Basic Information

Insect: Herminia tarsipennalis
Gene Symbol: -
Assembly: GCA_945859575.2
Location: OX243841.1:22404744-22413658[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 3.5 3.6e+02 3.0 0.9 1 23 55 78 55 78 0.94

2 19 0.045 4.7 8.9 4.4 1 23 85 108 85 108 0.97

3 19 0.0019 0.2 13.2 1.0 2 23 223 244 222 244 0.97

4 19 7.3 7.7e+02 1.9 3.1 1 23 250 272 250 273 0.94

5 19 0.23 24 6.7 3.4 2 22 505 525 504 525 0.95

6 19 0.094 9.8 7.9 2.6 1 23 623 645 623 645 0.95

7 19 2.1 2.2e+02 3.6 0.3 2 23 783 804 782 804 0.95

8 19 0.0012 0.13 13.8 0.5 2 23 881 902 880 902 0.96

9 19 0.028 2.9 9.6 0.8 1 23 910 932 910 932 0.97

10 19 0.17 18 7.1 3.2 1 23 966 988 966 988 0.95

11 19 0.00026 0.028 15.9 4.0 1 23 996 1018 996 1018 0.99

12 19 0.11 12 7.6 1.9 1 23 1103 1125 1103 1125 0.99

13 19 0.082 8.5 8.1 4.8 1 23 1180 1202 1180 1202 0.95

14 19 0.014 1.5 10.4 2.0 1 23 1291 1313 1291 1313 0.96

15 19 0.038 4 9.1 1.4 1 23 1319 1341 1319 1341 0.95

16 19 0.0074 0.77 11.4 2.6 1 23 1431 1453 1431 1453 0.97

17 19 0.00018 0.019 16.4 1.4 1 23 1459 1481 1459 1481 0.99

18 19 0.36 38 6.0 2.9 1 23 1572 1594 1572 1594 0.96

19 19 0.01 1 11.0 2.6 1 23 1605 1627 1605 1627 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	3.5	3.6e+02	3.0	0.9	1	23	55	78	55	78	0.94
2	19	0.045	4.7	8.9	4.4	1	23	85	108	85	108	0.97
3	19	0.0019	0.2	13.2	1.0	2	23	223	244	222	244	0.97
4	19	7.3	7.7e+02	1.9	3.1	1	23	250	272	250	273	0.94
5	19	0.23	24	6.7	3.4	2	22	505	525	504	525	0.95
6	19	0.094	9.8	7.9	2.6	1	23	623	645	623	645	0.95
7	19	2.1	2.2e+02	3.6	0.3	2	23	783	804	782	804	0.95
8	19	0.0012	0.13	13.8	0.5	2	23	881	902	880	902	0.96
9	19	0.028	2.9	9.6	0.8	1	23	910	932	910	932	0.97
10	19	0.17	18	7.1	3.2	1	23	966	988	966	988	0.95
11	19	0.00026	0.028	15.9	4.0	1	23	996	1018	996	1018	0.99
12	19	0.11	12	7.6	1.9	1	23	1103	1125	1103	1125	0.99
13	19	0.082	8.5	8.1	4.8	1	23	1180	1202	1180	1202	0.95
14	19	0.014	1.5	10.4	2.0	1	23	1291	1313	1291	1313	0.96
15	19	0.038	4	9.1	1.4	1	23	1319	1341	1319	1341	0.95
16	19	0.0074	0.77	11.4	2.6	1	23	1431	1453	1431	1453	0.97
17	19	0.00018	0.019	16.4	1.4	1	23	1459	1481	1459	1481	0.99
18	19	0.36	38	6.0	2.9	1	23	1572	1594	1572	1594	0.96
19	19	0.01	1	11.0	2.6	1	23	1605	1627	1605	1627	0.97

