Basic Information

Insect: Ophion ellenae
Gene Symbol: -
Assembly: GCA_963210295.1
Location: OY723386.1:32188332-32210026[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0001 0.013 16.7 1.4 1 23 465 487 465 487 0.96

2 18 2.1e-05 0.0027 18.9 1.9 1 20 493 512 493 515 0.94

3 18 3.4e-05 0.0044 18.2 0.7 1 23 521 543 521 543 0.98

4 18 8.3e-05 0.011 17.0 4.4 1 21 549 569 549 571 0.95

5 18 2.6e-05 0.0033 18.6 4.6 1 23 577 599 577 599 0.99

6 18 2.6e-05 0.0033 18.6 5.3 1 23 605 627 605 627 0.97

7 18 9.8e-06 0.0013 19.9 7.1 1 23 633 655 633 655 0.97

8 18 9.5e-08 1.2e-05 26.3 2.7 1 23 661 683 661 683 0.98

9 18 7e-05 0.0091 17.2 6.7 1 23 689 711 689 711 0.97

10 18 2.2e-05 0.0028 18.8 5.8 1 23 717 739 717 739 0.98

11 18 5.8e-07 7.5e-05 23.8 2.9 1 23 745 767 745 767 0.98

12 18 8.6e-06 0.0011 20.1 7.8 1 23 773 795 773 795 0.98

13 18 2.7e-05 0.0035 18.5 9.1 1 23 801 823 801 823 0.98

14 18 3.6e-05 0.0046 18.2 7.5 1 23 829 851 829 851 0.98

15 18 0.00067 0.088 14.1 8.9 1 21 857 877 857 879 0.94

16 18 1.3e-05 0.0017 19.5 0.4 1 23 885 907 885 907 0.98

17 18 0.031 4.1 8.9 4.5 1 23 917 939 917 939 0.98

18 18 5e-07 6.6e-05 24.0 1.3 1 23 945 967 945 967 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0001	0.013	16.7	1.4	1	23	465	487	465	487	0.96
2	18	2.1e-05	0.0027	18.9	1.9	1	20	493	512	493	515	0.94
3	18	3.4e-05	0.0044	18.2	0.7	1	23	521	543	521	543	0.98
4	18	8.3e-05	0.011	17.0	4.4	1	21	549	569	549	571	0.95
5	18	2.6e-05	0.0033	18.6	4.6	1	23	577	599	577	599	0.99
6	18	2.6e-05	0.0033	18.6	5.3	1	23	605	627	605	627	0.97
7	18	9.8e-06	0.0013	19.9	7.1	1	23	633	655	633	655	0.97
8	18	9.5e-08	1.2e-05	26.3	2.7	1	23	661	683	661	683	0.98
9	18	7e-05	0.0091	17.2	6.7	1	23	689	711	689	711	0.97
10	18	2.2e-05	0.0028	18.8	5.8	1	23	717	739	717	739	0.98
11	18	5.8e-07	7.5e-05	23.8	2.9	1	23	745	767	745	767	0.98
12	18	8.6e-06	0.0011	20.1	7.8	1	23	773	795	773	795	0.98
13	18	2.7e-05	0.0035	18.5	9.1	1	23	801	823	801	823	0.98
14	18	3.6e-05	0.0046	18.2	7.5	1	23	829	851	829	851	0.98
15	18	0.00067	0.088	14.1	8.9	1	21	857	877	857	879	0.94
16	18	1.3e-05	0.0017	19.5	0.4	1	23	885	907	885	907	0.98
17	18	0.031	4.1	8.9	4.5	1	23	917	939	917	939	0.98
18	18	5e-07	6.6e-05	24.0	1.3	1	23	945	967	945	967	0.97

