Basic Information

Insect: Heteropelma amictum
Gene Symbol: -
Assembly: GCA_959613375.1
Location: OY390725.1:4706746-4715595[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 8.1e-05 0.0072 16.8 1.4 1 23 442 464 442 464 0.96

2 17 1.6e-05 0.0015 19.0 1.9 1 20 470 489 470 492 0.94

3 17 2.7e-05 0.0024 18.3 0.7 1 23 498 520 498 520 0.98

4 17 6.6e-05 0.0059 17.1 4.4 1 21 526 546 526 548 0.95

5 17 2e-05 0.0018 18.7 4.6 1 23 554 576 554 576 0.99

6 17 2e-05 0.0018 18.7 5.3 1 23 582 604 582 604 0.97

7 17 7.8e-06 0.00069 20.0 7.1 1 23 610 632 610 632 0.97

8 17 7.6e-08 6.8e-06 26.4 2.7 1 23 638 660 638 660 0.98

9 17 5.6e-05 0.005 17.3 6.7 1 23 666 688 666 688 0.97

10 17 1.7e-05 0.0015 18.9 5.8 1 23 694 716 694 716 0.98

11 17 4.6e-07 4.1e-05 23.9 2.9 1 23 722 744 722 744 0.98

12 17 1.3e-05 0.0011 19.4 3.8 1 20 750 769 750 770 0.96

13 17 0.035 3.1 8.5 4.2 7 23 768 784 768 784 0.95

14 17 0.00053 0.048 14.2 8.9 1 21 790 810 790 812 0.94

15 17 1e-05 0.00093 19.6 0.4 1 23 818 840 818 840 0.98

16 17 0.025 2.2 9.0 4.5 1 23 850 872 850 872 0.98

17 17 4e-07 3.6e-05 24.1 1.3 1 23 878 900 878 900 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	8.1e-05	0.0072	16.8	1.4	1	23	442	464	442	464	0.96
2	17	1.6e-05	0.0015	19.0	1.9	1	20	470	489	470	492	0.94
3	17	2.7e-05	0.0024	18.3	0.7	1	23	498	520	498	520	0.98
4	17	6.6e-05	0.0059	17.1	4.4	1	21	526	546	526	548	0.95
5	17	2e-05	0.0018	18.7	4.6	1	23	554	576	554	576	0.99
6	17	2e-05	0.0018	18.7	5.3	1	23	582	604	582	604	0.97
7	17	7.8e-06	0.00069	20.0	7.1	1	23	610	632	610	632	0.97
8	17	7.6e-08	6.8e-06	26.4	2.7	1	23	638	660	638	660	0.98
9	17	5.6e-05	0.005	17.3	6.7	1	23	666	688	666	688	0.97
10	17	1.7e-05	0.0015	18.9	5.8	1	23	694	716	694	716	0.98
11	17	4.6e-07	4.1e-05	23.9	2.9	1	23	722	744	722	744	0.98
12	17	1.3e-05	0.0011	19.4	3.8	1	20	750	769	750	770	0.96
13	17	0.035	3.1	8.5	4.2	7	23	768	784	768	784	0.95
14	17	0.00053	0.048	14.2	8.9	1	21	790	810	790	812	0.94
15	17	1e-05	0.00093	19.6	0.4	1	23	818	840	818	840	0.98
16	17	0.025	2.2	9.0	4.5	1	23	850	872	850	872	0.98
17	17	4e-07	3.6e-05	24.1	1.3	1	23	878	900	878	900	0.97

