Basic Information

Insect: Ophion obscuratus
Gene Symbol: -
Assembly: GCA_964007375.1
Location: OZ023314.1:46178889-46204326[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0001 0.016 16.7 1.4 1 23 466 488 466 488 0.96

2 18 2e-05 0.0032 18.9 1.9 1 20 494 513 494 516 0.94

3 18 3.3e-05 0.0053 18.2 0.7 1 23 522 544 522 544 0.98

4 18 8.2e-05 0.013 17.0 4.4 1 21 550 570 550 572 0.95

5 18 2.5e-05 0.0041 18.6 4.6 1 23 578 600 578 600 0.99

6 18 2.5e-05 0.004 18.6 5.3 1 23 606 628 606 628 0.97

7 18 9.7e-06 0.0015 19.9 7.1 1 23 634 656 634 656 0.97

8 18 9.4e-08 1.5e-05 26.3 2.7 1 23 662 684 662 684 0.98

9 18 6.9e-05 0.011 17.2 6.7 1 23 690 712 690 712 0.97

10 18 2.2e-05 0.0034 18.8 5.8 1 23 718 740 718 740 0.98

11 18 5.7e-07 9.2e-05 23.8 2.9 1 23 746 768 746 768 0.98

12 18 8.5e-06 0.0014 20.1 7.8 1 23 774 796 774 796 0.98

13 18 2.7e-05 0.0043 18.5 9.1 1 23 802 824 802 824 0.98

14 18 3.5e-05 0.0056 18.2 7.5 1 23 830 852 830 852 0.98

15 18 0.00066 0.11 14.1 8.9 1 21 858 878 858 880 0.94

16 18 1.3e-05 0.0021 19.5 0.4 1 23 886 908 886 908 0.98

17 18 0.031 4.9 8.9 4.5 1 23 918 940 918 940 0.98

18 18 5e-07 8e-05 24.0 1.3 1 23 946 968 946 968 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0001	0.016	16.7	1.4	1	23	466	488	466	488	0.96
2	18	2e-05	0.0032	18.9	1.9	1	20	494	513	494	516	0.94
3	18	3.3e-05	0.0053	18.2	0.7	1	23	522	544	522	544	0.98
4	18	8.2e-05	0.013	17.0	4.4	1	21	550	570	550	572	0.95
5	18	2.5e-05	0.0041	18.6	4.6	1	23	578	600	578	600	0.99
6	18	2.5e-05	0.004	18.6	5.3	1	23	606	628	606	628	0.97
7	18	9.7e-06	0.0015	19.9	7.1	1	23	634	656	634	656	0.97
8	18	9.4e-08	1.5e-05	26.3	2.7	1	23	662	684	662	684	0.98
9	18	6.9e-05	0.011	17.2	6.7	1	23	690	712	690	712	0.97
10	18	2.2e-05	0.0034	18.8	5.8	1	23	718	740	718	740	0.98
11	18	5.7e-07	9.2e-05	23.8	2.9	1	23	746	768	746	768	0.98
12	18	8.5e-06	0.0014	20.1	7.8	1	23	774	796	774	796	0.98
13	18	2.7e-05	0.0043	18.5	9.1	1	23	802	824	802	824	0.98
14	18	3.5e-05	0.0056	18.2	7.5	1	23	830	852	830	852	0.98
15	18	0.00066	0.11	14.1	8.9	1	21	858	878	858	880	0.94
16	18	1.3e-05	0.0021	19.5	0.4	1	23	886	908	886	908	0.98
17	18	0.031	4.9	8.9	4.5	1	23	918	940	918	940	0.98
18	18	5e-07	8e-05	24.0	1.3	1	23	946	968	946	968	0.97