Sequence Information

Coding Sequence: ATGAATAGCGAACAGCACGCTCTGCCAGCCACTACGCAGGCGCAGCAAGAGGGTGGAAATTTGGCTAGTTCTACGAGTCAAGGACAAGTAGGAAGCACGCAGCAACCTTCTTCGCCAGATCTGCGTGTAGGTACAGCAGTAGCGTTAGCATCCTCGGTAGCTAAGTATTGGGTCCTGACCAATCTCTTTCCTGGACCGATACCCCAGGTCTCGGTCTATCATAACTCGCAAAATACCACATCGTCCTCGAGGGACACCTCAGCCACAACTGCCGTCGGTGATACACAATCTCAAAGCAAGGAAACAGCTGTTACTCCGATGTCCCATGCAATGGCTATTACCTCTGGTGCTCAGCATCAGGCCAATGCTTCTCATCAGCATCATCAAAATTCGGTAAACAACGTGGGAACGAATGGCAATACGGGCAACATCGTTCACGGCTCGTTGCACTCGGGCTCGCAGATTCCTGTCTCGCTGCCGGGCCTGAATCTCGACGGGACGCACATACAGGCGAGTCATTTGCAGGCTGCACACGCCCAGATGCAGCAGCAGATGCAGTCCCAGCAGCAACAGCTGcatcagcagcagcaacagcagcagcagcagcaacaacaacaacaacaacaacaacaacaacagcagcagcagcagcagcagcaacaacaacagcaacaacaatcGCAACAGCAGGCCCATCATCAAATGCAAAGTCATCAGAACCCACAGAACAatgtgacaaacgcgcaaaatCAGAACGCCCAGCGCGATGAGAACAAAGTGAAGGACGAGGGTGGCAGTTGCACCACCGAGCGTTGCGGTGATAATCAGGTCCACTGTCAAGTACAGTGCGACCTCCAGCTCCAGCAGCCACAAGATTTGCAACAGAGCATGatgcagcagcaacagcagcagcaacaaattGGCGTCAGTATAAGCGGAAACGCCGGCAACGACAATGGGAACGCGGTCAAATCGGAGAAGGACAAGGAGTTGCGCCAACTCAGCATGGCACAATTTCAAGTCCCGGACCTGAAGCCCGGTGGTCACATGATGGACGTGAGAACCGCCGATGGTTCGGTTGTCAAGATAAGCGCGGGCAACGAGCAAGATCTCGCTAAGACCCTCGGCGTCGAAATGGTCCAGAACATGTACAAAGTCAACGTCGAGGATATAAATCAACTTCTGGCTTATCACGAGGTATTTGGCAAGCTACAGAGCGAGATCGCAGCCGGAACTACACTCGTCGGTGGCACAGTACCGACCCAGACCGTCACCACGATACAGAACGGCACGCCGATAGTTCAGCAAGTACAGCTGAACAAATTCGACATAAAAACGAGCGACGGCGAGGCAACACCCGGACCGAGCGCTTCACCCGTGTCCGTTGGTAGCCACGCTTGCGAAGTTTGCGGCAAGATATTTCAATTTCGCTATCAACTTATCGTACATCGCAGATATCATACCGAGCGCAAACCCTTCACGTGTCAGGTATGCGGCAAAGCATTTTCAAACGCGAACGATCTGACGCGCCACGGCAAATGTCACCTCGGCGGCTCGATGTTCACTTGCGCCGTATGCTTTCACGTGTTCGCGAACGCTCCGTCCCTCGAGCGTCACATGAAACGCCACGCTACGGACAAACCCTACAATTGTACCGTGTGCGGAAAGAGTTTCGCTCGAAAAGAGCATCTCGACAATCATACGCGTTGTCACACCGGCGAAACGCCGTACAGGTGTCAATATTGCGCCAAGACGTTTACGCGCAAGGAGCATATGGTCAATCATGTGCGTAAACACACCGGCGAGACTCCCCATCGTTGCGACATATGCAAGAAGAGCTTCACGCGAAAGGAACACTTCATGAATCACGTTATGTGGCACACCGGCGAGACACCGCATCACTGTCAGGTCTGCGGTAAAAAATACACACGCAAGGAGCATCTGGCCAATCATATGCGTTCGCACACCAATGATACGCCTTTTCGCTGTGAAATTTGCGGCAAGTCGTTTACGAGGAAGGAGCACTTCACGAATCACATAATGTGGCACACTGGTGAGACGCCGCATCGCTGCGACTtctgttcgaagacgttcacgcGAAAGGAGCATCTACTAAACCACGTACGCCAGCACACGGGTGAGTCACCACACCGATGCGGCTTCTGCTCCAAATCGTTCACCAGAAAGGAACACCTTGTTAACCACATCCGCCAACACACAGGTGAAACACCCTTCCGCTGTCAATACTGTCCGAAAGCGTTTACGCGGAAGGACCACCTGGTTAACCACGTCAGGCAGCACACGGGTGAGTCACCGCACAAGTGCCAGTATTGCACCAAATCCTTCACGCGGAAGGAACATTTGACAAATCACGTGCGTCAACACACAGGCGAATCGCCACACCGATGTCACTTCTGCTCCAAGTCATTTACCCGAAAGGAGCACTTGACGAATCACGTGAGAATCCACACCGGCGAATCGCCGCACAGGTGTGAATTCTGTCAGAGGACCTTCACCAGGAAGGAACACCTCAATAATCATCTCCGTCAGCATACCGGAGATTCATCGCATTGTTGCAATGTCTGCAACAAACCGTTCACGAGAAAGGAACATCTCGTTAATCATATGAGATGTCACACGGGCGAGCGTCCTTTCGTGTGCACCGAGTGCGGCAAGAGTTTCCCCCTGAAAGGCAATCTGCTCTTTCACATGCGTTCGCACAACAAGGGCAGCACCGCCGAGCGACCCTTCAGGTGTGATCTATGCCCAAAGGACTTCATGTGCAAGGGTCATCTAGTGTCGCATCGGCGTTCGCACTCGGACGAAAGACCGCACAGTTGTCCCGATTGTGGAAAAACGTTCGTGGAGAAGGGCAACATGTTGCGACACTTGAGGAAGCACGCGGCCGAAGGTGCACCGACCCAGGTTACAACGGCATCGGCGATCCCACAGCCGGGTGTGTTACCGATCCCGGCGGCCGCTGTCCTCGTTGGGCATCCGCTCGCGCCACCAGCACCACCCGTCGTGCCGCAACACACGGTTGTCGTACCAACGCCACCGGGAGTTCTCGCCTCGTATTGA
Protein Sequence: MNSEQHALPATTQAQQEGGNLASSTSQGQVGSTQQPSSPDLRVGTAVALASSVAKYWVLTNLFPGPIPQVSVYHNSQNTTSSSRDTSATTAVGDTQSQSKETAVTPMSHAMAITSGAQHQANASHQHHQNSVNNVGTNGNTGNIVHGSLHSGSQIPVSLPGLNLDGTHIQASHLQAAHAQMQQQMQSQQQQLHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSQQQAHHQMQSHQNPQNNVTNAQNQNAQRDENKVKDEGGSCTTERCGDNQVHCQVQCDLQLQQPQDLQQSMMQQQQQQQQIGVSISGNAGNDNGNAVKSEKDKELRQLSMAQFQVPDLKPGGHMMDVRTADGSVVKISAGNEQDLAKTLGVEMVQNMYKVNVEDINQLLAYHEVFGKLQSEIAAGTTLVGGTVPTQTVTTIQNGTPIVQQVQLNKFDIKTSDGEATPGPSASPVSVGSHACEVCGKIFQFRYQLIVHRRYHTERKPFTCQVCGKAFSNANDLTRHGKCHLGGSMFTCAVCFHVFANAPSLERHMKRHATDKPYNCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLVNHIRQHTGETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQRTFTRKEHLNNHLRQHTGDSSHCCNVCNKPFTRKEHLVNHMRCHTGERPFVCTECGKSFPLKGNLLFHMRSHNKGSTAERPFRCDLCPKDFMCKGHLVSHRRSHSDERPHSCPDCGKTFVEKGNMLRHLRKHAAEGAPTQVTTASAIPQPGVLPIPAAAVLVGHPLAPPAPPVVPQHTVVVPTPPGVLASY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00899003;
90% Identity: iTF_00828955;
80% Identity: -