Basic Information

Insect: Hyposoter didymator
Gene Symbol: -
Assembly: None
Location: scaffold22:4402631-4410173[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 7.5e-05 0.0064 16.8 1.4 1 23 466 488 466 488 0.96

2 17 1.5e-05 0.0013 19.0 1.9 1 20 494 513 494 516 0.94

3 17 2.5e-05 0.0021 18.3 0.7 1 23 522 544 522 544 0.98

4 17 6.1e-05 0.0052 17.0 4.4 1 21 550 570 550 572 0.95

5 17 1.9e-05 0.0016 18.7 4.6 1 23 578 600 578 600 0.99

6 17 1.9e-05 0.0016 18.7 5.3 1 23 606 628 606 628 0.97

7 17 7.2e-06 0.00061 20.0 7.1 1 23 634 656 634 656 0.97

8 17 7e-08 6e-06 26.3 2.7 1 23 662 684 662 684 0.98

9 17 5.2e-05 0.0044 17.3 6.7 1 23 690 712 690 712 0.97

10 17 1.6e-05 0.0014 18.9 5.8 1 23 718 740 718 740 0.98

11 17 4.3e-07 3.6e-05 23.8 2.9 1 23 746 768 746 768 0.98

12 17 2e-05 0.0017 18.6 9.1 1 23 774 796 774 796 0.98

13 17 2.6e-05 0.0022 18.2 7.5 1 23 802 824 802 824 0.98

14 17 0.00049 0.042 14.2 8.9 1 21 830 850 830 852 0.94

15 17 9.6e-06 0.00082 19.6 0.4 1 23 858 880 858 880 0.98

16 17 0.023 2 8.9 4.5 1 23 890 912 890 912 0.98

17 17 3.7e-07 3.2e-05 24.0 1.3 1 23 918 940 918 940 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	7.5e-05	0.0064	16.8	1.4	1	23	466	488	466	488	0.96
2	17	1.5e-05	0.0013	19.0	1.9	1	20	494	513	494	516	0.94
3	17	2.5e-05	0.0021	18.3	0.7	1	23	522	544	522	544	0.98
4	17	6.1e-05	0.0052	17.0	4.4	1	21	550	570	550	572	0.95
5	17	1.9e-05	0.0016	18.7	4.6	1	23	578	600	578	600	0.99
6	17	1.9e-05	0.0016	18.7	5.3	1	23	606	628	606	628	0.97
7	17	7.2e-06	0.00061	20.0	7.1	1	23	634	656	634	656	0.97
8	17	7e-08	6e-06	26.3	2.7	1	23	662	684	662	684	0.98
9	17	5.2e-05	0.0044	17.3	6.7	1	23	690	712	690	712	0.97
10	17	1.6e-05	0.0014	18.9	5.8	1	23	718	740	718	740	0.98
11	17	4.3e-07	3.6e-05	23.8	2.9	1	23	746	768	746	768	0.98
12	17	2e-05	0.0017	18.6	9.1	1	23	774	796	774	796	0.98
13	17	2.6e-05	0.0022	18.2	7.5	1	23	802	824	802	824	0.98
14	17	0.00049	0.042	14.2	8.9	1	21	830	850	830	852	0.94
15	17	9.6e-06	0.00082	19.6	0.4	1	23	858	880	858	880	0.98
16	17	0.023	2	8.9	4.5	1	23	890	912	890	912	0.98
17	17	3.7e-07	3.2e-05	24.0	1.3	1	23	918	940	918	940	0.97

