Basic Information

Insect: Ithomia salapia
Gene Symbol: RREB1
Assembly: GCA_028829205.1
Location: JAPOND010000230.1:1718774-1729078[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 3 2.6e+02 3.1 1.4 1 23 94 117 94 117 0.94

2 12 2.8 2.4e+02 3.2 0.2 2 12 149 159 148 169 0.80

3 12 0.021 1.8 9.9 0.1 1 23 295 317 295 317 0.97

4 12 0.0011 0.096 13.9 0.4 1 23 326 348 326 348 0.99

5 12 0.00069 0.059 14.5 2.0 1 23 354 377 354 377 0.97

6 12 0.0028 0.24 12.6 1.6 1 23 726 749 726 749 0.96

7 12 0.00023 0.02 16.0 1.3 2 23 940 961 939 961 0.97

8 12 0.024 2 9.7 5.3 1 23 967 990 967 990 0.97

9 12 0.2 17 6.8 1.4 1 23 1021 1045 1021 1045 0.90

10 12 1.6 1.4e+02 3.9 0.2 1 23 1068 1091 1068 1091 0.84

11 12 0.0017 0.15 13.3 0.2 2 23 1131 1152 1130 1152 0.96

12 12 0.026 2.3 9.5 5.3 1 23 1158 1180 1158 1180 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	3	2.6e+02	3.1	1.4	1	23	94	117	94	117	0.94
2	12	2.8	2.4e+02	3.2	0.2	2	12	149	159	148	169	0.80
3	12	0.021	1.8	9.9	0.1	1	23	295	317	295	317	0.97
4	12	0.0011	0.096	13.9	0.4	1	23	326	348	326	348	0.99
5	12	0.00069	0.059	14.5	2.0	1	23	354	377	354	377	0.97
6	12	0.0028	0.24	12.6	1.6	1	23	726	749	726	749	0.96
7	12	0.00023	0.02	16.0	1.3	2	23	940	961	939	961	0.97
8	12	0.024	2	9.7	5.3	1	23	967	990	967	990	0.97
9	12	0.2	17	6.8	1.4	1	23	1021	1045	1021	1045	0.90
10	12	1.6	1.4e+02	3.9	0.2	1	23	1068	1091	1068	1091	0.84
11	12	0.0017	0.15	13.3	0.2	2	23	1131	1152	1130	1152	0.96
12	12	0.026	2.3	9.5	5.3	1	23	1158	1180	1158	1180	0.97

Sequence Information

Coding Sequence: ATGCAGGGAGCCGCTACAGCGCCCGCGCCTCCCGCGGCAGAGCCTCCCGCCTCACAACAAATCAAAACAGAAGTATTCAGCGAGGCCAAAGTTGAAAGTGAGAATCAAGTGGGCGAAGTCATGAAGATCGAGCACCACGAGTCGCGTGCCACGCGCACGACGAGCATAGACAGCGACAACCGCTCAGACAGAAGCGAGGAAGAGGACTGCAGAAGAGCACGGAAGAGAATGGCGTCTTCATCACCGTCTCCTATACCCTTGGATAAAAGAATTGCTAGATTCGAGTGCCGGAAATGCTtacagcgtttcgattcgataaATTCCTTCGATCTCCATCGATTTACAGCTCACGGAGACGACAACAGGACTGGATTCGACGATTATATAGATTATTCAAGCAAGAAGTTTCAGGGTATGATACAACATCATATACCAGATGGATTGCGCTGCGAGCACTGCTCTAGGGAATTCCCAACTGGACAAATCTTAGATATTCATAGAAAAACGTGTACCGCATCTACAAGAATATCTAGCCCAGATCGCGATCGCAAAGAATTTTTTGCTAAGCTTGATCTAAGGAATAGGACCTTTGGTATTCCTGGAACATTAACACCACCAATGGATCGCTTTACACCCAAGTTTGATGACACCCATCTCTCTAATGGCATCAGACATATAGATGCAGCAAGAGACCTTGCTGATATTCAATCCATATTAAATGTTACATCTGCTGGGAGCCTTTTAGAAAGACTCACTGGAACCAGAGTAGCTTTAGAGAGTTCAGTGCTTACGCCTCCCGATACTATCATAAAGGAGCGTGAGCAAGAGGAAACACAGGATAATTTTGCTGCAGAATTTAGAAGAATGAAGCTTCGTGGGGAATTTCCTTGCCGACTATGTCCCGCAAAATTTCCTAACCTTAGAGCTTTAAAAGGCCATAATCGAGTACATCTAAGTGGGACTGGACCAGGCCCCTATCAGTGCAATATGTGTCCACATGCATCCTTGGACAAAGCAGCTCTTGTCAGACATATGCGCACACACAATGGAGACAGACCATATGAATGCGCCGTGTGTAACTACGCATTCACTACAAAAGCTAATTGTGAGCGCCATTTGCGAAATCGACATGCTAAGGTTACGAGAGAAGACGTCAAACGCTCTATTATATATCATCCCTCTGAAGACCCTAACAATGATGAAGTTAATTCTAAGCTTGCCCGTGAGGAGGTCAAAAGATCGCTGGCCTTCCATACCCCCGAAATTGATAGACGTAGTGAATCATCAGATCGCAATACCCCATTAACCCATTACAACAACACTTTTATTACCGACAGACACCCAGTCACTTCTTTAACAAAGGCTCTGCCTGATATACCTACTTTAACTCCAAGAGAATCTGAGCAACCTATGCCAAGAATAAAAGTCAAAGGTATCGGGCAACTGACCCAAATACCAGAATTTAGGTCTCCTGATCTTACATTTAAAGCACACGACATCCAGTCAGAACCGTACAGTGAAGAAGCACCAGTAGACCTTAGCACAAGTGATAACAATAGCTGCGACGTTCTTGATCTAAGTAAGAAAAAACGCGATACAGATGACGATGAACCGAAACTACCACCACGTTCCGCTTTCGATGATTCGGCGTCTGCTGCCGCCACGGCCGCTGCAACTGCTTTTGAAAAGACAAGGTTGCTTTTAAATCAACAAAGACTTTTCGAATCATCCCCACCAAAAATCGATCCTGCTTTCTATACAACTCAACTTTCTCAACTCTACGCTAGTACTTTAACAGGCTTGTCTGGGCTACCCGTCCCACCGTCGTTTCCCATAAATCCGTATTTTCTACAATCATCTTTTTTTCCCCATCCAACCGATTCCCAAGAAATAACTGAAATTAAGCAGCGTATTCATAAGGAAATATTTCGAGGCCTAAGTATGTCCGGGGGAAGACTGGTTGATGATACTGAAACACAGCTAAAGCAAGAGCCAGAAGAAGAAGAACTTAAACCTATCCCAGTAGCTTCTACACCTACCCCTCCCCCACATGCCGAATCTCCTCGTCCGTTAAGCAACCCATTGGTTTCACAAAATGATTCCGTcaaaatggtaataaaaaatgGTATTCTTATGCCAAAGCAAAAGCAAAGACGATACCGCACTGAAAGGCCCTTTTCCTGCTCTCAGTGTTCCGCAAGATTCACCCTGCGCTCAAATATGGAGCGTCATGTCAAACAACAGCATCCTCAACACTGGAGTGTTAGACGTCCATCTCCAAGAGCTCCTCCACCATATCCAAGTACGGACACTCTAGCCGACCGTGTCAAATATGCTTTACTGGCTCGTCACTTAGAAAGACCCCTGCAAGTTGATGGTTCTCCTGTCCGTAGAGACTCTGATGAAGTAGCCGATAATGAAGAGGATGAAGATGACACTTTAGTTATAGATGAAGAACCGGAAGACCAGAAACCAGAAGATCATACGGCCGCTCGTAAAGCAGCGGCCGAAATCCTTATGGCGACACGTCAACAAGAAATGCATAAGGATTTTGATCTCAAAATTGCTGGTAATCTTATTAACAAACCACTTCCCATTGTAACTGAGAAGACAGAAACGGAAACCGATGCTCTACCAAATCAAAATGCTATAACAATAGTTCCAACTCGCAGCGATGAAGAAGAGGATGAGGAAGGTCTCGTCGCATCCACGAGTGAGGGAAATAACTCCGGAAGTGATGAGAATAAGTCCGAATCCGATACTGGAACGCAACCACCAAAAAAGAAGTCCGCTTACAGTTTAGCACCAAACCGCGTATCCTGTCCGTACTGCCACCGTAAATTCCCCTGGTCTTCATCTCTTAGACGCCATGTCCTTACTCACACCGGCCAAAAACCTTTCAAGTGCCCCCACTGCCCCCTTCTCTTCACTACTAAATCCAACTGCGATCGCCACTTACTTAGAAAGCACGGAGGGTCAGCCAAAGCAATACTTGCTGAACCAATTCAGGATACCGTAACTCCTCAAAACAACGACAGCAGATCTGTACCAGAGAGACCATTCAAATGTGCTTCTTGTCCAACAAGCACGTTTTCATCTATGGAAACCTTAAAGAAACACATGTCCTCCCGCCATGGAACTGGTGAATCCCAGCCAAGTTCCCCAAACCCGGAGGCGGAGGAAGGAGATGgaagtttagtttttaaatgtcATCTCTGTGAGGGGTCATTTGGGGACAGGACTGGAGCCCTAGGGCACCTAGCATCGGCTCACGCTTCGGAGTACGAACAGTTAGTCAGCAAAGGAGCTCTAGACGCGGTTAGCGATCGCAGTGAAAGTGCAGATGACGACGAGAGAGGAAAATTCCCGGATCATGCAAATAGAAAGGTCGTCTGTGCGTTCTGCGTGCGTCGTTTTTGGTCGGCTGAAGATCTCCGGCGTCATATGCGTACCCACTCCGGCGAGCGGCCCTTCGCCTGTGATCTATGTCGGCGCCGCTTCACGCTGAAGCACAGCATGCTGCGGCACCGGAAGAAGCACCGCGAGGACAGCGACGATGAAGACTCACCCAGGGATAATGAATACCGCTACCAAGACGACGAAGGCTCCGGCAACGAAATACCGACCAACGTCAACAACAACAACTCCCCGCCCGCAGTCTACGACAAAAAGTCGAAACTAGAACTAACTTCACGCAAAAATTCCTCTGAAATTGAAAATGACACAGAAAACGGTGGCGATCTAATTGGGAAACTACTCGGCATACGTGACAAGACTATCATTAACAAGCTGCTGTCGTCCGCAGACGAGGCTGCCAAGTTCCTTGGTGTCAATAAATGA
Protein Sequence: MQGAATAPAPPAAEPPASQQIKTEVFSEAKVESENQVGEVMKIEHHESRATRTTSIDSDNRSDRSEEEDCRRARKRMASSSPSPIPLDKRIARFECRKCLQRFDSINSFDLHRFTAHGDDNRTGFDDYIDYSSKKFQGMIQHHIPDGLRCEHCSREFPTGQILDIHRKTCTASTRISSPDRDRKEFFAKLDLRNRTFGIPGTLTPPMDRFTPKFDDTHLSNGIRHIDAARDLADIQSILNVTSAGSLLERLTGTRVALESSVLTPPDTIIKEREQEETQDNFAAEFRRMKLRGEFPCRLCPAKFPNLRALKGHNRVHLSGTGPGPYQCNMCPHASLDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKVTREDVKRSIIYHPSEDPNNDEVNSKLAREEVKRSLAFHTPEIDRRSESSDRNTPLTHYNNTFITDRHPVTSLTKALPDIPTLTPRESEQPMPRIKVKGIGQLTQIPEFRSPDLTFKAHDIQSEPYSEEAPVDLSTSDNNSCDVLDLSKKKRDTDDDEPKLPPRSAFDDSASAAATAAATAFEKTRLLLNQQRLFESSPPKIDPAFYTTQLSQLYASTLTGLSGLPVPPSFPINPYFLQSSFFPHPTDSQEITEIKQRIHKEIFRGLSMSGGRLVDDTETQLKQEPEEEELKPIPVASTPTPPPHAESPRPLSNPLVSQNDSVKMVIKNGILMPKQKQRRYRTERPFSCSQCSARFTLRSNMERHVKQQHPQHWSVRRPSPRAPPPYPSTDTLADRVKYALLARHLERPLQVDGSPVRRDSDEVADNEEDEDDTLVIDEEPEDQKPEDHTAARKAAAEILMATRQQEMHKDFDLKIAGNLINKPLPIVTEKTETETDALPNQNAITIVPTRSDEEEDEEGLVASTSEGNNSGSDENKSESDTGTQPPKKKSAYSLAPNRVSCPYCHRKFPWSSSLRRHVLTHTGQKPFKCPHCPLLFTTKSNCDRHLLRKHGGSAKAILAEPIQDTVTPQNNDSRSVPERPFKCASCPTSTFSSMETLKKHMSSRHGTGESQPSSPNPEAEEGDGSLVFKCHLCEGSFGDRTGALGHLASAHASEYEQLVSKGALDAVSDRSESADDDERGKFPDHANRKVVCAFCVRRFWSAEDLRRHMRTHSGERPFACDLCRRRFTLKHSMLRHRKKHREDSDDEDSPRDNEYRYQDDEGSGNEIPTNVNNNNSPPAVYDKKSKLELTSRKNSSEIENDTENGGDLIGKLLGIRDKTIINKLLSSADEAAKFLGVNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00986645;
90% Identity: iTF_01034090; iTF_01035006; iTF_00461889; iTF_00421676; iTF_00419302; iTF_00420840; iTF_00419310; iTF_00420032; iTF_00960470; iTF_00959719;
80% Identity: -