Basic Information

Insect: Ophion ventricosus
Gene Symbol: -
Assembly: GCA_963932345.1
Location: OZ010721.1:11248275-11269128[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 9.2e-05 0.0083 16.7 1.4 1 23 462 484 462 484 0.96

2 18 1.9e-05 0.0017 18.9 1.9 1 20 490 509 490 512 0.94

3 18 3.1e-05 0.0027 18.2 0.7 1 23 518 540 518 540 0.98

4 18 7.5e-05 0.0067 17.0 4.4 1 21 546 566 546 568 0.95

5 18 2.3e-05 0.0021 18.6 4.6 1 23 574 596 574 596 0.99

6 18 2.3e-05 0.0021 18.6 5.3 1 23 602 624 602 624 0.97

7 18 8.8e-06 0.00079 19.9 7.1 1 23 630 652 630 652 0.97

8 18 8.6e-08 7.7e-06 26.3 2.7 1 23 658 680 658 680 0.98

9 18 6.4e-05 0.0057 17.2 6.7 1 23 686 708 686 708 0.97

10 18 2e-05 0.0018 18.8 5.8 1 23 714 736 714 736 0.98

11 18 5.2e-07 4.7e-05 23.8 2.9 1 23 742 764 742 764 0.98

12 18 7.8e-06 0.0007 20.1 7.8 1 23 770 792 770 792 0.98

13 18 2.5e-05 0.0022 18.5 9.1 1 23 798 820 798 820 0.98

14 18 3.2e-05 0.0029 18.2 7.5 1 23 826 848 826 848 0.98

15 18 0.00061 0.054 14.1 8.9 1 21 854 874 854 876 0.94

16 18 1.2e-05 0.0011 19.5 0.4 1 23 882 904 882 904 0.98

17 18 0.028 2.5 8.9 4.5 1 23 914 936 914 936 0.98

18 18 4.6e-07 4.1e-05 24.0 1.3 1 23 942 964 942 964 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	9.2e-05	0.0083	16.7	1.4	1	23	462	484	462	484	0.96
2	18	1.9e-05	0.0017	18.9	1.9	1	20	490	509	490	512	0.94
3	18	3.1e-05	0.0027	18.2	0.7	1	23	518	540	518	540	0.98
4	18	7.5e-05	0.0067	17.0	4.4	1	21	546	566	546	568	0.95
5	18	2.3e-05	0.0021	18.6	4.6	1	23	574	596	574	596	0.99
6	18	2.3e-05	0.0021	18.6	5.3	1	23	602	624	602	624	0.97
7	18	8.8e-06	0.00079	19.9	7.1	1	23	630	652	630	652	0.97
8	18	8.6e-08	7.7e-06	26.3	2.7	1	23	658	680	658	680	0.98
9	18	6.4e-05	0.0057	17.2	6.7	1	23	686	708	686	708	0.97
10	18	2e-05	0.0018	18.8	5.8	1	23	714	736	714	736	0.98
11	18	5.2e-07	4.7e-05	23.8	2.9	1	23	742	764	742	764	0.98
12	18	7.8e-06	0.0007	20.1	7.8	1	23	770	792	770	792	0.98
13	18	2.5e-05	0.0022	18.5	9.1	1	23	798	820	798	820	0.98
14	18	3.2e-05	0.0029	18.2	7.5	1	23	826	848	826	848	0.98
15	18	0.00061	0.054	14.1	8.9	1	21	854	874	854	876	0.94
16	18	1.2e-05	0.0011	19.5	0.4	1	23	882	904	882	904	0.98
17	18	0.028	2.5	8.9	4.5	1	23	914	936	914	936	0.98
18	18	4.6e-07	4.1e-05	24.0	1.3	1	23	942	964	942	964	0.97

