Basic Information

Insect: Danaus eresimus
Gene Symbol: RREB1
Assembly: GCA_018231745.1
Location: DVQP01002199.1:4467-8618[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 3.5 2.9e+02 2.9 0.9 1 23 82 105 82 105 0.93

2 12 2.9 2.4e+02 3.2 0.2 2 12 137 147 136 157 0.80

3 12 0.021 1.8 9.9 0.1 1 23 283 305 283 305 0.97

4 12 0.0011 0.095 13.9 0.4 1 23 314 336 314 336 0.99

5 12 0.00071 0.059 14.5 2.0 1 23 342 365 342 365 0.97

6 12 0.0029 0.24 12.6 1.6 1 23 715 738 715 738 0.96

7 12 0.00024 0.02 16.0 1.3 2 23 929 950 928 950 0.97

8 12 0.024 2 9.7 5.3 1 23 956 979 956 979 0.97

9 12 0.21 17 6.8 1.4 1 23 1010 1034 1010 1034 0.90

10 12 0.026 2.1 9.6 0.2 1 23 1057 1080 1057 1080 0.95

11 12 0.0018 0.15 13.3 0.2 2 23 1120 1141 1119 1141 0.96

12 12 0.027 2.2 9.6 5.3 1 23 1147 1169 1147 1169 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	3.5	2.9e+02	2.9	0.9	1	23	82	105	82	105	0.93
2	12	2.9	2.4e+02	3.2	0.2	2	12	137	147	136	157	0.80
3	12	0.021	1.8	9.9	0.1	1	23	283	305	283	305	0.97
4	12	0.0011	0.095	13.9	0.4	1	23	314	336	314	336	0.99
5	12	0.00071	0.059	14.5	2.0	1	23	342	365	342	365	0.97
6	12	0.0029	0.24	12.6	1.6	1	23	715	738	715	738	0.96
7	12	0.00024	0.02	16.0	1.3	2	23	929	950	928	950	0.97
8	12	0.024	2	9.7	5.3	1	23	956	979	956	979	0.97
9	12	0.21	17	6.8	1.4	1	23	1010	1034	1010	1034	0.90
10	12	0.026	2.1	9.6	0.2	1	23	1057	1080	1057	1080	0.95
11	12	0.0018	0.15	13.3	0.2	2	23	1120	1141	1119	1141	0.96
12	12	0.027	2.2	9.6	5.3	1	23	1147	1169	1147	1169	0.97