Sequence Information

Coding Sequence: ATGAATAACGATCAGCACGCTCTGCCGGCCACCACGCAGGCGCAGCAAGAgGGAAATTTGGCTAGTACAACGAGTCAAGGACAAGTAGGAAGTACGCAGCAAGCTTCGTCGACAGATCTACGCGTAGGTACAGCAGTAGCGTTAGCTTCTTCCGTAGCTAAATATTGGGTCTTGACAAATTTATTCCCCGGGCCGATACCGCAAGTCTCGGTCTATCATACCCAACCAAATTCCCCGAGGAATACGTCTATCGCGGATACACAATTGCAAAACAAGGAAACAGTTCCGACATCAATTTCACACGAGATGTCGCTTACCGCCGTAACTCAGCATCAGCATCATCAAAATTCCGTTAACGGCGTAACGACGAACAACAATAACGGCAACAACATCGTTCATGGCTCGTTACAATCGAGCGCGCAGATTCCAGTCTCGCTGCCGGGCCTGAATCTCGACGGAGCTCACATACAAGCGAGCCACTTGCAAGCTGCACACGCACAAATGCAGCAGCAGATGCAATCGCAGCAACAGCTGCatcagcaacaacagcagcagcagcagcagcagcaacagcagcaacaacaacagcaacagcaacaacagcagcagcagcagcagcagtctCAGCAACAAGCGCATCATCAGATGCAGAGTCATCAGAATCAACAGAACAATGTACCAAATCAGCAGAATCAGAATTCTCAACGAGATGAGAATAAAATCAAGGACGAGGGTGGTAGCTGCACCACCGAGCGTTGCAGCGATAATCAAGTTCATTGCCAAGTACAATGCGATCTGCAGCTTCAGCAGCCGCAAGATTTGCAACAGAGTATGatgcaacagcagcagcaacaaatCGGCATTAGCGGAAATAACGGCAATGACAATGGCAATGCCGCCAAgcccgaaaaagaaaaggaactTCGTCAACTCAACATGGCGCAATTTCAAGTGCCCGATCTAAAGCCCGGTGGTCACATGATGGATGTCAGAACCGCGGACGGTTCGGTGGTTAAGATAAGCGCCGGTAACGAGCAAGATCTCGCCAAGACTCTCGGCGTCGAAATGGTCCAGAATATGTACAAGGTCAACGTCGAGGACATCAACCAGCTTCTCGCTTATCACGAAGTGTTTGGCAAGCTTCAGAGCGAAATTGCAGCTGGCACTACCCTCGTCGGTGGTACTGTACCGACGCAGACGGTTACGACGATACAGAATGGCACACCGATCGTTCAGCAAGTCCAGCTCAACAAATTTGATATAAAAACGAGCGACGGCGAGGCAACGCCGGGACCAAGCGCCTCCCCGGTTTCGGTCGGCAGTCACGCGTGCGAAGTCTGCggcaaaatatttcaatttcgttATCAACTTATCGTACATCGCAGATATCACACCGAACGCAAGCCCTTTACCTGTCAGGTTTGCGGCAAAGCATTTTCCAACGCGAACGATCTGACCCGCCACGGAAAATGCCACCTCGGCGGCTCGATGTTCACTTGCGCCGTGTGCTTTCACGTGTTCGCAAACGCACCGTCACTGGAGCGCCACATGAAGCGTCACGCCACCGACAAACCGTACAATTGCACCGTTTGCGGCAAGAGCTTCGCCCGAAAGGAGCATCTCGATAATCACACGCGTTGTCACACCGGTGAAACTCCGTACAGGTGTCAGTACTGCGCCAAAACTTTCACGCGCAAGGAGCACATGGTTAACCACGTACGCAAACACACCGGCGAGACGCCTCATCGTTGTGACATTTGCAAGAAGAGCTTCACGCGAAAGGAACACTTTATGAATCACGTTATGTGGCACACCGGCGAAACCCCGCATCACTGTCAGGTCTGCGGTAAAAAGTACACCCGCAAGGAACACTTGGCCAATCATATGCGCTCTCACACCAATGATACGCCTTTCCGCTGTGAAATTTGCGGCAAGTCGTTTACGAGGAAGGAACACTTTACGAATCACATAATGTGGCACACCGGCGAGACGCCGCATCGCTGCGATTTCTGCTCAAAGACGTTCACGAGAAAGGAGCATCTACTGAACCACGTACGCCAGCACACGGGTGAGTCACCACACCGATGCGGCTTCTGCTCCAAATCGTTCACCAGAAAGGAACACCTTGTTAACCACATCCGCCAACACACAGGTGAAACGCCCTTCCGCTGTCAATATTGTCCGAAAGCGTTTACGCGGAAGGACCACCTGGTTAACCACGTCAGGCAGCACACGGGTGAGTCACCGCACAAGTGCCAGTATTGCACCAAATCGTTCACGCGGAAGGAACATTTGACAAATCACAGGACCTTTACCAGGAAGGAACATCTCAATAATCATCTCCGTCAACACACCGGAGATTCCTCGCACTGTTGCAACGTTTGCAACAAACCTTTCACGAGAAAGGAACATCTCGTTAATCACATGAGATGCCACACTGGCGAACGTCCGTTCGTGTGCACCGAATGCGGCAAGAGTTTCCCGCTGAAGGGCAATCTTCTGTTCCACATGCGCTCGCACAACAAAGGCTCGAACGCCGAAAGACCATTCCGATGTGATCTTTGCCCGAAGGACTTTATGTGCAAGGGCCATCTAGTTTCGCATCGACGATCGCACTCGGACGAGCGGCCGCACAGCTGCCCCGATTGCGGCAAAACGTTCGTCGAGAAGGGAAACATGTTGCGACATTTGAGAAAACACGCCGCCGAAGGAGCCCCGACTCAGGTCACAGCCGCGTCGGCGGCAATTTCCCAACCCGGCGTCCTGCCGATACCAGCTGCTGCTGTTCTCGTCGGACATCCGCTTGCGCCACCAGCGCCACCCGTTGTGCCGCAACACACGGTTGTCGTTCCAACACCACCGGGTGTACTCGCCTCTTATTGA
Protein Sequence: MNNDQHALPATTQAQQEGNLASTTSQGQVGSTQQASSTDLRVGTAVALASSVAKYWVLTNLFPGPIPQVSVYHTQPNSPRNTSIADTQLQNKETVPTSISHEMSLTAVTQHQHHQNSVNGVTTNNNNGNNIVHGSLQSSAQIPVSLPGLNLDGAHIQASHLQAAHAQMQQQMQSQQQLHQQQQQQQQQQQQQQQQQQQQQQQQQQQQSQQQAHHQMQSHQNQQNNVPNQQNQNSQRDENKIKDEGGSCTTERCSDNQVHCQVQCDLQLQQPQDLQQSMMQQQQQQIGISGNNGNDNGNAAKPEKEKELRQLNMAQFQVPDLKPGGHMMDVRTADGSVVKISAGNEQDLAKTLGVEMVQNMYKVNVEDINQLLAYHEVFGKLQSEIAAGTTLVGGTVPTQTVTTIQNGTPIVQQVQLNKFDIKTSDGEATPGPSASPVSVGSHACEVCGKIFQFRYQLIVHRRYHTERKPFTCQVCGKAFSNANDLTRHGKCHLGGSMFTCAVCFHVFANAPSLERHMKRHATDKPYNCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLVNHIRQHTGETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHRTFTRKEHLNNHLRQHTGDSSHCCNVCNKPFTRKEHLVNHMRCHTGERPFVCTECGKSFPLKGNLLFHMRSHNKGSNAERPFRCDLCPKDFMCKGHLVSHRRSHSDERPHSCPDCGKTFVEKGNMLRHLRKHAAEGAPTQVTAASAAISQPGVLPIPAAAVLVGHPLAPPAPPVVPQHTVVVPTPPGVLASY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01509042;
90% Identity: iTF_00828955;
80% Identity: -