Basic Information

Insect: Venturia canescens
Gene Symbol: -
Assembly: None
Location: scaffold:3140-10956[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 7.5e-05 0.0086 16.8 1.4 1 23 477 499 477 499 0.96

2 17 2.2 2.5e+02 2.7 0.2 8 20 506 518 505 521 0.88

3 17 2.5e-05 0.0029 18.3 0.7 1 23 527 549 527 549 0.98

4 17 6.1e-05 0.007 17.0 4.4 1 21 555 575 555 577 0.95

5 17 1.9e-05 0.0022 18.6 4.6 1 23 583 605 583 605 0.99

6 17 1.9e-05 0.0022 18.6 5.3 1 23 611 633 611 633 0.97

7 17 7.2e-06 0.00083 20.0 7.1 1 23 639 661 639 661 0.97

8 17 7e-08 8e-06 26.3 2.7 1 23 667 689 667 689 0.98

9 17 5.2e-05 0.0059 17.3 6.7 1 23 695 717 695 717 0.97

10 17 4.3e-07 4.9e-05 23.8 2.9 1 23 723 745 723 745 0.98

11 17 6.3e-06 0.00073 20.1 7.8 1 23 751 773 751 773 0.98

12 17 2e-05 0.0023 18.6 9.1 1 23 779 801 779 801 0.98

13 17 2.6e-05 0.003 18.2 7.5 1 23 807 829 807 829 0.98

14 17 0.00049 0.057 14.2 8.9 1 21 835 855 835 857 0.94

15 17 9.6e-06 0.0011 19.6 0.4 1 23 863 885 863 885 0.98

16 17 0.023 2.6 8.9 4.5 1 23 895 917 895 917 0.98

17 17 3.7e-07 4.3e-05 24.0 1.3 1 23 923 945 923 945 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	7.5e-05	0.0086	16.8	1.4	1	23	477	499	477	499	0.96
2	17	2.2	2.5e+02	2.7	0.2	8	20	506	518	505	521	0.88
3	17	2.5e-05	0.0029	18.3	0.7	1	23	527	549	527	549	0.98
4	17	6.1e-05	0.007	17.0	4.4	1	21	555	575	555	577	0.95
5	17	1.9e-05	0.0022	18.6	4.6	1	23	583	605	583	605	0.99
6	17	1.9e-05	0.0022	18.6	5.3	1	23	611	633	611	633	0.97
7	17	7.2e-06	0.00083	20.0	7.1	1	23	639	661	639	661	0.97
8	17	7e-08	8e-06	26.3	2.7	1	23	667	689	667	689	0.98
9	17	5.2e-05	0.0059	17.3	6.7	1	23	695	717	695	717	0.97
10	17	4.3e-07	4.9e-05	23.8	2.9	1	23	723	745	723	745	0.98
11	17	6.3e-06	0.00073	20.1	7.8	1	23	751	773	751	773	0.98
12	17	2e-05	0.0023	18.6	9.1	1	23	779	801	779	801	0.98
13	17	2.6e-05	0.003	18.2	7.5	1	23	807	829	807	829	0.98
14	17	0.00049	0.057	14.2	8.9	1	21	835	855	835	857	0.94
15	17	9.6e-06	0.0011	19.6	0.4	1	23	863	885	863	885	0.98
16	17	0.023	2.6	8.9	4.5	1	23	895	917	895	917	0.98
17	17	3.7e-07	4.3e-05	24.0	1.3	1	23	923	945	923	945	0.97

