762 785 0.89

5 16 0.95 71 4.2 0.2 2 19 808 825 807 828 0.90

6 16 1.5 1.1e+02 3.6 5.2 1 23 835 858 835 858 0.93

7 16 0.0057 0.42 11.2 2.5 1 23 869 892 869 892 0.94

8 16 0.16 12 6.6 0.1 1 21 925 945 925 946 0.95

9 16 0.0025 0.18 12.4 0.1 1 21 1038 1058 1038 1059 0.95

10 16 0.036 2.6 8.7 5.6 1 23 1066 1088 1066 1088 0.97

11 16 0.027 2 9.1 1.7 1 23 1098 1121 1098 1121 0.94

12 16 0.0069 0.51 10.9 0.1 2 21 1158 1177 1157 1178 0.93

13 16 0.00054 0.04 14.4 4.0 1 23 1185 1207 1185 1207 0.96

14 16 3.4 2.5e+02 2.5 0.2 1 23 1216 1239 1216 1239 0.86

15 16 0.014 1.1 9.9 0.2 1 23 1375 1398 1375 1398 0.95

16 16 0.00011 0.0084 16.6 0.0 2 23 1420 1442 1419 1442 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00016	0.012	16.1	2.0	1	23	487	510	487	510	0.97
2	16	0.003	0.23	12.1	0.7	2	23	543	564	542	564	0.94
3	16	0.2	14	6.4	2.8	1	23	729	752	729	752	0.89
4	16	8.2	6.1e+02	1.3	3.9	1	22	762	783	762	785	0.89
5	16	0.95	71	4.2	0.2	2	19	808	825	807	828	0.90
6	16	1.5	1.1e+02	3.6	5.2	1	23	835	858	835	858	0.93
7	16	0.0057	0.42	11.2	2.5	1	23	869	892	869	892	0.94
8	16	0.16	12	6.6	0.1	1	21	925	945	925	946	0.95
9	16	0.0025	0.18	12.4	0.1	1	21	1038	1058	1038	1059	0.95
10	16	0.036	2.6	8.7	5.6	1	23	1066	1088	1066	1088	0.97
11	16	0.027	2	9.1	1.7	1	23	1098	1121	1098	1121	0.94
12	16	0.0069	0.51	10.9	0.1	2	21	1158	1177	1157	1178	0.93
13	16	0.00054	0.04	14.4	4.0	1	23	1185	1207	1185	1207	0.96
14	16	3.4	2.5e+02	2.5	0.2	1	23	1216	1239	1216	1239	0.86
15	16	0.014	1.1	9.9	0.2	1	23	1375	1398	1375	1398	0.95
16	16	0.00011	0.0084	16.6	0.0	2	23	1420	1442	1419	1442	0.94

