Amun011121.1
Basic Information
- Insect
- Anorthoa munda
- Gene Symbol
- PAXBP1
- Assembly
- GCA_945859655.1
- Location
- CAMAOM010000169.1:1-19351[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2 2.4e+04 -4.3 0.0 216 237 325 346 319 351 0.72 2 2 1.3e-10 2.7e-06 28.4 0.3 3 64 529 591 527 613 0.73
Sequence Information
- Coding Sequence
- ATGTCGTTGTTTCGAAAGCCGAAGAAGATTCAGCGTCGGGTTTTTTGTGCTGATGATGATGATGAAGGAGAACCCGAGGCTCCGCCGCCGCCAATTATTAGCCAGGAGAAGGAGAGAAAGGAGAAGGAATCCAAGGAACCCAAGTCTTCTAAGAAAACTGCTCTGTTGAGTTTCGCCGACGAAGATGAAGAAGATGTAGAAGTGTTCAAAGTCAAGAAGTCTTCTCAAAGTAAGAGATTAGCCAAGAAGCGAGAGAAGGAGAAACAGAAGCGTGATGTGAGAACCGATGGTGATAATAACAAAAATGAAACTATTGTTATTGAGGAAAAGAACAACCACACTGAACCTGCCGACGAAAAACCCAAGCAACCCAAGAAGAAGGCAACACTAGAGGGGCTGATTCTGTCCGGACGGGAGGCGTTAGCGGCCGACGGAGCAGGGGACGTCTCTGATGAGAGTGCTCATGAGGATGAAGCTGACGAGGACGACAGGGGGTTCCACCGGTACCGCGCCGAGTCCGTGAGGGCCGCTATCATGGGCGCCCCGGGCCGCATTCCCGACGCCGCGCTCATACACGCAGCCCGCAAGACCAGACAGCAGGCTCGCGAGTTGGGCGGAGGCAGCAGCGCAGACTATATTCCCGTGAAATCGGAGTCAACCCCCGGATCCCGGCTAGTGCGGGATGACGGCTCTGGGGACGATGAGGAGGAAGGCAGAATACTTGTCCGGGGTCTGGAACTGCCCAGTGATAAGCCTAAACGTGGAACTGTGGCAGCAGCAGTGTCCGAAGAAGAGGACAGCGAGTCGGAGGAGTGGGCGGCACAACAGCTGCAGAAGGCGCGGCCTGTCCTCGTGGATCTGACTGGAGAAGCAGCGACAGAAGTGAACCCGTTCTCGGTGGCCCTGCCTGCTCCTCAGATGTCCGCACCGGAACACCTGCGCCCTCTCACGACTGGCACCACGCAGCCCCCTTCGACTGCCAATGAGCTGGTGGAGGCCCTAAGGAAACGGCTAGGAGAGCTCCAAGTAGAACATGAGACTACATCAGAAACACGCTCGGATCTCCGCTCCCGGCTGCTGACGGCGGCCAGGATCCGGGAGAGCCGCGCGGCGCGCTGTGCGGAGCTGGACGCCGCCTACAGGCGCGCGCAGGCCATACGCGGCTACCTTACTGACCTCATCGAGTGCCTGGATGAGAAGATGCCACAACTGGAGGCGTTAGAAGCCCGCGCGCTGGCGCTACACAAGCGTCGCTGTGAGTTCCTCGTGGAGAGACGCCGAGCCGACCTGCGGGACCAGGCGCAAGACGTACTCGCACCACCTGGTCGGGCCTCGAAGCCAACTGACAATGAAGAGAAGACACGTCGTGCAGCCGAGCGCGAAGGGCGGCGGCGCGCTAGACGTCTGAAGCGGGAGGCGGTGGCCGCGGCACACGGGGCTACACTGCCGCATCAAGACGGAGACTCCTCGGATGATGAGCTGCCTCCGCCTGAGATGCACCACTATACGCAGGAGAGAGATGCCATCCGCCAACAATCAGCAACGTTATTCAGCGACGCCCTCCCCGCGTGGCGCAGCGTGTCAGGTGTATGCGAACGCTTAGCACGCTGGCGGGCGCGCGCCGCGCAGCTCTATACCGACGCCTATGTGGCCGACTGCCTACCCAAGCTGCTGGCGCCTTACGTCAGGCACGAGCTAATTCTATGGAACCCGTTAGCAGAAGAAGATAATGAGGACTATGAAAGAATGGAGTGGTACAAATGTCTGATGATGTACGGCGTCCGTACCGAGCGCTCGGCAAACGACTCGTCGTCATCCATGTCGGAGGACGAGGCTGAGCCCGCGCCGTTGTCCACCAGCACAGTGCGGGATGACCCGGATCTGCTGCTGGTGCCCAGCATGATCAGTCGGGTGGTGCTGCCTTGTCTCACAG
- Protein Sequence
- MSLFRKPKKIQRRVFCADDDDEGEPEAPPPPIISQEKERKEKESKEPKSSKKTALLSFADEDEEDVEVFKVKKSSQSKRLAKKREKEKQKRDVRTDGDNNKNETIVIEEKNNHTEPADEKPKQPKKKATLEGLILSGREALAADGAGDVSDESAHEDEADEDDRGFHRYRAESVRAAIMGAPGRIPDAALIHAARKTRQQARELGGGSSADYIPVKSESTPGSRLVRDDGSGDDEEEGRILVRGLELPSDKPKRGTVAAAVSEEEDSESEEWAAQQLQKARPVLVDLTGEAATEVNPFSVALPAPQMSAPEHLRPLTTGTTQPPSTANELVEALRKRLGELQVEHETTSETRSDLRSRLLTAARIRESRAARCAELDAAYRRAQAIRGYLTDLIECLDEKMPQLEALEARALALHKRRCEFLVERRRADLRDQAQDVLAPPGRASKPTDNEEKTRRAAEREGRRRARRLKREAVAAAHGATLPHQDGDSSDDELPPPEMHHYTQERDAIRQQSATLFSDALPAWRSVSGVCERLARWRARAAQLYTDAYVADCLPKLLAPYVRHELILWNPLAEEDNEDYERMEWYKCLMMYGVRTERSANDSSSSMSEDEAEPAPLSTSTVRDDPDLLLVPSMISRVVLPCLT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00851821;
- 90% Identity
- iTF_01117231;
- 80% Identity
- -