Sequence Information

Coding Sequence: ATGCTACAGCAGATGTCCTCGCCGCCGACCGGACAAGGCGCCGAGGTCGCGACTCTCTTCGGCCGGTACCTTGAGGGCCGCCTCTGTGGCGACGTCTCCTCGGAGGCCTCCTCCGATGCCGCGGAAGATAACGAGTTACCACAGTGCAAGATAAAGAGGAACTATAATTGCACAAAGTGCACGTTCTATACACAGAACCCGCGCGCTTATCTCGTCCACACGCGTGACGCTCATTTCGTTAAACTCAAAATATTTGATTGTCCACACTGTGTTTACGCGTCAAAACATCATCAGAAACTTATACGACATATTAAAATGGTTCACGAAGAAGCTGAGACACGGGGTTCCAAGTCGTCATCGAAGTTGGATGTTGAATTATCGACCCCCATACATGATGAGCAACCTATGAGGATAGAAGACTTGCTGGAAGAAGTAGAAGAATGCGATGACATGATGATGGAAGTTGAGGACTGTCCCGATTACTCCATGGAGCACGCTGACGACATCGACGTCGTGGGCGAAATAACAGCAGAACAAGCAGCGCCCTCAAACTTATCAAAAACAAAAAGCAACGTCAAATTCTTTACATGTGACAAGTGTACGTACGTTACCCACATAAGGGCTAGATTCACTAAACACGTCAAGTACCATTCAATGCCTATGATAAAGTGTACAATGTGCGATTTTCGGACACCATACAAGTGGAACTTGGACCGTCACATGAAGAACCACGGTGGAACTGGAAGTTTTCATTGTTCGATGTGCAACTTCACTGCGGACATCAAGCAGAGTCTGACGGTGCACGAAATGAATCATCACACACCGCCGGTGGGCCAATCGCTGGCGAGTCGCCGTCGCAATCGGGTGGGTGCCAGCGACACGGTGACCGCGGAGTACGACGCGGCGAACGCGGCGCTCCCCAAGGAGGACGAAGGGAGCGGCGACTCGCGGTCCTCACACTCGGTCTCGGACATGGGCCTACAATACGCAGAAAGAGACATAGTCAGCTGTAAAAGCGACTCCAATGACGGCTCTCCCTCCGACATTATTGGAAGAAAAGACCAAGGCTCACCAAACAACAGTTCAGATGAGTCTAAACATAAACAGAGCAGAAAAATTCCTCGACCAATACCACAACTCATACCGCTAAATTCATCAACGCCCAATCAAAAGCAATCTGGTGAACCACCACACAAGAAATTCAAAGAAGATCATGTAGATTTAACTGAGGATTTGGAAAACAAAATCGAAAGTTTGTCAGCTGATATTACGTTAATTCCTGTCAACAGCAACCCATCAAAGGAAACTGGAGGTCGTAAGAAGAATGAATCATTTTTCGACAGACTAAAGGAAAGACTACTAACAGAAACAGGCGAAGAAGGTTCTCTTATATGCAAAAATTGTGGATTCGAAAGCAAATGTTTATCTGAACACTCAGTGCATGAGAAGAATTGCACCCCACAAGCTAACAAGGTCAATACAAATACAGCACATTCCAGTTTAAGTTCAACACGATGTCAAAATTGCAGACACCGATGTAAATCAAGTGCCGATTTGTATATTCACATGCAGACTTGCGGTAAAAGTGCAAAAGTTGAGAATGAAGGTGCCAATCAAAATAAAAATGAAGATAGTAATGATGCTTCCATTCCAAATCAAGAGAAAGAACTCGAAAGGCATCCTATGGAGAACGTCGTTTTCGTATGGAACAATATTGATCAAGACAGTAATAAATTTGAACCTTTGGATATTAATATAAACGACGATTCAACTCTCCCTGAAATGAACCGGAGTTTTGATGTTGAAATTGTTGATGAGAATGAAACTATGAATTTATCACCAAGTCAAGCTGTAGGTAAAAAAGTATTTAAATGCCCACATTGTCCATTTTTCTCAACCACCGCATCGAGATTCCACGTCCACATTGTAGGTCATTTAAACAAGAAGCCATTTGAATGTTCACTTTGCAAATACAAATCGAATTGGCGATGGGATATCACAAAACACATCAAGCTGAAGTCAGCTAGAGATCCCGAGCACAATGACGCAAAGGTCCTAATGACTGATGAGACTGGCAGACGAAATTATAGCAAGTATAACAAATTCTTGGCAATGCCCGTATTAAACGAGTATGGAGAAAATGAGTTCCATTATTTAGACACCAGTGCATCGCTGGACGGAAGCATGGAAATTGATGATTCGTTCCATGATATGTCCGATGTTATACACTCACAATATGAGATACAACCTCTAAACTTGCAGACGCAACACGGCGATGATAAATATGACTTTGATGGAAGAGGTCTGAATATGAATGATTTGAAGAAACCTAAGAAAACGATGTGGAAATGTAAAAGATGCAATTACAAAGACCCCTCAAAGGAAGCCCTATTGGAACATGTTCGCGAGCATTCCAAAGAAGGCGCCCCAGAGGAGCCGCATAAACCTCCTGTTGCGAAGAAATCTGAGAATACTCCTGATCCAGCAGACTTGGCGTATCGTTGTGGTCACTGTCACCAACTGTCTAATTGGAAACATGTGATACAGCGCCACTGCCGTTTGAAGCACGATGGCGTTATAAAAGTTATAACCACAGTGAAACCGAAACCAGATCCTGTGAGCATTAATGACATCAACGACACATGCAACAAATGCCCCTACAGAACAAGTGACAAAAAGTTACTTATCGCCCATCTACAACAACATCAACCGTCGCCCCAATCAATATTCAAATGCTACTTCTGCCCCTACTTCGTAAAAGATGAACAAGAACTAAACCAACACCTTCTTCTGCACGGGATTACTGAACCTGAAGATTATATCTCCAAAAACATGGACCAGAAGTCTCCACTACGAGAACAACAAACAACATCATCGGTTTGTTCCACCAAACGTCATAGGTGTACTGAATGCCCCTATGAAACAAACAGCAAGTCCCAATACATGTACCACGAACAGTTCCATCGCACTCCGGCAGACACCCCGTATAAATGTCCAGAATGCAACTACAGTGTGTCTAAAAGACATTTACTGCACCAACATTTGAGAGTTCACGGCATAATCACAAAAAGACTTGACGCAGAATATGGTTTAGACCAGCCTTCAACATCGTCGCATAAAGATGGTAAAGCCGACTCACAGACGAACTTCTCTGAAGAAATTCCATTCGTATGGGTGTCTGCCAAAAATGAGTTTCATAAAATGTTCAAGTGCCGATATTGTTCATATGTTAATTCTCAGAAATGCAAAATTCCAAACCACGAGAAAATTCATTGTATAGTTTTTGAAAATAGTGATACAACTATTTATAAGTGTCTTGAGTGTAAATTTACTTGTGACAACGCTGGCAGACTAGCAGAGCATTCCAAAACACATGGTGAAATATACGGCCGTATTTACTGTCCAGTTGAAGAAGATATACCAGATGAGGAACAAATTGCAAAATTACGAAAAGTTATAGAAATAGAAAAGAATAGCAATTCCGAAAACTTTAAAGAAGAAGGAGCGCCAAACGAGACCAGAGAGATTAAGTTATTATATTTTTGTCACAAGTGTCCGGCTAGATTTTGCGACGATAGTGAATTAGAAAGTCACAATAAATTCCATGATGACACATATTCCAATAAATGCAAAAGTTGCAAGTTTTCGGCGCCTGAAGAAAGTGAAATAGCAACTCACGCAACAGTGCACACAGATGAATATAACACTAAAACAAAGATGCTTAAATTCATCCACAATTCGCATCCTTCTCATAAAGCCCCCCGATTGGAATTGACACAATGTCCAACTAGTTCGGAAATCATATGGATATCAGCAGGACCAATGCCGGAGACCACTGAAACTATTGTGAAAAAACATGTGCCAAAACAGTATTGCTGTAAACTATGTCCAGCTAAGTTTTTCAAAAGTTCAGCACTAAGCTATCACATGGCATTACATGGAGGAGATGGTGACCATAAGTGCAGGAAATGCAGTTATACTGTGAAAAATGTAGGTAACTTGGCTAAACATGAAATATTACATGAAAAAGAAAATAACCAATCAAATTGTGATTATGAGTCTGGCGATGACATGGATTTCAAGAACATCCCGTTATCAGGCACAGATTTGTTCCAGAGAAAGACTGAGGCTCAAAAAAGAGTGTTAACTGATAAAGATAAATTAGTTAAGCCAAATGATCACTTTCCGCCTGTGTTACAAGCTGACCCACAGTTTGGATATTTAATGCATGGTAATCCTGAATTTATTTATCCAACTTACCTAAAAAATGGGCGTCAAAAAGAAAAGCGATACAAGTGTCATAAGTGTCCTTCAGCATTTGAGAAACGAGAGCAATATAAAATCCATTTATCATTACACGGATCTAAACAAAGGTACAAATGCGAATTATGTGATTATTCAGTAAAATATTACGCAAACTATGTGCAGCACATGAGGAAACATCAGATGAACGATGAAGCGCAAGCGGAGCGTAAAAAAGGTGATAACGGTTTTCTCATACCTGAAAACCAAGACGTGAAACAAGAGGACAAGACGGATAATATTAAACTTGCAATCAAAACTATGCCTAAAGGACCTCCGAAAAGTGATTTCCAGCAATTTTCAATAAGTGACCAACAGACACTTAGATTGCTACAGCGAAGACGATCAATGAACAACTGTGGAAAGGATCTCAATTCAACAGAAACCTCGCCGACGAAAGAGCGCAAAATGCACATGTGTTTATTGTGCCCTTATACAAATCAACGTCAAGATTCCTTGACTAACCACTATAGGAGGCACGGAGATAACGATGTCCTCTCTACAGCCAGTCATAAATGTTCTTATTGTGATCTTGTGGTTGTTCAATCACATTTTCTCAGGGAACATTTGAAAGGACACTTCAATTACCATAAAACACTAACAGCCGAATGTTTCGTGGCGAATGATGACGTTAGTTTTACTGTAACTAAGTTAGAAGATGAAGGTAGTGAACCAGTTGATCTCAAATTAGATGTGAAAAACAAAATATTCGCGTGTAAAGACGACAAAATATATGTTAAAATAGCGACAGGCGAACTGTTGGCTGCTTGGGAGGAGTAA
Protein Sequence: MLQQMSSPPTGQGAEVATLFGRYLEGRLCGDVSSEASSDAAEDNELPQCKIKRNYNCTKCTFYTQNPRAYLVHTRDAHFVKLKIFDCPHCVYASKHHQKLIRHIKMVHEEAETRGSKSSSKLDVELSTPIHDEQPMRIEDLLEEVEECDDMMMEVEDCPDYSMEHADDIDVVGEITAEQAAPSNLSKTKSNVKFFTCDKCTYVTHIRARFTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGTGSFHCSMCNFTADIKQSLTVHEMNHHTPPVGQSLASRRRNRVGASDTVTAEYDAANAALPKEDEGSGDSRSSHSVSDMGLQYAERDIVSCKSDSNDGSPSDIIGRKDQGSPNNSSDESKHKQSRKIPRPIPQLIPLNSSTPNQKQSGEPPHKKFKEDHVDLTEDLENKIESLSADITLIPVNSNPSKETGGRKKNESFFDRLKERLLTETGEEGSLICKNCGFESKCLSEHSVHEKNCTPQANKVNTNTAHSSLSSTRCQNCRHRCKSSADLYIHMQTCGKSAKVENEGANQNKNEDSNDASIPNQEKELERHPMENVVFVWNNIDQDSNKFEPLDININDDSTLPEMNRSFDVEIVDENETMNLSPSQAVGKKVFKCPHCPFFSTTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNDAKVLMTDETGRRNYSKYNKFLAMPVLNEYGENEFHYLDTSASLDGSMEIDDSFHDMSDVIHSQYEIQPLNLQTQHGDDKYDFDGRGLNMNDLKKPKKTMWKCKRCNYKDPSKEALLEHVREHSKEGAPEEPHKPPVAKKSENTPDPADLAYRCGHCHQLSNWKHVIQRHCRLKHDGVIKVITTVKPKPDPVSINDINDTCNKCPYRTSDKKLLIAHLQQHQPSPQSIFKCYFCPYFVKDEQELNQHLLLHGITEPEDYISKNMDQKSPLREQQTTSSVCSTKRHRCTECPYETNSKSQYMYHEQFHRTPADTPYKCPECNYSVSKRHLLHQHLRVHGIITKRLDAEYGLDQPSTSSHKDGKADSQTNFSEEIPFVWVSAKNEFHKMFKCRYCSYVNSQKCKIPNHEKIHCIVFENSDTTIYKCLECKFTCDNAGRLAEHSKTHGEIYGRIYCPVEEDIPDEEQIAKLRKVIEIEKNSNSENFKEEGAPNETREIKLLYFCHKCPARFCDDSELESHNKFHDDTYSNKCKSCKFSAPEESEIATHATVHTDEYNTKTKMLKFIHNSHPSHKAPRLELTQCPTSSEIIWISAGPMPETTETIVKKHVPKQYCCKLCPAKFFKSSALSYHMALHGGDGDHKCRKCSYTVKNVGNLAKHEILHEKENNQSNCDYESGDDMDFKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKGDNGFLIPENQDVKQEDKTDNIKLAIKTMPKGPPKSDFQQFSISDQQTLRLLQRRRSMNNCGKDLNSTETSPTKERKMHMCLLCPYTNQRQDSLTNHYRRHGDNDVLSTASHKCSYCDLVVVQSHFLREHLKGHFNYHKTLTAECFVANDDVSFTVTKLEDEGSEPVDLKLDVKNKIFACKDDKIYVKIATGELLAAWEE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00282926; iTF_00281859; iTF_00678106; iTF_01502564; iTF_00638257; iTF_00405553; iTF_00824310; iTF_00442003; iTF_01361154; iTF_00823498; iTF_01198261; iTF_00157655; iTF_00707452; iTF_00909371; iTF_00637026; iTF_01167211;
90% Identity: -
80% Identity: -