Basic Information

Insect: Lasioglossum oenotherae
Gene Symbol: -
Assembly: GCA_028455765.1
Location: CM052294.1:5186442-5192964[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00013 0.011 16.3 1.9 1 23 424 447 424 447 0.97

2 16 0.0027 0.22 12.2 0.7 2 23 480 501 479 501 0.94

3 16 0.0064 0.53 11.0 0.8 1 23 637 660 637 660 0.90

4 16 0.43 36 5.2 4.3 1 22 670 691 670 693 0.89

5 16 0.92 76 4.2 0.2 2 19 716 733 715 736 0.89

6 16 0.05 4.1 8.2 2.9 1 23 743 766 743 766 0.93

7 16 0.19 16 6.4 3.6 1 23 777 800 777 800 0.88

8 16 0.033 2.7 8.8 0.1 1 21 833 853 833 854 0.95

9 16 0.0078 0.65 10.7 0.1 1 21 946 966 946 967 0.94

10 16 0.012 0.96 10.2 3.4 1 23 974 996 974 996 0.98

11 16 0.0048 0.4 11.4 1.8 1 23 1006 1029 1006 1029 0.94

12 16 0.018 1.5 9.6 0.0 2 20 1066 1084 1065 1086 0.93

13 16 0.0012 0.097 13.3 4.1 1 23 1093 1115 1093 1115 0.96

14 16 1.2 96 3.9 0.1 1 23 1124 1147 1124 1147 0.86

15 16 0.075 6.2 7.6 0.3 1 23 1282 1305 1282 1305 0.96

16 16 6.9e-05 0.0057 17.2 0.0 2 23 1327 1349 1326 1349 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00013	0.011	16.3	1.9	1	23	424	447	424	447	0.97
2	16	0.0027	0.22	12.2	0.7	2	23	480	501	479	501	0.94
3	16	0.0064	0.53	11.0	0.8	1	23	637	660	637	660	0.90
4	16	0.43	36	5.2	4.3	1	22	670	691	670	693	0.89
5	16	0.92	76	4.2	0.2	2	19	716	733	715	736	0.89
6	16	0.05	4.1	8.2	2.9	1	23	743	766	743	766	0.93
7	16	0.19	16	6.4	3.6	1	23	777	800	777	800	0.88
8	16	0.033	2.7	8.8	0.1	1	21	833	853	833	854	0.95
9	16	0.0078	0.65	10.7	0.1	1	21	946	966	946	967	0.94
10	16	0.012	0.96	10.2	3.4	1	23	974	996	974	996	0.98
11	16	0.0048	0.4	11.4	1.8	1	23	1006	1029	1006	1029	0.94
12	16	0.018	1.5	9.6	0.0	2	20	1066	1084	1065	1086	0.93
13	16	0.0012	0.097	13.3	4.1	1	23	1093	1115	1093	1115	0.96
14	16	1.2	96	3.9	0.1	1	23	1124	1147	1124	1147	0.86
15	16	0.075	6.2	7.6	0.3	1	23	1282	1305	1282	1305	0.96
16	16	6.9e-05	0.0057	17.2	0.0	2	23	1327	1349	1326	1349	0.94