Sequence Information

Coding Sequence: ATGAACAGCGAACAGCACGCTCTGCCAGCTACTACGCAGGCGCAGCAAGAGGGTGGAAATTTGGCTAGTTCTACGAGTCAAGGACAAGTAGGAAGCGCGCAGCAAGCTTCTTCGGCAGATCTGCGTGTAGGTACAGCAGTAGCGTTAGCATCCTCGGTAGCTAAGTATTGGGTCCTGACCAATCTCTTTCCCGGACCGATACCCCAGGTCTCGGTCTATCATAACTCGCAAAATACCACATCATCCACGAGGAACACCTCGGCCGCAACTGCCGTTGGTGATATACAATCTCAAAGCAAGGAAACAGCCGCTACTTCGATGTCTCACGCGATGGCTATTACCTCGGGTGCTCAGCATCAGGCAAACACTTCGCATCAGCATCATCAAAATTCAGTGAACAGCGCCGGAACGAATGGCAATGCCGGCAACATCGTTCATGGCTCATTGCACTCGAGCTCGCAGatTCCAGTCTCGCTGCCGGGCCTGAATCTAGACGGGACTCACATACAGGCGAGTCATTTGCAGGCTGCGCACGCCCAGATGCAGCAGCAGATGCAGTCCCAGCAGCAACAGCTgcatcagcagcagcagcaacaacagcaacagcaacaacaacaacagcaacaacaacaacagcagcagcagcaacaacaacaacagcaacaacagtcGCAACAGCAGGCCCATCATCAGATGCAAAGCCATCAGAATCCACAGAACAATGTGACAAACTCGCAGAATCAGAACGCCCAACGCGATGAGAATAAAGTGAAGGATGAGGGTGGCAGTTGCACCACCGAGCGTTGCGGCGACAATCAGGTCCACTGTCAAGTGCAGTGCGACCTTCAGCTCCAACAGCCACAAGATTTGCAACAAAGCATgatgcagcagcaacagcagcagcaacagatTGGCGTCAGTATAAGCGGAAACGCCGGCAACGACAATGGGAACGCGGTCAAGTCGGAAAAGGACAAGGAGTTGCGCCAACTCAACATGGCACAATTTCAGGTCCCGGATCTAAAGCCCGGCGGTCACATGATGGACGTGAGAACCGCCGATGGCTCGGTAGTCAAGATAAGCGCGGGCAACGAGCAAGATCTGGCAAAGACCCTCGGCGTCGAAATGGTCCAAaacatgtacaaggtcaacgttGAGGATATCAATCAACTTTTGGCTTATCACGAGGTATTCGGCAAGCTACAGAGTGAAATCGCGGCCGGCACTACACTCGTTGGTGGTACAGTACCGACCCAGACCGTCACGACGATACAGAACGGCACGCCGATAGTTCAGCAAGTACAGCTCAACAAATTCGACATAAAGACGAGCGACGGCGAAGCAACGCCCGGACCAAGTGCTTCACCCGTGTCCGTTGGTAGCCACGCTTGCGAAGTTTGCGGCAAGATATTTCAATTTCGCTATCAACTTATCGTACATCGCAGATATCATACCGAGCGCAAACCCTTCACGTGTCAGGTATGCGGTAAAGCATTTTCTAACGCGAACGACCTGACGCGTCATGGCAAATGTCATCTCGGCGGCTCGATGTTCACTTGCGCCGTGTGTTTTCACGTGTTCGCGAACGCCCCGTCTCTCGAGCGTCACATGAAACGGCACGCTACGGACAAACCTTACAATTGTACCGTATGCGGCAAGAGTTTCGCCCGAAAGGAACATCTCGATAATCACACGCGTTGTCACACCGGCGAAACGCCGTACAGGTGTCAATATTGCGCCAAAACGTTCACGCGCAAGGAGCATATGGTCAATCATGTGCGTAAACACACCGGCGAAACTCCCCATCGTTGCGACATATGCAAGAAGAGCTTCACGCGAAAGGAACACTTCATGAATCATGTTATGTGGCACACCGGCGAGACACCCCATCACTGTCAGGTCTgcggaaaaaaatacacacgcaAGGAGCATCTAGCCAATCATATGCGCTCGCACACCAATGATACGCCTTTCCGCTGTGAAATTTGCGGCAAGTCGTTTACGAGGAAGGAGCACTTCACGAATCACATAATGTGGCACACTGGGGAGACGCCGCATCGCTGCGACTTCTGCTCGAAGACGTTCACGCGAAAGGAGCATCTACTGAACCACGTACGCCAGCACACGGGTGAGTCACCACACCGATGCGGCTTCTGCTCCAAATCGTTCACCAGAAAGGAACACCTTGTTAACCACATCCGCCAACACACAGGTGAAACACCCTTCCGCTGTCAATACTGTCCGAAAGCGTTTACGCGGAAGGACCACCTGGTTAACCACGTCAGGCAGCACACGGGTGAGTCACCGCACAAGTGCCAGTATTGCACCAAATCCTTCACGCGGAAGGAACATTTGACAAATCACGTGCGTCAACACACAGGCGAATCGCCACACCGATGTCACTTCTGCTCCAAGTCATTTACCCGAAAGGAGCACTTGACGAATCACGTGAGAATCCACACCGGCGAATCGCCGCACAGGTGTGAATTCTGTCAGAGGACCTTCACCAGGAAGGAACACCTCAATAATCATCTCCGTCAGCATACCGGAGATTCATCGCATTGTTGCAACGTTTGCAACAAACCGTTCACGAGAAAGGAACATCTCGTTAATCATATGAGATGTCACACGGGCGAGCGTCCTTTCGTGTGCACCGAGTGCGGCAAGAGTTTCCCCCTTAAGGGCAATTTGCTCTTCCACATGCGTTCGCACAACAAGGGCAGCAACGCCGAGCGACCCTTCAGATGTGATCTTTGCCCGAAGGACTTCATGTGCAAAGGTCATTTAGTGTCGCATCGCCGTTCGCATTCGGACGAGAGACCGCACAGTTGTCCCGATTGCGGTAAAACCTTCGTGGAGAAGGGCAACATGTTGCGACACTTGAGAAAGCACGCGGCCGAAGGTGCACCGACTCAGGTGACAACGGCATCGGCGATCTCGCAGCCGGGTGTATTGCCGATCCCGGCGGCCGCTGTCCTCGTTGGACATCCACTCGCGCCACCAGCGCCGCCCGTTGTGCCGCAACACACGGTTGTCGTACCAACGCCACCTGGAGTTCTCGCCTCGTATTGA
Protein Sequence: MNSEQHALPATTQAQQEGGNLASSTSQGQVGSAQQASSADLRVGTAVALASSVAKYWVLTNLFPGPIPQVSVYHNSQNTTSSTRNTSAATAVGDIQSQSKETAATSMSHAMAITSGAQHQANTSHQHHQNSVNSAGTNGNAGNIVHGSLHSSSQIPVSLPGLNLDGTHIQASHLQAAHAQMQQQMQSQQQQLHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSQQQAHHQMQSHQNPQNNVTNSQNQNAQRDENKVKDEGGSCTTERCGDNQVHCQVQCDLQLQQPQDLQQSMMQQQQQQQQIGVSISGNAGNDNGNAVKSEKDKELRQLNMAQFQVPDLKPGGHMMDVRTADGSVVKISAGNEQDLAKTLGVEMVQNMYKVNVEDINQLLAYHEVFGKLQSEIAAGTTLVGGTVPTQTVTTIQNGTPIVQQVQLNKFDIKTSDGEATPGPSASPVSVGSHACEVCGKIFQFRYQLIVHRRYHTERKPFTCQVCGKAFSNANDLTRHGKCHLGGSMFTCAVCFHVFANAPSLERHMKRHATDKPYNCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLVNHIRQHTGETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQRTFTRKEHLNNHLRQHTGDSSHCCNVCNKPFTRKEHLVNHMRCHTGERPFVCTECGKSFPLKGNLLFHMRSHNKGSNAERPFRCDLCPKDFMCKGHLVSHRRSHSDERPHSCPDCGKTFVEKGNMLRHLRKHAAEGAPTQVTTASAISQPGVLPIPAAAVLVGHPLAPPAPPVVPQHTVVVPTPPGVLASY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00899003;
90% Identity: iTF_00828955;
80% Identity: -