Basic Information

Insect: Lasioglossum albipes
Gene Symbol: -
Assembly: GCA_000346575.1
Location: KB640422.1:685669-699025[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 1.7 1.4e+02 3.4 1.7 2 23 151 173 150 173 0.89

2 20 0.038 3.1 8.6 0.1 3 20 180 197 179 199 0.93

3 20 0.39 31 5.4 4.9 2 23 215 237 215 237 0.89

4 20 0.00013 0.011 16.3 2.1 1 23 595 618 595 618 0.97

5 20 0.0033 0.26 12.0 0.7 2 23 651 672 650 672 0.94

6 20 8.7 7e+02 1.2 2.3 1 22 809 830 809 830 0.94

7 20 0.019 1.5 9.6 1.4 1 23 837 860 837 860 0.90

8 20 8.8 7e+02 1.2 3.9 1 22 870 891 870 893 0.89

9 20 1 80 4.1 0.1 2 19 916 933 915 936 0.90

10 20 0.027 2.2 9.1 3.6 1 23 943 966 943 966 0.94

11 20 0.0062 0.49 11.1 2.5 1 23 977 1000 977 1000 0.94

12 20 0.18 14 6.5 0.1 1 21 1033 1053 1033 1054 0.95

13 20 0.0043 0.35 11.6 0.1 1 21 1146 1166 1146 1167 0.95

14 20 0.0038 0.3 11.8 3.1 1 23 1174 1196 1174 1196 0.98

15 20 0.15 12 6.7 3.3 1 23 1206 1229 1206 1229 0.93

16 20 0.0074 0.6 10.8 0.1 2 21 1266 1285 1265 1286 0.93

17 20 0.0046 0.37 11.5 3.1 1 23 1293 1315 1293 1315 0.96

18 20 3.7 2.9e+02 2.4 0.2 1 23 1324 1347 1324 1347 0.86

19 20 0.15 12 6.7 0.3 1 23 1483 1506 1483 1506 0.96

20 20 0.001 0.08 13.6 0.0 3 23 1529 1550 1529 1550 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	1.7	1.4e+02	3.4	1.7	2	23	151	173	150	173	0.89
2	20	0.038	3.1	8.6	0.1	3	20	180	197	179	199	0.93
3	20	0.39	31	5.4	4.9	2	23	215	237	215	237	0.89
4	20	0.00013	0.011	16.3	2.1	1	23	595	618	595	618	0.97
5	20	0.0033	0.26	12.0	0.7	2	23	651	672	650	672	0.94
6	20	8.7	7e+02	1.2	2.3	1	22	809	830	809	830	0.94
7	20	0.019	1.5	9.6	1.4	1	23	837	860	837	860	0.90
8	20	8.8	7e+02	1.2	3.9	1	22	870	891	870	893	0.89
9	20	1	80	4.1	0.1	2	19	916	933	915	936	0.90
10	20	0.027	2.2	9.1	3.6	1	23	943	966	943	966	0.94
11	20	0.0062	0.49	11.1	2.5	1	23	977	1000	977	1000	0.94
12	20	0.18	14	6.5	0.1	1	21	1033	1053	1033	1054	0.95
13	20	0.0043	0.35	11.6	0.1	1	21	1146	1166	1146	1167	0.95
14	20	0.0038	0.3	11.8	3.1	1	23	1174	1196	1174	1196	0.98
15	20	0.15	12	6.7	3.3	1	23	1206	1229	1206	1229	0.93
16	20	0.0074	0.6	10.8	0.1	2	21	1266	1285	1265	1286	0.93
17	20	0.0046	0.37	11.5	3.1	1	23	1293	1315	1293	1315	0.96
18	20	3.7	2.9e+02	2.4	0.2	1	23	1324	1347	1324	1347	0.86
19	20	0.15	12	6.7	0.3	1	23	1483	1506	1483	1506	0.96
20	20	0.001	0.08	13.6	0.0	3	23	1529	1550	1529	1550	0.96