Sequence Information

Coding Sequence: ATGAATAGCGAACAGCACGCTCTGCCAGCCACTACGCAGGCGCAGCAAGAGGGTGGAAATTTGGCTAGTTCTACGAGTCAAGGACAAGTAGGAAGCACGCAGCAACCTTCTTCGCCAGATCTGCGTGTAGGTACAGCAGTAGCGTTAGCATCCTCGGTAGCTAAGTATTGGGTCCTGACCAATCTCTTTCCTGGACCGATACCCCAGGTTTCGGTCTATCATAACTCGCAAAATACCACATCGTCCTCGAGGGACACATCTGCCACAACTGCCGTCGGTGATACACAATCTCAAAGCAAGGAAACAGCTGTTGCTCCGATGTCCCATGCAATGGCTATTACCTCTGGTGCTCAGCATCAGGCCAATGCTTCTCATCAGCATCATCAAAATTCGGTAAACAACGTGGGAACGAATGGCAATACAAGCAACATCGTTCATGGCTCGTTGCACTCGGGCTCGCAGATTCCAGTCTCGCTGCCGGGCCTGAATCTCGACGGGACGCACATACAAGCGAGTCATTTGCAGGCTGCACACGCCCAGATGCAGCAGCAGATGCAGTCCCAGCAGCAACAGCTGcatcagcagcagcaacagcagcagcagcagcagcaacaacaacaacaacaacaacaacaacaacaacagcagcagcagcaacaacaacaacaacaacaacaacaacagtcgCAACAGCAGGCCCATCATCAAATGCAAAGTCATCAGAACCCAAACAAtgtgacaaacgcgcaaaatcAGAACGCCCAGCGCGATGAGAACAAAGTGAAGGACGAGGGTGGCAGTTGCACCACCGAGCGATGCGGCGATAATCAGGTCCACTGTCAAGTACAGTGCGACCTCCAGCTCCAACAGCCACAAGATTTGCAACAGAGCATGatgcagcagcaacagcagcagcaacaaattGGCGTCAGTATAAGCGGAAACGCCGGCAACGACAATGGGAACGCGGTCAAATCGGAGAAGGACAAGGAGTTGCGCCAACTCAACATGGCACAATTTCAAGTCCCGGACCTGAAGCCCGGTGGTCACATGATGGACGTGAGAACCGCCGATGGTTCGGTTGTCAAGATCAGCGCGGGCAACGAGCAAGATCTCGCTAAGACCCTCGGCGTCGAAATGGTCCAGAACATGTACAAAGTCAACGTCGAGGATATCAATCAACTTCTGGCTTATCACGAGGTATTTGGCAAGCTACAGAGCGAGATCGCGGCCGGTACTACACTAGTCGGTGGCACAGTACCGACCCAGACCGTCACCACGATACAGAACGGCACGCCGATAGTTCAGCAAGTACAGCTGAACAAATTCGACATAAAAACGAGCGACGGCGAGGCAACACCCGGACCGAGCGCTTCACCCGTGTCCGTTGGTAGCCACGCTTGCGAAGTTTGCGGCAAGATATTTCAATTTCGCTATCAACTAATCGTACATCGCAGATATCACACCGAGCGCAAACCCTTCACGTGTCAGGTATGCGGCAAAGCATTTTCAAACGCGAATGATCTGACGCGCCACGGCAAATGTCACCTCGGCGGCTCTATGTTCACTTGCGCCGTGTGCTTTCACGTGTTCGCGAACGCTCCGTCCCTCGAGCGTCACATGAAACGCCACGCTACGGACAAACCCTACAATTGTACCGTGTGTGGCAAGAGTTTTGCTCGAAAAGAGCATCTCGACAATCACACGCGTTGTCACACCGGCGAAACGCCGTACAGGTGTCAATATTGCGCCAAGACGTTCACGCGCAAGGAGCATATGGTCAATCATGTGCGTAAACACACCGGCGAGACTCCCCATCGTTGCGACATATGCAAGAAGAGCTTCACGCGAAAGGAACACTTCATGAATCACGTTATGTGGCACACCGGCGAGACACCGCATCACTGTCAGGTCTGCGGTAAAAAATACACACGCAAGGAGCATCTGGCCAATCATATGCGTTCGCACACCAATGATACGCCTTTCCGCTGTGAAATTTGCGGCAAGTCGTTTACGAGGAAGGAGCACTTCACGAATCATATAATGTGGCACACTGGTGAGACGCCGCATCGCTGCGACTTCTGCTCGAAGACGTTCACGCGAAAGGAGCATCTACTAAACCACGTACGCCAGCACACGGGTGAGTCACCACACCGATGCGGCTTCTGCTCCAAATCGTTCACCAGAAAGGAACACCTTGTTAACCACATCCGCCAACACACAGGTGAAACACCCTTCCGCTGTCAATACTGTCCGAAAGCGTTTACGCGGAAGGACCACCTGGTTAACCACGTCAGGCAGCACACGGGTGAGTCACCGCACAAGTGCCAGTATTGCACCAAATCCTTCACGCGGAAGGAACATTTGACAAATCACGTGCGTCAACACACAGGCGAATCGCCACACCGATGTCACTTCTGCTCCAAGTCATTTACCCGAAAGGAGCACTTGACGAATCACGTGAGAATCCACACCGGCGAATCGCCGCACAGGTGTGAATTCTGTCAGAGGACCTTCACCAGGAAGGAACACCTCAATAATCATCTCCGTCAGCACACTGGAGATTCATCGCATTGTTGCAATGTCTGCAACAAACCGTTCACGAGAAAGGAACATCTCGTTAATCATATGAGATGTCACACGGGCGAGCGTCCTTTCGTGTGTACCGAGTGCGGCAAAAGTTTCCCCCTGAAGGGCAATCTTCTCTTTCACATGCGTTCACACAACAAGGGCAGCACCGCCGAGCGACCCTTCAGGTGCGATCTATGCCCAAAGGACTTCATGTGCAAGGGTCATCTAGTGTCGCATCGGCGTTCGCACTCGGACGAGAGACCGCACAGTTGTCCCGATTGTGGAAAAACGTTCGTGGAGAAGGGCAACATGTTGCGACACTTGAGGAAGCACGCGGCCGAAGGTGCACCGACCCAGGTTACAACGGCATCGTCGATCCCTCAGCCGGGTGTGTTACCGATCCCGGCGGCCGCTGTCCTCGTTGGGCATCCGCTCGCGCCACCAGCACCACCCGTTGTGCCGCAACACACCGTTGTCGTACCAACGCCACCGGGAGTTCTCGCCTCGTATTGA
Protein Sequence: MNSEQHALPATTQAQQEGGNLASSTSQGQVGSTQQPSSPDLRVGTAVALASSVAKYWVLTNLFPGPIPQVSVYHNSQNTTSSSRDTSATTAVGDTQSQSKETAVAPMSHAMAITSGAQHQANASHQHHQNSVNNVGTNGNTSNIVHGSLHSGSQIPVSLPGLNLDGTHIQASHLQAAHAQMQQQMQSQQQQLHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSQQQAHHQMQSHQNPNNVTNAQNQNAQRDENKVKDEGGSCTTERCGDNQVHCQVQCDLQLQQPQDLQQSMMQQQQQQQQIGVSISGNAGNDNGNAVKSEKDKELRQLNMAQFQVPDLKPGGHMMDVRTADGSVVKISAGNEQDLAKTLGVEMVQNMYKVNVEDINQLLAYHEVFGKLQSEIAAGTTLVGGTVPTQTVTTIQNGTPIVQQVQLNKFDIKTSDGEATPGPSASPVSVGSHACEVCGKIFQFRYQLIVHRRYHTERKPFTCQVCGKAFSNANDLTRHGKCHLGGSMFTCAVCFHVFANAPSLERHMKRHATDKPYNCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLVNHIRQHTGETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQRTFTRKEHLNNHLRQHTGDSSHCCNVCNKPFTRKEHLVNHMRCHTGERPFVCTECGKSFPLKGNLLFHMRSHNKGSTAERPFRCDLCPKDFMCKGHLVSHRRSHSDERPHSCPDCGKTFVEKGNMLRHLRKHAAEGAPTQVTTASSIPQPGVLPIPAAAVLVGHPLAPPAPPVVPQHTVVVPTPPGVLASY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00899003;
90% Identity: iTF_00828955;
80% Identity: -