Lwla013610.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Lacanobia wlatinum
Gene Symbol
PAXBP1
Assembly
GCA_947578705.1
Location
OX388027.1:25530935-25543834[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.4e-13 1e-09 39.1 0.1 6 190 519 683 514 691 0.70

Sequence Information

Coding Sequence
ATGTCGTTGTTTCGAAAGCCGAAGAAGATACAGCGTCGTGTGTTTTGTGCTGATGATGACGAAGATGGAGAGCCAGAGGCTCCGCCGCCGCCAGTTATCAGCCAAGAGAGGGAACCCAAGTCTTCCAAGAAAACTGCTCTGTTGAGTTTCGCCGACGAAGAAGAGGAAGATGAAGAAGTGTTCAAAGTCAAGAAATCTTCTCAAAGTAAGAGATTAGCCAAGAAGCGTGAGAAAGAGAAGCAGAAACGCGATGTGAGAACAGACGGTGATAATAACAAATATGACACTATTGTCATTGAGGAAAAGAACAACCACAATGAGCTCAACAACGACAAGCCCAGGCCAAAGAAGAAGGTTTCGCTAGAGGGGTTGATTCTGTCCGGGCGGGAGGCGCTGGCGGCCGACGGGGCGGGCGACGTGTCCGACGAGAGCGCCCCGGACGAGGAAGCCGACGAGGACGACAGGGGGTTCCACCGGTACCGCGCCGAGTCCGTGAGGGCCGCCATAATGGGCGCCCCGGGCCGCATACCCGACGCCGCGCTCATCCACGCCGCCCGCAAGACCAGACAGCAGGCTCGCGAGTTGGGCGGCGGCGCAGACTACATTCCCGTGAAGTCCGAGTCCGCCCCGGGATCCCGGCTGGTGCGGGACGACGGCTCAGGGGACGATGAGGAGGAGGGGCGGATAATCGTCCGGGGACTGGACTTACCTAGTGATAAGCCTAAACGAGGCACAGCAGCAGTATCCGAGGAAGAGCTGGACAGCGAGTCGGAGGAGTGGGTGGAGCAGCAGCTTCAGAAGGCGCGGCCCGTCCTCGCGGAACTGACTGGTGAAGCCGCGATAGAAGTGAACCCGTTCTCGGTAGCGCTACCGGCGCCTCAGCTGTCAGCCCCGGAGCACCTGCGGCCCCTGTCGACCGGCTCGCAGGCACCTTCCACGGCCAACGAGCTGGTGGAGGCGCTAAGGAAGCGGTTAGGAGAGCTCCAAGTGGAGCGCTCGACGACGTCAGACACGCAGAAGGAGCTCCGCGACAGGTTGCTGACCGCCGCCAGGATACGAGAGAGCCGCGCGGCCCGCTGCGGAGAGTTAGACGCGGCGTACAGGAGGGCGCAGGCCATACGCGGCTACCTCACCGACCTCATCGAGTGCCTTGATGAGAAGATGCCACAACTGGAGGCGTTGGAAGCTCGCGCGCTGGCGCTACACAAGCGTCGCTGCGAGTTCCTCGTAGAGCGTCGGCGGGCCGACCTGAGGGACCAGGCGCAAGACGTGCTCGCTCCACCTGGTCGAGCCTCAAAGCCAGCCGACAGCGAAGAGAAGACGCGGCGCGCCGCTGAGCGTGAGGGGCGGCGGCGAGCGAGGCGCCTCAAGCGCGAGGCCGTCGCCCAGGCCGCCGGCGCCGCGCTGCCGCACCGCGACGGAGACTCCTCGGACGACGAGCTGCCTCCGCACGAGATGCACCACTACACGCAGGAGAGAGACGCCATCCGTCAACAATCCGCGTCGTTGTTCAGCGACGCGCTGCCCGCGTGGCGCAGCGTGTCAGGAGTATGCGGGCGCCTCGCACGCTGGCGAGCGCGCGCCACGTCTCTGTATACGGACGCCTACGTGGCCGACTGCCTGCCCAAGCTGCTGGCGCCCTACGTCAGGCACGAGCTCATATTATGGAACCCACTAGCAGATGAAGACAACGAAGACTACGAGAGAATGGATTGGTACAAATGCCTGATGATGTACGGCGTGCGTACGGAGCGCTCCGCAGACGACTCCTCTGAGTCCGGGTCGGAGGGCGAGCCCGAGCCGCCGCCTGTCACCACCAGTAGCGTGCGCGAGGATCCGGACCTGCTGCTGGTGCCCAGCATCATCAGCAGGGTGGTGCTGCCTTGTCTCACAGAGCTGGTGTCGGTGGCGTGGGACCCGCTGAGCGTGCGCGCGTGCACGCGCCTGCGCTCGCTGCTGCTGCGCGCGGCGGCGCTGCCCGCGTGCGCGCCCGCACTGCGGCGCCTGGCGACCGCGCTGCGCAGCAGGCTGGCGGCCGCGCTCGCCGCCGACGTGTTCCTGCCGGCCTTGCCGCCACAGtttGTCTGTTGA
Protein Sequence
MSLFRKPKKIQRRVFCADDDEDGEPEAPPPPVISQEREPKSSKKTALLSFADEEEEDEEVFKVKKSSQSKRLAKKREKEKQKRDVRTDGDNNKYDTIVIEEKNNHNELNNDKPRPKKKVSLEGLILSGREALAADGAGDVSDESAPDEEADEDDRGFHRYRAESVRAAIMGAPGRIPDAALIHAARKTRQQARELGGGADYIPVKSESAPGSRLVRDDGSGDDEEEGRIIVRGLDLPSDKPKRGTAAVSEEELDSESEEWVEQQLQKARPVLAELTGEAAIEVNPFSVALPAPQLSAPEHLRPLSTGSQAPSTANELVEALRKRLGELQVERSTTSDTQKELRDRLLTAARIRESRAARCGELDAAYRRAQAIRGYLTDLIECLDEKMPQLEALEARALALHKRRCEFLVERRRADLRDQAQDVLAPPGRASKPADSEEKTRRAAEREGRRRARRLKREAVAQAAGAALPHRDGDSSDDELPPHEMHHYTQERDAIRQQSASLFSDALPAWRSVSGVCGRLARWRARATSLYTDAYVADCLPKLLAPYVRHELILWNPLADEDNEDYERMDWYKCLMMYGVRTERSADDSSESGSEGEPEPPPVTTSSVREDPDLLLVPSIISRVVLPCLTELVSVAWDPLSVRACTRLRSLLLRAAALPACAPALRRLATALRSRLAAALAADVFLPALPPQFVC