Sequence Information

Coding Sequence: ATGGCTCGAGTTTATGTATATGAACGTCCAGTCGATGCTGTCCTAGCAGATGTGTCCTTCTACGAGAAGCATCACCTTGTTACTGGGGTACGGGTGAAACAAGAGCCACGTGACACGGATGATAAAAGTCAGGACAGTACTTTGCCATTTGCAAATATTAATGTAAAGAGTGCCACATCAGCTCAAACGACTGTTCAAGGGACGCAACTGGTGGACGTTGTAAATAACAAGGAGAATGAGCTTGTATCATCTACGAACCGTGCCGGTAAAGGCAAATCGGATACGGACGAGGTGAATACGAAGAAGCGTAAACGTTTAACATTTAAGAATTTGAAAAAGCCGAAAACGTTGTCCGAGCAAGTGTGGCGACAACATAAAAGGGCCTGCCGTAGTAGCCTTGAACGTAAACCTCCGGAACCAGTCGGCAAAGAATTAGAAATTACGGACGTAGAATGCGATGTATGTTATTTAAAATTTAGAACAGAGAGAGCACTTAAGTGTCACAGAGAATATTACCATGAGATAGTCGATCGTATCTGTGATAAATGCCAAACGGTATTTCGATCGATTGACGGGTTAAAAGATCATAAATTGCTAGGTACATGCAAGGTACAATCACAAACGAAGTGGAAAAGCGAAAATGTCTGTTGTTTCTGTAATCGGAAGTTCTCGACCAAACCATATTTACAGGGTCACGTATTCCACACTCATACTGAATTGTTACAGAATATTACAAGTGATGCCAGTGAAACTGATGAGAACAATGAAACGGATACGACCAAGGAGACCGATAAAATCAGTGAACCGCCATTGACAGAGCGCACTAACGGTCACGTAGAACATCCTTTTGTACAGAAGAAAGAAAAGAGTCCAGCCGATAGTCCTACCAAAAGAATGAGACAGACAACTATGATAGAGTTCCTTTCAGGATTCAAGAGAAAAGAATACGGTTCTCCGAAAAAGGTTGATCCTACAAAAGAAACCCCGAAAAAAGTAAGTGCTGGACAATCAGGAAGAATAACGGAGAAAGTAGGGGAGACACCGAAAAAAGCCACGCCTAAGCAAAATGGAAGAATAACAGAGAAATTCAATTTCTCGGCAGAAACTCCGAAAAAGGGTAGACAAAACGGAGCAGTAGCAGAATTCGTTTCCACTCCCCGTAATAAGAAAGCGCCGACTATTGGTGAAAGTTCTGGGTTAAGTAGCAAAACTGGCAAGGAGAAAAAACCATTTGTCGAGATACACATGGGTTCTGATGAGATGGTGGCCTTATTGCATACAAAAATTAAAATCGAACCAGAAGATGAATGTATCAATCCTACGCCACAGAATGGATCCTACAACCTTAGACGCGTGACAAGAAATAGTCTTGATCGACCGCTGAGTGACGTGAATACACGGCTTCGTGTTCATAGAAAACGTAATACTAAAGGGCAGTTCCTTGCCCTGCCTAATGAGACATCGAAGGCTCGGTCGAAGGAGCAGCTGCTGAGGGCCAAGTTCAAATGTAAAGACTGCAAAGTTAATCTAGTTAAATGCGACATGGTTGTCAAAACAGAAATTGTCGATTATGTCCCGTCGACTCCGGTAAACGTAGATGATGATATCGAGGAGGTTTGGAGAAAGAAGGTTAACTTAAAGAGAATCCACGTTCCATTGGTTAGACTGAATAATCTGATAAAAGTAGAAGTTAACGATACGTTTCAATCATCAAATCGAGAGAACAATCCAGAGAAGCCCAATGCATCTCAGCCTAATGTCAAAGCTAAATTGCGTAAGATATTCCGGTGTAAAGTCTGCTGGAAATACTTCTCCACGAAGGAGAAGTTATACGAGCATTTGAAAGTTACTCATGTGTTCTACATATCGAGCGTGTGCAGCGCTTGGTACAAATCCCGAGCCAGATTGCTGAGACACTATTTGCACCAGCACTGCGTTATGAAACGCATGGAGTGCTGCGTGTGCTTCGAGAAATTCGTGTCGCCTGTGTTGTTGAAGCGGCACATGGGTCTGCACTGCGTCAAGGTGTTGCAATCGAAGAGCGATAAGGTGTTCAACAAAGAGGCGGTCAGGTGTAATGTGAACTCCAGGACGAACTCGTGCGGGGCGTGCGGTAAGCAATTTTGGTTGGGGGCTTGCTTGAGCGAACATCAACAAGTGTGTCATAAGATAAAGGCGCAATTGCAGAAATCACAGAAAGCGCCGTGTCCCGTGAAAACGTCCCCAACGAAAAAAACGCTTGAGTCACCGTTGGCTGTTACAAGCGGTACAGTGACCGAGCAGCATCCCATCAAGTTATCCCCTGTCAAAAATCATCCTCGTGGAACTGAATCACTGTCGGTAGTACAGCCGAAAAGATTGCTGAAAGGCGTCGCGCTCGCGAAGGGGTACAACATCGACAATACCAGCACGAGCAAGGAGAAGTTCTCCTGCACTACTTGCAGTGCGCAGTTCCTGACTTTCCAGAATTTATGCTTGCACGAACGAACTTTCACTCAAGCCGCTAAGTACGTCTGTGGGTGCTGCAATACCGCCTTCACCACACAGAAATTATTGCAGAACCACGTCACAGCCACCCACATGCTCGATACTCTAAAGAAGTACAAGTACTTTTGTACGTTCTGCACACAGGGCTTCCTAAAGAAGATCAATCTTCAGACCCACACAGGACACTTCCACAATGGTCAAACGCCCATCATTCCCAAACCGTGGTTGGATACTACTTCCGACTGGGAGGTGAACACGGTGTGCAACGTTTGCAATCTGATATTCGAGTCCAGCGAACGGTTCATCGAGCACAACATGTACTACTACAAGGGACAGATGTTTACCTGCACGTTCTGCAACCAAACCTTCCGTGGAATGTACATGCTGAACCATCACAACAAGTTGGTGCACTACACGGAGGACATGGCGAAACAGTACCCGTACATGTGCAACATCTGCAACGAGGGTTTCACCCAGGACTCCCAGTATCACGCGCATAAATTGCACGTTCATTCGGCAGCGCCCGAAACCAGCACACAGTCTCTGCAAGATCACACTTACGCCATCACGGTTGGGATCGGAGGATTGACGAATGGACCGACGATGAAATACAACTGTGAGGTTTGCTACATGAACTTCATGGTCGAGGAGGACCTACGGCAGCACCAGTTGGAGTACTCCAATAATGGTGACTACCTATGCAGCTACTGCGCCAGAAGATGTCCTACGGACAGTATCCTCAGCAAGCACGAGAGTTTATCGCACACTTGTGGCAATTTCACCGACTGCTACAAGTGTCGCTACTGCGAGGAGGTGCTTTCCACGTGTACAGCGTTGAAATGCCACGAAATACACTTCCACCAAAAGATCTCTAATCCCCAGACGAGCAACGATAATCAGCCAATCGCGAATCAGAGTGCAAAATCACCTGGAAACGTTGGGGACCCATTCGTCTGCGCGATTTGCAGCATGAAGTTCGTAACCTTGGAGAAATTGAACCATCATATCTTAGAATATTCGAACGTTGGTATGTACAGTTGTCACATCTGCAGCCGGAGGTTCTCGGAGCTGTATCGCCTAGAAGTCCACAAGCTAAAGCACTCGAACTTGAACTTCATATTGTCTAAGCATCACTGCCCCATATGTCGTGAGGGATTCGCAAATCCAGTCAACGTTCACATGCACGTGATGCACTTCCACAAAAGCACAACGACCGATCAGTTGGTATCAAAGGATGCGCAGACCTTGCAGGCAGGCGACCTAAACGTCGAGTCGGCCTCAAACAGTCCGTCTAAGACCAAGTCGACAACGTGTCCTGACTGTTTGGTGTCGTACGATTCCGAGAGTGCTTTGAAAAGGCACCAAGCACGCTTCGCAAACGAAGGGCTACATGCCTGCGAGCACTGTGGCAGGAGGTTCCAAGCCGTGAAACTGCTGAAGGAACATTTGAGGAGGCATGCTGCAGGCATTGAACGCCTGAGGTACGCGTGTTCCGAATGCGACGATAGATTTGGTAATCCGGTGGCCAGATATCAGCATATCGTTCATCTACATGGGAAGAGTAAGTGGAAAGGCGACGTACCTAATGCCATAGCGGCTCGCCAGGATGCTGAAGTTGCTGCTAAAAAATTAGAGGGTGCGGATTTCGGTGTATCATTGCTTCGATCAGACACCTCAACGTATTACACTGGTGAACCTATTGGTACAGCCAGCCCGGTGGACGGATTAAGCGATGGTCAGGGGAGATCATCATCATCAACTGATCAGCTGATTTACGTTGGTGAACCTCGAGCGAACCCCACACTATCAAAAATTGAACCTATGCCTGCTGCCAGTCACGTGCACGGATTAAGCGATCCTCAGGGAAGATCCTCATCATCAACTGATCAGCAGGCGGATATGACTACAGCGGCAGCTAAGCAAGAGACACTTGAAAATTTAAAGGGGACGACTACGTGCTACGTCTGCCCCCTCTGCGACTCCAAGGTCCAAACGCTGGAAAAATTTACGTCACATTTGAAACTGGTACATGATGGGAAGATAATCCAGGGGACCATATGCGACAAGTCGCAGTCTTTGACTGGAGGCGTCATCGGCTGCTTGATCTGCGGAGTCATCTTCACCACGGAAGACGATCTCAAGATACACCTCAAGGAAGCGCATGTGAAGATTTGCCCTGCCAACATGGAAGACGCTGCCGATTCTGCGGAGAACACAGATGCCGTGGAAATCGTTTGGGAGAAGAAACTGAACGCTGCCAAGCTGAGTGAGGACCAGAGCGACTCGGAAGTCCATGTTCTGTGCTCAAGTTACCGCGCTCCGATCATGAACTATGACAAAACTGTTGCGAATACGGAATCAATGGATTTAAGTGTTGATGATACATTTCTCAAGATCAAAGATTTTGCCAAATTGGTGTAA
Protein Sequence: MARVYVYERPVDAVLADVSFYEKHHLVTGVRVKQEPRDTDDKSQDSTLPFANINVKSATSAQTTVQGTQLVDVVNNKENELVSSTNRAGKGKSDTDEVNTKKRKRLTFKNLKKPKTLSEQVWRQHKRACRSSLERKPPEPVGKELEITDVECDVCYLKFRTERALKCHREYYHEIVDRICDKCQTVFRSIDGLKDHKLLGTCKVQSQTKWKSENVCCFCNRKFSTKPYLQGHVFHTHTELLQNITSDASETDENNETDTTKETDKISEPPLTERTNGHVEHPFVQKKEKSPADSPTKRMRQTTMIEFLSGFKRKEYGSPKKVDPTKETPKKVSAGQSGRITEKVGETPKKATPKQNGRITEKFNFSAETPKKGRQNGAVAEFVSTPRNKKAPTIGESSGLSSKTGKEKKPFVEIHMGSDEMVALLHTKIKIEPEDECINPTPQNGSYNLRRVTRNSLDRPLSDVNTRLRVHRKRNTKGQFLALPNETSKARSKEQLLRAKFKCKDCKVNLVKCDMVVKTEIVDYVPSTPVNVDDDIEEVWRKKVNLKRIHVPLVRLNNLIKVEVNDTFQSSNRENNPEKPNASQPNVKAKLRKIFRCKVCWKYFSTKEKLYEHLKVTHVFYISSVCSAWYKSRARLLRHYLHQHCVMKRMECCVCFEKFVSPVLLKRHMGLHCVKVLQSKSDKVFNKEAVRCNVNSRTNSCGACGKQFWLGACLSEHQQVCHKIKAQLQKSQKAPCPVKTSPTKKTLESPLAVTSGTVTEQHPIKLSPVKNHPRGTESLSVVQPKRLLKGVALAKGYNIDNTSTSKEKFSCTTCSAQFLTFQNLCLHERTFTQAAKYVCGCCNTAFTTQKLLQNHVTATHMLDTLKKYKYFCTFCTQGFLKKINLQTHTGHFHNGQTPIIPKPWLDTTSDWEVNTVCNVCNLIFESSERFIEHNMYYYKGQMFTCTFCNQTFRGMYMLNHHNKLVHYTEDMAKQYPYMCNICNEGFTQDSQYHAHKLHVHSAAPETSTQSLQDHTYAITVGIGGLTNGPTMKYNCEVCYMNFMVEEDLRQHQLEYSNNGDYLCSYCARRCPTDSILSKHESLSHTCGNFTDCYKCRYCEEVLSTCTALKCHEIHFHQKISNPQTSNDNQPIANQSAKSPGNVGDPFVCAICSMKFVTLEKLNHHILEYSNVGMYSCHICSRRFSELYRLEVHKLKHSNLNFILSKHHCPICREGFANPVNVHMHVMHFHKSTTTDQLVSKDAQTLQAGDLNVESASNSPSKTKSTTCPDCLVSYDSESALKRHQARFANEGLHACEHCGRRFQAVKLLKEHLRRHAAGIERLRYACSECDDRFGNPVARYQHIVHLHGKSKWKGDVPNAIAARQDAEVAAKKLEGADFGVSLLRSDTSTYYTGEPIGTASPVDGLSDGQGRSSSSTDQLIYVGEPRANPTLSKIEPMPAASHVHGLSDPQGRSSSSTDQQADMTTAAAKQETLENLKGTTTCYVCPLCDSKVQTLEKFTSHLKLVHDGKIIQGTICDKSQSLTGGVIGCLICGVIFTTEDDLKIHLKEAHVKICPANMEDAADSAENTDAVEIVWEKKLNAAKLSEDQSDSEVHVLCSSYRAPIMNYDKTVANTESMDLSVDDTFLKIKDFAKLV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00865572;
90% Identity: iTF_00861491;
80% Identity: -