Sequence Information

Coding Sequence: ATGGCTCGAGTTTATGTATATGAACGTCCAGTCGATTCTGTCCTGGCAGATGTGTCCTTCTACGAGAAGCATCACCTTCTTACTGGGGTACGGGTGAAACAAGAGCCACGTGACACGGATGACAAAAGTCAGGACAGTATTTTGCCATTTACAAATATTAGTGTAAAGAGTATCACATCGGCTGAAACGACTGTTCAAGGGACAAAACTGGTGGACGTTGTAAATAACAAAGAGAATGAGCTTGTATCATCTACTAACCGTGCCGGTAGAGGAAAATCGGGTACGGACGAGCCGGAATCGGTGTCTGAGCAAGTGTGGCAACAACGTAAAAGGACCTGCCGTAGTAGCCTTGAACGTAAACCTCCAGAACTAGTAAGCAAAAAATCGGAAATTAAGGACGTAGAATGCGACAATGTTACAAGTGATGCCAGTGAAACTGATGGAAACAATGAAACGGATACGACCAAGGAGACCGATAAAGTCAGTGAACCGCCATTGACAGAGCGCATTAATGGTCATGTAGAACATCCTTTTGTACAGAATAAAGAAAAGAGTCCAGCCGATAGTCCTACCAAAAGAATGAGACAAACAACTATGACAGAGTTCCTTTTAGGATCCACGAAAAAAGAATACGTTTCTCCGAAAAAGGTTGATCCTACAAGAGAAACCCCGAAAAAAGTAAGTGGTAACCAATCAGGAAGAATAACGGAGAAAGTAAAGGAGACACCGAAAAAAGCCACACCTAAGCAAAATGGAAGAATAACAGAGAAATTCAATTTCTCGGCAGAAACTCCGAAAAGGGTTAGACAAAACGGAACAGTAACAGAATTCGTTTCCACTCCCTGTAATGAGAAAGCGCCGACTGTTGGTGAAAGTTCTGGGTTAAGTAGCAAAACTGGCAAGGAGAAAAAAACCATTTGGCAGTCCCTTCCCTTTTCTAATGAGACATCGAAGGCTCGGTCGAAGGAGGAGCTACTGAGGGCCAAATTCAAATGTAAAGACTGCAAAGTTAATCTAGTTAGATGCGACACGGTTGTCAAAACAGAAATTGTCGATTATGTTCCGTCGACTCCGGTAAACGTATATGATGATATCGAGGAGGTTTGGAGAAAGAAGGTTAAGTTACGGAGAATCCACGTTCCATTGGTCAGACTGAACAACCTGATAAAAATAGACGTTAACAATACGTTTCAATCATCAAATCGAGAGAACAATCCAGGGAAGCCCAATGCATCTCAGCCTAATGTCAATGCTAAATTGCGTAGGATATTCCGGTGTAAAGTCTGCTGGAAATACTTCTCCTCGAAGGAGAAGTTGTACGAGCATTTAAAAGTTTCTCATATGTTCTACATATCGAGCGTGTGCAGCGCTTGGTACAAATCCCGAGCCAGATTGCTGAGACACTATTTGCACCAGCATTGCGTTATGAAACGTATGGAATGCTGCGTGTGCTTCGAGAAATTCGTGTCGCCTGTGTTGTTGAAGCGACACATGGGTTTGCACTGCATCAAGGTGATGCAATCAAAGAGCGATAAGCTGTTCAACAAAGAGGCGGTCAACTGTAATATGAACTCTAAGACGAACTCGTGTGGGGCGTGCGGTAAGCAATTTTGGTTGGGGGCTTGCTTGAGCGAACATCAACAGTCACCGTTGGCTGTTGCAAGCGGTACAGTGACCGAGCAGCGTCGCATCAAGTTATCCCCTGTCAAAAATCATCCTCGTGGAACCGAATCACCGTCAGTAGCACAGCCGAAAAGATTGCTGAATGGCGTCGCATTCGCGAAGGGGTACAACATCGACAATAGCAGCACGAGCAAAGAGAAGTTTTCTTGCATCACTTGCAGCGCGCAGTTCCTGACTTTCCAGAATTTATGCTTGCACGAACGAACTTTCACTCAAGCCGCTACGTACGTCTGCGACTGTTGCAATACCGCATTCACCACACCGAAATTATTGAAGAACCACGTCGCAGCAACCCACATGCTCGATACTCTAAAGAAGTACAAGTACTTTTGTACGTTCTGTACACAGGGCTTCCAAAAGAAGATCAATCTTCAAACCCACACGGGACACTTCCACAGTGGTCAAACGCCCATCATTCCCAAACCGTGGTTGGATACTACTACCAACTGGGAGGTGAACACGGTGTGCACCGTTTGCAACCTGAAATTCGAGTCCAGCGAACGATTCGTCGAGCACAACATGTACTACTACAAGGGACAGATGTTTACCTGCACGTTCTGCAACCAAACCTTCGATGGAATGTACATGCTGAACCATCACAATAAGTTGGTGCACTACACGGAGGACATGACGAAACAGTACACGTACATGTGCAACATCTGCAACGAGGGTTTCACCCAGGAGTCTCAGCACCACGCGCATAAATTGCACGTTCATTCGGCAGCGCCCGAAACCAGCACACAGTCCCTGCAAGATCACACCTACGCCATCACGGTTGGGATCGACGGATTGACGAATGGACCGACGATGAAATACAACTGTCAGGTTTGCAACATGAACTTCATGGTCGAGGAGGACCTACGGCAGCACCAGTTGGAGTACTCCAATAATGGTGACTACCTGTGCAGCTACTGTGCCAGAAAATGTCCTACGGACAGCATCCTCAGCAAGCACGAGAGTTTGTCGCACACCTGTAGTAATTTCACCGACTGTTACAAGTGTCGCTATTGCCAGGAGGTGCTTTCCACGTGTACAGCGTTGAAATGCCACGAAATACACTTTCACCAAAAGATCTCTAATCCCCAGATGAGCAGCGATAATCAGTCAATCGTGAATCAGAGTGCAAAACCACCTGGAAACGTTAGGGACCCATTCGCCTGCGCGATTTGCAGCATGAAGTTCGCAACCTTGGAGAAATTGAACCATCATATCTTAGAATATTCGAACGTCGGTCTGTACAGTTGCCACCTCTGCAGCCGGAGGTTCTCGGAGCTGTATCGCCTAGAAGTCCACAAGCTAAAGCACTCGAACTTGAACTTCATACTGTCTAAGCATCACTGCCCCATATGTCGTGAGGGATTCGCAAATCCAGCCAACGTTCAGATGCACTTGATGCACTTCCACAAAAGCGCAGCGACCGATCAGTTGGCAGCAAAGGACGCACAGACCTCGCAGGCAGTCGACCTAAACGTCGAGATGGCCTCAAACAGTCCGTCTAAGACGAAGTCGACAATGTGTCCTGATTGTTTGGTGTCGTACGATTCCGAAAGTGCTTTGAAAAGGCACCTAGTACGCTTCGCGAACGAAGGACAACATGCCTGCGAGCACTGCGGAAGGAGGTTCCAATCCGTGAAGCTACTGAAGGAACATTTGAAGAGGCACGCTGCAGGCATTGAACGCCTGAGGTACGCGTGTCCCGAATGCGACGATAGATTTGGTAATCCGGTGGCCAGATATCAGCATATCGTTCATTTGCATGGGAAGAGTAAGTGGAAAGGCGCCGTGCCTAATTCCATAGTGGCTCGCCAGAATGCTGAAGTTGCTGCTGGAAAATTATGTGCAGATTCCGGTGAATCATTGCTTCGATCAGAGACCTCAACGTATTTCACCGGTGAACCTATTGCTAGAGCCAGTCCCGTGAGCAGATTAAGCGGTAGTGAGGGAAGGCCCTCATCATCAACTGATCAGCTGATTTACGCTGGTGAACATCAAGCGTCGCCCACAGTATCAAAAACTGTACCTATGGCTACAGCCAATCACGTGTACGGATTAAGCGATCCTCAAGGAAGATCCTCATCATCAACTGATCAGCAGGCGGATATGACTGTAGCGGCAGCTAAGCATGAGACACTTGAAAATTTAAAGAGGATGACTACGTACTACGTTTGCCCCCTCTGCGACTTCAAGATCCAAACGTTGGAAGAATATACGTCACATTTGAAACAGGAACATGATGGGAAGATAATCCAGGGGACCATATGCGACAAGTCGCAGTCTTTGACTGAAGGCGTCATCAGCTGCTTGATCTGCGGGGTCACCTTCACCACGGAAGACGATCTCAAGATACACATCAAGGACGCGCACGTCAAGATTCGTCCTGCCATCATGAAAGACGCTGCCGGTTCTGCGGAGAACAACACAGATACCGTGCAAATCGTTTGGGAGAAGAAGCCGGACGCCGTCAAGCTGATTGGGGACCAGAGCGACTCGGAGGTCCATGTTCTGTGCTCGAGTTACCGCGCCCCGATCATGAACTATGACAAAACTGTTGCGAATACGGAATCAGTGGATGTAAGTGTTGATGATACCTTTCTCAGGATCAAAGACTTTGCCAAATTGGTGTAA
Protein Sequence: MARVYVYERPVDSVLADVSFYEKHHLLTGVRVKQEPRDTDDKSQDSILPFTNISVKSITSAETTVQGTKLVDVVNNKENELVSSTNRAGRGKSGTDEPESVSEQVWQQRKRTCRSSLERKPPELVSKKSEIKDVECDNVTSDASETDGNNETDTTKETDKVSEPPLTERINGHVEHPFVQNKEKSPADSPTKRMRQTTMTEFLLGSTKKEYVSPKKVDPTRETPKKVSGNQSGRITEKVKETPKKATPKQNGRITEKFNFSAETPKRVRQNGTVTEFVSTPCNEKAPTVGESSGLSSKTGKEKKTIWQSLPFSNETSKARSKEELLRAKFKCKDCKVNLVRCDTVVKTEIVDYVPSTPVNVYDDIEEVWRKKVKLRRIHVPLVRLNNLIKIDVNNTFQSSNRENNPGKPNASQPNVNAKLRRIFRCKVCWKYFSSKEKLYEHLKVSHMFYISSVCSAWYKSRARLLRHYLHQHCVMKRMECCVCFEKFVSPVLLKRHMGLHCIKVMQSKSDKLFNKEAVNCNMNSKTNSCGACGKQFWLGACLSEHQQSPLAVASGTVTEQRRIKLSPVKNHPRGTESPSVAQPKRLLNGVAFAKGYNIDNSSTSKEKFSCITCSAQFLTFQNLCLHERTFTQAATYVCDCCNTAFTTPKLLKNHVAATHMLDTLKKYKYFCTFCTQGFQKKINLQTHTGHFHSGQTPIIPKPWLDTTTNWEVNTVCTVCNLKFESSERFVEHNMYYYKGQMFTCTFCNQTFDGMYMLNHHNKLVHYTEDMTKQYTYMCNICNEGFTQESQHHAHKLHVHSAAPETSTQSLQDHTYAITVGIDGLTNGPTMKYNCQVCNMNFMVEEDLRQHQLEYSNNGDYLCSYCARKCPTDSILSKHESLSHTCSNFTDCYKCRYCQEVLSTCTALKCHEIHFHQKISNPQMSSDNQSIVNQSAKPPGNVRDPFACAICSMKFATLEKLNHHILEYSNVGLYSCHLCSRRFSELYRLEVHKLKHSNLNFILSKHHCPICREGFANPANVQMHLMHFHKSAATDQLAAKDAQTSQAVDLNVEMASNSPSKTKSTMCPDCLVSYDSESALKRHLVRFANEGQHACEHCGRRFQSVKLLKEHLKRHAAGIERLRYACPECDDRFGNPVARYQHIVHLHGKSKWKGAVPNSIVARQNAEVAAGKLCADSGESLLRSETSTYFTGEPIARASPVSRLSGSEGRPSSSTDQLIYAGEHQASPTVSKTVPMATANHVYGLSDPQGRSSSSTDQQADMTVAAAKHETLENLKRMTTYYVCPLCDFKIQTLEEYTSHLKQEHDGKIIQGTICDKSQSLTEGVISCLICGVTFTTEDDLKIHIKDAHVKIRPAIMKDAAGSAENNTDTVQIVWEKKPDAVKLIGDQSDSEVHVLCSSYRAPIMNYDKTVANTESVDVSVDDTFLRIKDFAKLV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00865572;
90% Identity: -
80% Identity: -