Sequence Information

Coding Sequence: ATGTGCGTCGCTTTGACTCGTTCCTTTGTTTTTACAGAAATCAAAACAGAAGTCATCGTCGAGGCCAAAGTTGAAACTGGGGAAGAAATGAAGATAGAACAGGAATCGCGCGCCACGCGCACCACCAGCATAGACAGCGACAACAGGAGCGATAGGAGCGAAGAAGATGACTGCAGGAGAGCGCGGAAGAGGATGGCTTCATCCTCACCGTCACCCATACCCTTAGACAAAAGAACAGCTCGCTTCGAGTGCCGGAAATGCCTGCAGCGTTTCGACTCCATTAACGCTTTCGATCTTCACCGATTTACAGCTCACGGAGACGACAACAGATCAGGATTCGACGATTATATAGATTACTCCAGCAAAAAGTTCCAAGATATCATACACCCTCACATAACAGAGGGGCTGCGTTGTGATCACTGCTCCCGAGAGTTCCCCACGGGCCAAATCTTGGATATTCACAGGAAGACTTGTGGCGGATCGACAAGAATGTCCAGTCCCGACCGGGATCGCAGAGAGTTCTTCGCTAAGCTGGATTTAAGGAACAGGTCCTTCGGGATACCCGGGACGTTAACCCCACCTATGGATCGATTCACACCAAAGTTTGACGAAACCCACCTCGCTAACGGAATTAGACCTATCGATGCCGCAAGAGACTTGGCCGATATTCAATCAATATTGAATGTCACATCTGCTGGAAGTCTCCTAGAAAGACTTACGGGAAGTCGTGTAGCTTTAGAAAGTTCAGTTCTTACACCTCCCGACACGGTCGTTAAGGAACGAGAACAAGAGGAGACTCAGGATAATTTCGCTGCCGAGTTCAGGAGAATGAAGCTCCGCGGAGAGTTCCCTTGTCGACTGTGTCCCGCAAAATTCCCAAATCTTAGAGCTTTAAAGGGACACAATCGGGTTCATCTCAGTGGAACCGGCCCAGGGCCATATCAATGTAATATGTGTCCGCATGCATCCTTGGACAAAGCAGCTCTCGTTAGGCATATGCGTACTCATAACGGAGACAGACCGTACGAGTGCGCTGTGTGCAACTACGCCTTCACAACAAAGGCTAACTGTGAACGCCATCTAAGAAACCGTCATGCAAAGATTACGAGAGAAGACGTGAAGCGGTCTATCATTTATCATCCATCTGAAGACCCTAACAACGATGAGGTCAATTCAAAGCTCGCTCGTGAGGAGGTCAAAAGGTCCTTGGCCTTCCACACGCCGGAGGTTGATAGACGCAATGAATCATCTGGACGGAACACTCCCCTGACTCACTTTAATCCCAGTTTCATCACCGACCGACACCCTGTCACTTCTCTGACTAAGTCTTTACCTGAAACACCCACTTTAACCCCAAGAGAATCTGAGCAGCCCATGCCAAGAATAAAGGTCAAAGGGATCGGCCAATTGACCCAAATACCTGAATTTAGGACTCCAGAGTTAACATTTAAACCAAACGACATACAGTCCGAAGCGTACAGCGAAGAAGCCCCAGTTGACCTTAGTACGAGTGACAACAACAACTGCGATGTGTTAGATCTTAGCAAGAAAAAACGCGATGTAGACGACGACGAAACAAAGACAACTCCTCGCTCTGCCTTCGATAATTCATCAGCATCCGCTGCCGCCACCGCCGCTGCATCTGCTTTCGAAAAGACAAGGCTTCTCCTAGCTCAGCAAAGGCTTTTCGAAACCTCTCTACCAAAAATCGATCCAGCTTATTACGCAACACAACTTTCTCAGCTCTACGCCAGTGCAGTACCAGGCTTGCCTGGTTTGCCGATACCGTCGTCATTCCCCATAAACCCATACTTTCTCCAAACTTCTTTTTTTCCCCACCCAACAGATTCCCAAGAAATAACTGAAATCAAGCAGCGTAttcacaaagaaatatttagagGTCTCAGTATGTCAGGAGGTAGATTAGTGGACGACACTGAAACTCAGCTCAAACAGGAGCCAGAGGAAGAGGAAGTTAAACCTATCCCAGTAGCCTCGACTCCGACACCCCCTCCCCATGCTGAATCTCCCCGTCCGATGAGTAACCCATTAGTAACGCAGAACGATTCCGTTAAGatggtaattaaaaatggCGTTCTTATGCCGAAACAAAAGCAAAGACGATACCGAACCGAAAGACCGTTCTCCTGCTCTCAGTGTTCCGCGCGGTTCACACTACGCTCTAATATGGAGCGGCACGTCAAACAACAGCATCCTCAACACTGGAGCGTCAGACGTCCTTCACCAAGGGCTCCCCCACCGTATCCTACAACAGACACTCTAGCCGATCGTGTGAAATATGCCTTACTCGCTCGTCACTTGGAGAGACCCTTGCAGGCAGATCGTTCTCCTGTCCGAAGAGATTCGGATGAAGTAGCAGATAACGAAGAGGACGAGGACGACACTTTGGTCATCGACGAGGAACCGGAAGACCGCAAGCCCGAGGAGCATACAGCCGCTCGAAGAGCTGCAGCTGAAATTCTCATGGCCTCATGCCAGCAAGAAATGCATAAGGATTTTGATCTCAAAATAGCTGGAAATCTTATTAACAAACCGGTCCCAATCACAACTGACAAGGTCGAAGCTAGCGCAGAACTAATACCAACTCAAGATGTCATACCAGTTGTTCCAACTCGCAGCGATGAAGAAGAAGACGAGGAAGGTCTTGTGGCATCCACCAGCGAGGGAAATAATTCGGGAAGCGATGAAAATAAATCTGAATCCGACACGGGAACGCAGCCACCAAAGAAGAAATCCGCGTACAGTCTAGCGCCCAACCGCGTCTCCTGTCCGTACTGCCACCGCAAGTTCCCCTGGTCCTCATCTCTCAGACGCCATGTTCTGACACACACAGGACAGAAACCTTTTAAATGTCCTCATTGCCCCCTTCTATTTACAACGAAATCCAACTGCGACCGTCACCTACTCAGGAAGCATGGAGGTTCAGCCAAAGCAATTCTCGCCGAGCCCATACCAGATACCATAACACCACAAAACAACGAAAGCAGGTCTGTACCTGAGAGGCCTTTTAAATGTGCGTCCTGTCCCACCAGCACGTTCTCCTCTATGGAGACGTTGAAGAAACATATGTCTTCTCGGCACGGAACGGCGGAGTCACAGCCGAATTCACCAAACCCTGAAGTGGAAGATGCTGATGGAAGCCTAGTTTTCAAGTGCCACCTCTGTGAAGCGTCGTTCGGGGACCGGTCTGGAGCCCTAACACACTTGGCATCAGTCCACGCCGCGGAGTACGAGCAGCTTGTGAGCAAGGGAGCTCTAGACGCCGTCAGCGATCGCAGTGAAAGCGCCGACGACGATGAGAAGGGGAAATTCCCAGACCACGCCAACAGAAAGGTCGTGTGTGCGTTCTGTGTTCGTCGGTTTTGGTCCGCGGAGGACCTGCGTCGGCACATGCGGACTCATTCTGGAGAGAGACCCTTCGCCTGCGACCTGTGCCGGAGACGGTTCACGCTCAAACACAGCATGCTGAGACACAGGAAGAAACACAGGGAGGACAGCGACGATGAAGACTCGCCCAGGGACAACGGATACCGCTACCAAGACGAAGAAGGATCTGGAAACGAGATCCCCAGCAACGTCAACAACAACAACTCCCCGCCGGCCGCGGACAAGAAACTCAAAATAGAAATGACATCGCGCAAATATTCCTCAGAGAACGAGAACGATGCGGAAAATGGCGGAGACCTCATCGGGAAACTACTCGGGATACCGGACAAGACCATCATCAACAAGCTGCTCTCGTCAGCGGATGAAGCCGCCAAATTCCTTGGCGTGAACAAATGA
Protein Sequence: MCVALTRSFVFTEIKTEVIVEAKVETGEEMKIEQESRATRTTSIDSDNRSDRSEEDDCRRARKRMASSSPSPIPLDKRTARFECRKCLQRFDSINAFDLHRFTAHGDDNRSGFDDYIDYSSKKFQDIIHPHITEGLRCDHCSREFPTGQILDIHRKTCGGSTRMSSPDRDRREFFAKLDLRNRSFGIPGTLTPPMDRFTPKFDETHLANGIRPIDAARDLADIQSILNVTSAGSLLERLTGSRVALESSVLTPPDTVVKEREQEETQDNFAAEFRRMKLRGEFPCRLCPAKFPNLRALKGHNRVHLSGTGPGPYQCNMCPHASLDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKITREDVKRSIIYHPSEDPNNDEVNSKLAREEVKRSLAFHTPEVDRRNESSGRNTPLTHFNPSFITDRHPVTSLTKSLPETPTLTPRESEQPMPRIKVKGIGQLTQIPEFRTPELTFKPNDIQSEAYSEEAPVDLSTSDNNNCDVLDLSKKKRDVDDDETKTTPRSAFDNSSASAAATAAASAFEKTRLLLAQQRLFETSLPKIDPAYYATQLSQLYASAVPGLPGLPIPSSFPINPYFLQTSFFPHPTDSQEITEIKQRIHKEIFRGLSMSGGRLVDDTETQLKQEPEEEEVKPIPVASTPTPPPHAESPRPMSNPLVTQNDSVKMVIKNGVLMPKQKQRRYRTERPFSCSQCSARFTLRSNMERHVKQQHPQHWSVRRPSPRAPPPYPTTDTLADRVKYALLARHLERPLQADRSPVRRDSDEVADNEEDEDDTLVIDEEPEDRKPEEHTAARRAAAEILMASCQQEMHKDFDLKIAGNLINKPVPITTDKVEASAELIPTQDVIPVVPTRSDEEEDEEGLVASTSEGNNSGSDENKSESDTGTQPPKKKSAYSLAPNRVSCPYCHRKFPWSSSLRRHVLTHTGQKPFKCPHCPLLFTTKSNCDRHLLRKHGGSAKAILAEPIPDTITPQNNESRSVPERPFKCASCPTSTFSSMETLKKHMSSRHGTAESQPNSPNPEVEDADGSLVFKCHLCEASFGDRSGALTHLASVHAAEYEQLVSKGALDAVSDRSESADDDEKGKFPDHANRKVVCAFCVRRFWSAEDLRRHMRTHSGERPFACDLCRRRFTLKHSMLRHRKKHREDSDDEDSPRDNGYRYQDEEGSGNEIPSNVNNNNSPPAADKKLKIEMTSRKYSSENENDAENGGDLIGKLLGIPDKTIINKLLSSADEAAKFLGVNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00986645;
90% Identity: iTF_00843043;
80% Identity: -