Sequence Information

Coding Sequence: ATGAATAGCGAACAGCATACTATACCAGCCGCCTCGCAGGCCCAGCAAGAGGCAAATGTAGCTAGTAACACGAGTCAAGGACAATTAGGGAATGCGCAGCAACAAGCTTCTTCCTCGGATGTACGAGTAGGTACGCCGGCGGTAGCGTTAGCCTCCTCGGTAGCCAAGTATTGGGTCTTGACGGGTTTGTTTCCCGGGCCGATACCCCAGGTTTCGGTCTATCATACTCAACAACAAAATTCCATCGGCTCTCAAAGGAGCGCCGAATTACAAAACCAAAATAAAGAAGCTGTCCAAGCTGGAACAGGATCTCATCAGATTGCCGCAGTCGGAGGAAATCTCATTCTTCGGAGCGACGACACTCATCGACATCATCATCAAAAATCTGCTATTAACAATTCTCCTACCACAACCGCTATCACCGCCGCCACCGCTACTACCACCAACAATAGCAACAATAATAATCTGGGCAACGGCACGGTTGATACCCCGTTGCAATCGGGCCCACAGATTGCAGTCTCGCTGCCGGGCCTGAATCTAGACGGGACTCACATACAGGCGAGTCATTTGCAGGCTGCTCACGCACAGATGCAGCAACAGATGCAGTCTCAACAGCAACAGCTGCATCAACAGCAGCAGCAGCAGCAACAGCAACAACAGCAGCAGCAGCAGCAACAACAACAACAACAACAACAACAACAACAACAACAACAGACACAACAACAGGCGCATCATCAGATGCAAAGTCATCAAAATCCTCAAAACAATGTCACAAATTCACAAAATCAGAACGCCCAGCGAGATGAAAACAAAGTTAAGGATGAGGGCGGTAGCTGTACCACCGAACGCTGTAGCGATAATCAAGTTCATTGTCAAGTTCAGTGCGATCTTCAGCTTCAACAACCGCAAGATTTGCAACAGAGCATTATGCAGCAGCAGCAGCAGCAGCAAATCGGCGTTAGTATAAGCGGTAATGCTGGTGGCAACGATAATGGAACTGCAACGAAACCTGAGAAAGAAAAGGAACTGCGTCAACTAAACATGGCACAGTTTCAAGTACCAGACTTGAAACCCGGTGGTCACATGATGGACGTAAGAACAGCGGATGGTTCGGTAGTGAAGATAAGCGCTGGAAATGAGCAAGATCTCGCTAAGACTCTTGGTGCTGAAATGGTCCAAAACATGTATAAGGTTAACGTTGAGGATATAAACCAATTGCTCGCTTATCACGAAGTATTTGGGAAACTTCAGAGCGAAATAGCAGCTGGTACGACACTCGTTGGTGGGACAGTACCCACTCAAACTGTTACTACTATACAGAATGGAACACCGATCGTTCAACAAGTACAGCTCAACAAATTTGACATCAAGACTAGTGACGGCGAGGCAACGCCTGGACCAAGCGCTTCGCCCGTATCCGTTGGGAGTCACGCTTGCGAAGTTTGCGGCAAAATATTCCAATTTCGCTATCAGCTTATCGTCCATCGGAGATATCATACCGAACGGAAACCCTTCACGTCATTCTCGAACGCGAACGATCTGACTCGTCATGGTAAATGTCATTTGGGTGGTTCAATGTTCACGTGTGCGGTGTGTTTTCACGTTTTTGCAAACGCGCCTTCTCTTGAGCGTCACATGAAACGTCACGCGACCGACAAGCCGTACAATTGCACCGTTTGTGGCAAAAGTTTCGCACGGAAAGAGCATCTTGACAACCATACGCGTTGTCACACCGGCGAAACTCCGTACAGGTGTCAATATTGCGCAAAAACTTTCACCCGCAAAGAGCATATGGTCAATCACGTGCGCAAACACACCGGTGAAACTCCTCATCGTTGTGACATTTGCAAGAAGAGCTTCACCCGTAAGGAACACTTTATGAATCATGTTATGTGGCATACCGGCGAAACACCTCATCATTGTCAAGTTTGTGGCAAAAAATATACTCGCAAAGAACATCTCGCCAATCATATGCGATCGCACACCAATGATACGCCTTTTCGTTGTGAAATATGTGGCAAGTCGTTTACGAGGAAGGAGCACTTCACGAATCACATAATGTGGCACACCGGTGAGACACCGCATCGCTGTGATTTCTGCTCCAAGACGTTTACCCGAAAGGAACATCTCCTGAACCACGTACGCCAGCACACGGGTGAAACACCCTTTCGCTGTCAATACTGTCCGAAAGCGTTTACGCGGAAGGACCACCTGGTTAACCACGTCAGGCAGCACACGGGTGAGTCACCGCACAAGTGCCAGTATTGCACCAAATCGTTCACGCGGAAGGAACATTTGACAAATCACGTGCGTCAACACACAGGCGAATCGCCACATCGATGCCACTTCTGCTCAAAGTCGTTCACGCGGAAGGAACACTTGACGAATCACGTGAGAATCCACACCGGGGAATCCCCCCACAGATGTGAATTCTGTCAGAGGACTTTCACCAGAAAGGAACATCTCAATAATCATCTACGTCAGCACACCGGAGATTCATCCCATTGTTGTAACGTTTGCAACAAACCATTCACGAGAAAGGAACATCTTGTTAATCACATGCGATGTCATACGGGTGAACGGCCCTTCGTGTGTACAGAATGCGGCAAGAGTTTTCCCCTCAAGGGGAACCTTCTCTTTCATATGCGCTCGCACAACAAGGGCAGCAACGCCGAAAGACCATTCAGATGCGATCTTTGCCCCAAAGACTTCATGTGCAAGGGTCATCTCGTATCACACAGGCGTTCGCATTCCGACGAGAGACCGCATAGCTGTCCAGATTGCGGCAAAACTTTTGTCGAAAAAGGCAACATGTTGCGACATTTGAGAAAACATGCCGCCGAAGGAGCTCCGACACAAGTAACAACCGCCGCCTCCGCAATTTCTCAACCGGGTGTACTGCCAATACCAGCGGCCGCTGTACTCGTTGGGCATCCCCTCGCACCCCCGGCACCCCCCGTTGTACCGCAGCATACGGTCGTTGTCCCAACACCACCGGGAGTCCTTACTTCTTATTGA
Protein Sequence: MNSEQHTIPAASQAQQEANVASNTSQGQLGNAQQQASSSDVRVGTPAVALASSVAKYWVLTGLFPGPIPQVSVYHTQQQNSIGSQRSAELQNQNKEAVQAGTGSHQIAAVGGNLILRSDDTHRHHHQKSAINNSPTTTAITAATATTTNNSNNNNLGNGTVDTPLQSGPQIAVSLPGLNLDGTHIQASHLQAAHAQMQQQMQSQQQQLHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQTQQQAHHQMQSHQNPQNNVTNSQNQNAQRDENKVKDEGGSCTTERCSDNQVHCQVQCDLQLQQPQDLQQSIMQQQQQQQIGVSISGNAGGNDNGTATKPEKEKELRQLNMAQFQVPDLKPGGHMMDVRTADGSVVKISAGNEQDLAKTLGAEMVQNMYKVNVEDINQLLAYHEVFGKLQSEIAAGTTLVGGTVPTQTVTTIQNGTPIVQQVQLNKFDIKTSDGEATPGPSASPVSVGSHACEVCGKIFQFRYQLIVHRRYHTERKPFTSFSNANDLTRHGKCHLGGSMFTCAVCFHVFANAPSLERHMKRHATDKPYNCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQRTFTRKEHLNNHLRQHTGDSSHCCNVCNKPFTRKEHLVNHMRCHTGERPFVCTECGKSFPLKGNLLFHMRSHNKGSNAERPFRCDLCPKDFMCKGHLVSHRRSHSDERPHSCPDCGKTFVEKGNMLRHLRKHAAEGAPTQVTTAASAISQPGVLPIPAAAVLVGHPLAPPAPPVVPQHTVVVPTPPGVLTSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00266637; iTF_00798740; iTF_01306678; iTF_00265912;
90% Identity: iTF_00828955;
80% Identity: -