Sequence Information

Coding Sequence: ATGGCTCGAGTTTATGTATATGAACGTCCAGTCGATGCTGTCGTGGCGGATGTGTCCTTCTATGAGAAGCATCACCTTGTTACTGGGGTACGGGTGAAACAAGAGCCACGTGACACGGATGACAAAAGTCAGGACAGTACTTTGCCATTGGCAAATATTAATGTAAAGAGTACCACATCGACTGAAACGACTGTTCAAGGGACACAACTGGTTGACGTTGTAAATAATAAAGAGAATGAGCTTGTATCATCTACGAACCGTGCCGGTAAAGGCAAATCGGATACGGAGGAAGTGAATACGAAAAAGCGTAAACATTTAACATTTAAGAACTTGATAAAGTCGGAAACGTTGTCTGAGCAAGTGTGGCAACAATATAAAAGGGCCTGCCGTAGTAGCTTTGAACGTAAACCTCCGGTACCACTAAGCAACAAATCAGAAATTACGGACATAGAATGCGACAATATTACAAGTAATGCCAGTGAAACTGATGAAAACAATGAAACGGATACGACCAAGGAGACCGATAAAATCAGTGAATCGCCATTGACAGAACGCACTAACGGTCACGTAGAACATCCTTTTGTACAGAAGAAAGAAAATAGTCCAGCCGATAGTCCTACCAAAAGAATGAGACAAACAACTATGATAGAGTTCCTTTCAGGATTCACAAGAAAAGCTCACGTTTCTCCGAAAAAGGTTGACCCTACAAGAGAAACCCCGAAAAAAGTCAGTGCTAAACAATCAGGAAGAATAACGGAGAAAGTAGGGGAGACACCGAAAAAAGCCACACCTAAGCAAAATGGAAAAATAACAGAGAAATTCGATTTCTCGGCAGAAACTCCGAAAAAGGTTAGGACTATTAGTGAAAGTTCTGGGTTGAGTAGCAAAACTGGCAAGGAGAAAAAACCATTTGTCGAGATACACATGAGTTCTGATGAGATGGTGGCCTTATTGCATACAAAAATTAAAATCCAACCAGAAGATGAATGTATCAATTCTACGCCACAGAATGGATCTTACAACCTTAGACGCGTGACAAGAAATAGTCTTGATCGACCGCCGAGTGACGTGAATACATGGCTTCGTGTTAATAGAAGCCGTAATTATAAAGGGCAGTTCCTTTCCCTGCCTAATGAGACACCGAAGGCTCGGTCGAAGGAGCAGCTACTGAGGGCCAAGTTCAAATGTAAAGACTGCAAAGTTAATCTAGTTAAATGCGACATGGTTGTCAAAACAGAAATTGTCGATTATGTCCCGTCGACTCCGGTAAACGTAGATGATATCGAGGCGGTTTGGAGGAAGAAGGTTAACTTAAAGAGAGTCCACGTACCATTGGTCAGACTGAGGAAGCTGATAAAAGTAGAAGTTAACGATACGTTTCAATCATCAAATCGAGAGAACAATCCAGAGAAGCCCAATGCATCTCGGCCTAATGTCAAAGCTAAATTGCGGAAGATATTTCGGTGTAAAGTCTGCTGGAAGTACTTCTCCTCGAAGGAGAAGTTATACGAGCATCTGAAAGTCACTCATGTGTTCTACATATCGAGCGTGTGCAGCGCTTGGTACAAATCCCGAGCCAGATTGCTGAGACACTATTTGCACCAGCACTGCGTTATGAAACGCATGGAGTGCTGCGTGTGCTTCGAGAAATTCGTGTCGCCTGTGTTGTTGAAGCGGCACATGGGTCTGCACTGCGTCAAGGTGTTGCAATCGAAGAGCGATAAGGTGTTCAACAAAGAGGCGGTCAAGTGTAATGTGAACTCTAGGACGAACTCGTGCGGGGCGTGCGGTAAGCAATTTTGGTTGGGGGCTTGCTTGAGCGAACATCAACAAGTGTGTCATAAAATGAAGGCACAATTGCAGAAATCACAGAAAGCGCAGTGTCCCGTGAAAACGTCCCCAACGAAAAAAATGCATGAGTCACCGTTGGATGTTGCAAGCGGTACAGTGACCAAGCAGCATCCCATCAAGTTATCCCCTGTCAAAAATAATCCTCGTCGAACTGAATCACCGTCAGTAGTACAACCGAAAAGATTGCTGAAAGGCGTCGCGCTCGCGAAGGGGTACAACATCGACATTATCAGCACGAGCAAAGAGAAGTTCTCCTGCACCACTTGCAGCGCGCAGTTCCTGTCTTTCCAGAATTTATGCTTGCACGAACGAACTTTCACTCAAGCCGCTAAGTACGTCTGCGCGTGCTGTAATACCGCCTTCACCACACACAAATTATTGCAGAACCACGTCACAGCCACCCACATGCTCGATACTCTAAAGAAGTACAAGTACTTTTGTACGTTCTGCACACAGGGCTTCCTAAAGAAGATCAATCTTCAGACCCACACGGGTCACTTCCACAGTGGCCAAACGCCCATAATTCCCAAACCGTGGTTGGATACTACTTCTGACTGGGAGATCAACACGATGTGCAGCGTTTGCAATCTGAAATTCGAGTCCAGCGAACGGTTCATCGAGCACAACATGTACTATTACAAGGGACAGATGTTTACCTGCACGTTCTGCAGCCAAACCTTCCATGGAATGTACATGCTGAACCATCACAACAAGTTGGTGCACTACACGGACGACATGACGAAACAGTACCCGTACATGTGCAACATCTGCAACGAGGGTTTCACCCAGGACTCCCAGTATCACGCGCATAAATTGCACGTTCATTCGGCAGCGCCCGAAACCAGCACAAAGTCCCTGCAAGATCACACCTACGCCATCACGGTTGGGGTCGGAGGATTGACGAATGGACCGACGATGAAATACAACTGTGAGGTTTGCTACATGAACTTCATGGTCGAAGAGGACCTACGGCAGCACCAGTTGGAGTACTCCAATAATGGTGACTACCTATGCAGCTACTGCGCCAGAAGATGTCCTACGGACACCATCCTTAGCAAGCACGAGAGTTTGTCGCACACCTGTGGCAATTTCACCGACTGCTACAAGTGTCGCTACTGCGAGGAGGTGCTTTCCACGTGTACAGCGTTGAAATGCCACGAAATACACTTCCACCAAAAGATCTCTAATCCCCAGATGAGCAGCGATAATCAGCCAATCGTGAATCAGAGTGCAAAATCACCAGGAAACGTTGGGGACCCATTCGTCTGCGTGATTTGCAACATGAAGTTCGTAACCTTGGAGAAATTGAACCAGCATATCTTAGAATATTCGAACGTCGGTATGTACTGTTGTCACATCTGCAGCCGGAGGTTCTCGGAGCTGTATCGCCTAGAAGTCCATAAACTAAAGCACTCGAACTTGAACTTCATATTGTCTAAGCATCACTGCCCCATATGTCGTGAGGGATTCGCAAATCCAATCAACGTTCAGATGCATGTGATGCACTTCCACAATAGCGCATCGACCGATCAGTTGGTAGCAAAGAACGCGGAGACCTTGCAGGCAGTCGACCTAAACGTCGAGACGGCCTCAAACAGTCCATCTAAGACGAAGTCGACAACGTGTCCTGACTGTTTGGTGTCGTACGATTCCGAGAGTGCTTTGAAAAGGCACCAAGCACGCTTCGGGAACAAAGGACAACACGCCTGCGAGCACTGCGGCAGGAGGTTTCAATCCGTGAAGCTGCTGAAGGAACATTTGAGGAGGCACGCTGCAGGCATTGAACGCCTGAGGTACGCGTGTTCGGAATGCGACGATAGATTTGGTAATCCGGTTGCCAGATATCAGCATATTGTTCATCTTCATGGGAAGAGTAAGTGGAAAGGCGATGTACCTAATGCCATAGCGGCTCGCCAGGTTGATGAAGTTGCTGCTAAAAAATTAAAGGATGCAGATTCCGGTGTATCATTGCTTCGATCAGACACCTCAACGTATTACACCGGTGAACCTATTGCTACAGCCAGCACCGTGGACGGATTAAGCGATCCTCAGGGAAGATCCTCATCATCAACTGATCAGCAGATTTACGCTGGTGAACCTCGAGCAAACTCCACACTATCAAAAATTGAACCTATGGCTACTGCCAGTCACGTGCACGGATTAAGCGATCCTCAGGGAAGATTCTCACCATCAACTGATCAGCAGGCGGATATGACTACAGCGGCAGCTAAGCAAGATCCACTTGAAAATGTAAAGAGGATGACTACGTGCTACGACTGCCCCTTCTGCGACTTCAGGATCCAAACGCCAGAACAATTGACGTCACATTTGAATCTGGAACATGATGGGAACATAATCCAGGGGACCATATGCGACAAGTCGCAGTCTTTGACTGGAGGCGTCATCAGCTGCATGATCTGCGGAGTCACCTTCACCACGGAAGACGATCTTAAGATACACCTCAAGGCCGCGCACGTGAAGATTTGCCCTGCCAACATGGAAGACGCTGCCGATTCTGCGGAGAACAACACAGATGCCCTGCAAATCGTTTGGGAGAAGAAGCCGAACGCTGTCGAGCTGATTGGGGACCAGGGCGACTCGGAAGTCCATGTTCTGTGCTCGAGTTACCGCGCTCCGATCATTAACTATGACAAAACTGTTGCGGATACGGAATCAGTGGATTTAAGTGTTGATGATACCTTTCTCAGGATCAAAGACTTTGCCAAATTGGTGTAA
Protein Sequence: MARVYVYERPVDAVVADVSFYEKHHLVTGVRVKQEPRDTDDKSQDSTLPLANINVKSTTSTETTVQGTQLVDVVNNKENELVSSTNRAGKGKSDTEEVNTKKRKHLTFKNLIKSETLSEQVWQQYKRACRSSFERKPPVPLSNKSEITDIECDNITSNASETDENNETDTTKETDKISESPLTERTNGHVEHPFVQKKENSPADSPTKRMRQTTMIEFLSGFTRKAHVSPKKVDPTRETPKKVSAKQSGRITEKVGETPKKATPKQNGKITEKFDFSAETPKKVRTISESSGLSSKTGKEKKPFVEIHMSSDEMVALLHTKIKIQPEDECINSTPQNGSYNLRRVTRNSLDRPPSDVNTWLRVNRSRNYKGQFLSLPNETPKARSKEQLLRAKFKCKDCKVNLVKCDMVVKTEIVDYVPSTPVNVDDIEAVWRKKVNLKRVHVPLVRLRKLIKVEVNDTFQSSNRENNPEKPNASRPNVKAKLRKIFRCKVCWKYFSSKEKLYEHLKVTHVFYISSVCSAWYKSRARLLRHYLHQHCVMKRMECCVCFEKFVSPVLLKRHMGLHCVKVLQSKSDKVFNKEAVKCNVNSRTNSCGACGKQFWLGACLSEHQQVCHKMKAQLQKSQKAQCPVKTSPTKKMHESPLDVASGTVTKQHPIKLSPVKNNPRRTESPSVVQPKRLLKGVALAKGYNIDIISTSKEKFSCTTCSAQFLSFQNLCLHERTFTQAAKYVCACCNTAFTTHKLLQNHVTATHMLDTLKKYKYFCTFCTQGFLKKINLQTHTGHFHSGQTPIIPKPWLDTTSDWEINTMCSVCNLKFESSERFIEHNMYYYKGQMFTCTFCSQTFHGMYMLNHHNKLVHYTDDMTKQYPYMCNICNEGFTQDSQYHAHKLHVHSAAPETSTKSLQDHTYAITVGVGGLTNGPTMKYNCEVCYMNFMVEEDLRQHQLEYSNNGDYLCSYCARRCPTDTILSKHESLSHTCGNFTDCYKCRYCEEVLSTCTALKCHEIHFHQKISNPQMSSDNQPIVNQSAKSPGNVGDPFVCVICNMKFVTLEKLNQHILEYSNVGMYCCHICSRRFSELYRLEVHKLKHSNLNFILSKHHCPICREGFANPINVQMHVMHFHNSASTDQLVAKNAETLQAVDLNVETASNSPSKTKSTTCPDCLVSYDSESALKRHQARFGNKGQHACEHCGRRFQSVKLLKEHLRRHAAGIERLRYACSECDDRFGNPVARYQHIVHLHGKSKWKGDVPNAIAARQVDEVAAKKLKDADSGVSLLRSDTSTYYTGEPIATASTVDGLSDPQGRSSSSTDQQIYAGEPRANSTLSKIEPMATASHVHGLSDPQGRFSPSTDQQADMTTAAAKQDPLENVKRMTTCYDCPFCDFRIQTPEQLTSHLNLEHDGNIIQGTICDKSQSLTGGVISCMICGVTFTTEDDLKIHLKAAHVKICPANMEDAADSAENNTDALQIVWEKKPNAVELIGDQGDSEVHVLCSSYRAPIINYDKTVADTESVDLSVDDTFLRIKDFAKLV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00865572;
90% Identity: -
80% Identity: -