Sequence Information

Coding Sequence: ATGAACAGCGAACAGCATGCTTTGCCGGCCACTACGCAGGCGCAGCAAGAGGCGAACTTAGCTAGTAGCACCAGTCAAGGACAATTAGCGAGTTCCCAGCAGCAAGGTTCCACCTCGGACGCACGAGTAGGTACAGCAGCAGTAGCGTTAGCCTCCTCGGTAGCCAAGTATTGGGTCTTGACGGGTTTGTTTCCCGGGCCGCTGCCCCAGGTTTCGGTCTATCATACGCAGCAACAAAATTCCGCTGGTTCTCCGAGGAGCGTCGAAGTACAGATACAAAACAAAGAAGTTGTGGCAACATCGACGGCTTCCCACGAAATGGCACTCACCGCGGGGGGTGCGAACCATCAGAGTGAAAATGCTCACAGACATCATCAAAACGCAACGATTAACAATTCGGCAACGAGCAACAACAACAACAACAATCATACTAGCAACATAGTTCATGCCTCGTTGCAACAAAGTCCGCAGATTGCAGTCTCGCTGCCGGGCCTGAATCTAGACGGGACTCACATACAGGCGAGTCATTTGCAGGCTGCTCATGCACAGATGCAGCAACAGATGCAGTCCCAACAGCAGCAGCTGCATCAACAGCAGCAGCAGCAGCAGCAGCAACAACAACAACAACAGCAGCAGCAGCAGCAGCAACAACAGCAGCAGCAACAGCAACAACAACAGTCACAACAACAGGCTCATCACCAGATGCAAAGCCATCAAAACCCACAAAACAATGTACCAAATTCGCAGAATCAGAACGCTCAACGCGATGAAAACAAAGTCAAGGACGAGGGTGGCAGCTGCACCACCGAACGCTGCAGCGACAATCAAGTCCATTGTCAAGTTCAGTGCGACCTTCAACTTCAACAGCCACAAGACTTGCAACAAAGCATTATGCAACAACAACAACAGCAGCAGCAACAAATTGGCGTTAGCATAAGTGGCAATGCTGGCAATGACAATGGAAATTCCACCAAACCCGAGAAAGAAAAGGAATTGCGTCAACTAAACATGGCGCAATTTCAAGTCCCGGATCTGAAACCCGGTGGCCACATGATGGACGTGAGAACAGCCGATGGCTCGGTAGTGAAAATCAGCGCCGGAAACGAACAAGACCTCGCGAAATCTCTGGGCGTCGAAATGGTCCAAAACATGTACAAGGTCAATGTCGAGGATATCAACCAGCTGCTGGCTTATCACGAAGTCTTTGGGAAACTTCAGAGCGAAATTGCGGCTGGTACGACTCTCGTCGGTGGCACCGTACCCACGCAGACCGTCACGACCATACAGAATGGAACGCCGATCGTTCAACAAGTCCAACTCAACAAATTTGACATCAAGACTAGCGACGGCGAAGCGACACCTGGACCGAGCGCCTCCCCCGTTTCCGTTGGCAGTCACGCTTGCGAAGTTTGCGGCAAAATATTCCAATTTCGCTATCAACTTATCGTTCATCGCAGATATCATACCGAACGCAAACCCTTCACGTGTCAGGTGTGCGGCAAAGCCTTCTCAAACGCAAACGACCTCACTCGTCACGGTAAATGTCACTTGGGCGGCTCGATGTTTACGTGCGCGGTGTGTTTCCATGTATTTGCGAACGCGCCTTCTCTCGAGCGTCACATGAAACGTCACGCCACCGACAAACCGTACAATTGCACTGTTTGTGGCAAGAGTTTCGCGCGGAAAGAGCACCTCGACAACCACACGCGTTGTCACACCGGCGAAACACCGTACAGGTGTCAATATTGCGCCAAAACTTTCACCCGCAAAGAACACATGGTTAATCATGTCCGCAAACACACCGGGGAAACTCCTCATCGCTGTGACATTTGCAAAAAGAGCTTCACTCGGAAGGAACACTTTATGAACCACGTTATGTGGCACACTGGCGAAACACCTCATCATTGTCAAGTTTGCGGCAAAAAATACACTCGCAAAGAGCATCTCGCCAATCACATGCGATCGCACACTAACGATACGCCTTTCCGCTGTGAAATATGCGGCAAGTCGTTTACGAGGAAGGAGCACTTCACGAATCACATAATGTGGCACACCGGCGAGACGCCGCATCGCTGTGATTTCTGCTCGAAGACGTTCACCCGAAAGGAGCATCTACTGAACCACGTACGCCAGCACACGGGTGAGTCACCACACCGATGCGGCTTCTGCTCCAAATCGTTCACCAGAAAGGAACACCTTGTTAACCACATCCGCCAACACACAGGTGAAACACCCTTCCGCTGTCAATACTGTCCGAAAGCGTTTACGCGGAAGGACCACCTGGTTAACCACGTCAGGCAGCACACGGGCGAATCGCCACACCGATGCCACTTCTGCTCCAAGTCATTCACGCGAAAGGAACACTTGACGAATCACGTGAGAATCCACACCGGGGAATCTCCCCACAGATGTGAATTCTGTCAGAGGACCTTCACCAGGAAGGAACACCTCAATAATCATCTCCGTCAGCATACCGGAGATTCCTCTCATTGTTGCAACGTTTGCAACAAACCATTCACGAGAAAGGAACATCTCGTTAATCACATGAGATGTCACACGGGCGAACGTCCCTTCGTTTGTACCGAATGCGGCAAGAGTTTTCCGCTCAAGGGAAATCTTCTCTTCCACATGCGTTCGCACAACAAGGGCAGCAACGCGGAAAGACCCTTCAGATGCGATCTTTGCCCGAAGGACTTTATGTGCAAGGGCCATCTCGTTTCTCACAGGCGTTCCCATTCGGACGAGAGACCGCACAGTTGTCCGGATTGCGGAAAAACTTTTGTCGAGAAGGGCAACATGTTGCGACACTTGAGGAAACACGCTGCCGAAGGAGCGCCTACGCAAGTTACAACCGCCTCCGCAATTTCGCAGCCGGGTGTACTGCCGATACCAGCGGCCGCTGTACTCGTCGGACATCCTCTCGCACCCCCGGCACCGCCGGTTGTCCCACAGCACACTGTCGTCGTCCCAACACCACCGGGAGTCCTCGCCTCCTACTGA
Protein Sequence: MNSEQHALPATTQAQQEANLASSTSQGQLASSQQQGSTSDARVGTAAVALASSVAKYWVLTGLFPGPLPQVSVYHTQQQNSAGSPRSVEVQIQNKEVVATSTASHEMALTAGGANHQSENAHRHHQNATINNSATSNNNNNNHTSNIVHASLQQSPQIAVSLPGLNLDGTHIQASHLQAAHAQMQQQMQSQQQQLHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSQQQAHHQMQSHQNPQNNVPNSQNQNAQRDENKVKDEGGSCTTERCSDNQVHCQVQCDLQLQQPQDLQQSIMQQQQQQQQQIGVSISGNAGNDNGNSTKPEKEKELRQLNMAQFQVPDLKPGGHMMDVRTADGSVVKISAGNEQDLAKSLGVEMVQNMYKVNVEDINQLLAYHEVFGKLQSEIAAGTTLVGGTVPTQTVTTIQNGTPIVQQVQLNKFDIKTSDGEATPGPSASPVSVGSHACEVCGKIFQFRYQLIVHRRYHTERKPFTCQVCGKAFSNANDLTRHGKCHLGGSMFTCAVCFHVFANAPSLERHMKRHATDKPYNCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLVNHIRQHTGETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQRTFTRKEHLNNHLRQHTGDSSHCCNVCNKPFTRKEHLVNHMRCHTGERPFVCTECGKSFPLKGNLLFHMRSHNKGSNAERPFRCDLCPKDFMCKGHLVSHRRSHSDERPHSCPDCGKTFVEKGNMLRHLRKHAAEGAPTQVTTASAISQPGVLPIPAAAVLVGHPLAPPAPPVVPQHTVVVPTPPGVLASY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00899003;
90% Identity: iTF_00439661; iTF_00829699; iTF_01101510; iTF_01102984; iTF_01103721; iTF_01100778; iTF_01102235; iTF_01509042; iTF_00798740;
80% Identity: -