Hcun012213.1
Basic Information
- Insect
- Hyphantria cunea
- Gene Symbol
- IKZF1
- Assembly
- GCA_003709505.1
- Location
- PKRV01000652.1:1416074-1427791[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 2 1.3e+02 3.4 1.0 1 23 55 78 55 78 0.95 2 21 0.037 2.3 8.9 4.4 1 23 85 108 85 108 0.97 3 21 9 5.6e+02 1.4 4.3 1 23 197 219 197 219 0.97 4 21 0.0016 0.097 13.2 1.0 2 23 225 246 224 246 0.97 5 21 6.1 3.8e+02 1.9 3.1 1 23 252 274 252 275 0.94 6 21 0.16 9.8 6.9 3.8 2 22 511 531 510 531 0.96 7 21 0.078 4.9 7.9 2.6 1 23 630 652 630 652 0.95 8 21 0.54 34 5.2 0.3 2 23 791 812 790 812 0.96 9 21 0.011 0.67 10.6 0.6 2 23 889 910 888 910 0.96 10 21 0.024 1.5 9.5 0.6 1 23 918 940 918 940 0.98 11 21 0.14 8.8 7.1 3.2 1 23 974 996 974 996 0.95 12 21 0.00022 0.014 15.9 4.0 1 23 1004 1026 1004 1026 0.99 13 21 0.068 4.3 8.1 3.0 1 23 1112 1134 1112 1134 0.98 14 21 1.9 1.2e+02 3.5 2.3 1 23 1187 1209 1187 1209 0.92 15 21 6.9 4.3e+02 1.8 0.1 2 23 1216 1237 1216 1237 0.94 16 21 0.031 1.9 9.1 0.5 1 23 1304 1326 1304 1326 0.94 17 21 0.0089 0.56 10.8 0.7 1 23 1332 1354 1332 1354 0.95 18 21 0.0061 0.38 11.4 2.6 1 23 1444 1466 1444 1466 0.97 19 21 0.00015 0.0095 16.4 1.4 1 23 1472 1494 1472 1494 0.99 20 21 0.3 19 6.0 2.9 1 23 1585 1607 1585 1607 0.96 21 21 0.0026 0.16 12.5 3.7 1 23 1618 1640 1618 1640 0.98
Sequence Information
- Coding Sequence
- ATGCTACAGCAGATGTCCTCGCCGCCGAGCGCACAAGTCGGCGAGGTCGCGACTCTCTTCGGGCGCTACCTTGAAGGCCGTGCCGGTGGAGACGTCTCTTCAGAAGCCTCCTCTGACGCCGCTGAAGATTTAGAGTTACCACAGTGTAAAATAAGAAGGAACTATAATTGCACAAAGTGCACTTTTTATACGCAGAACCCACGGGCCTTTCTCGTTCACACGCGAGACGCTCACTTtgtgaaattgaaaattttcgaTTGTCCACATTGTGTTTACGCATCCAAACATCACCAAAAACTTATAAGACACATAAAAATGGTTCACGAAGAAGTTGTAACACGAACTCCAAAGTCTAATTCATCAGCGAAATTAGATGTTGAGGTACCCAACTCCACACACGATGATCAATGTATGCGTATAGAAGATATGTTAGAAGAAGTCGAAGACTGTGAAGATATGATGATAGAAGTTGAAGAAGGACCCGACTACTCAATGGAACAAGTGGACGACATCGACGCCGTCGACGACTTAACCACAGAACATGCAGCGCCCTCAAAcctattaaaaacaaagaataacGTTAAGTTTTTCACATGTGATAAGTGCACCTATGTTACCCACATAAGAGCTAGATTTACTAAACACGTCAAATATCACTCTATGCCTATGATCAAGTGTACTATGTGTGACTTCCGGACACCGTATAAGTGGAACTTAGACCGGCACATGAAGAACCATGGTGGGAGCGGAAGTTTTCATTGCTCCATGTGCAACTTTACTGCAGACATCAAGCAGAGTCTGACGGTTCACGAAATGAATCATCACACACCGCCAGCGGGTCAATCGCTGTCGGGTCGTCGACGCAACCGGGTGGGTGCCAGCGACACAGTTATCGCCGAGCACGACGCAGCGAATGTGGCGCTCCCCAAGGATGAAGAAGGGAGCGGCGACTCGCGGTCCTCACACTCGGTCTCGGAAATGGGTCTACAATACGCTGACAGAGAAATAGTTAGCTGCAAAAGCGACTCTAATGATGGTTCGCCCCCAGACGCTTCGGAAAAAAGGGACAGTCAAAGTTCACCCAACCATAGTTCAGATGagtctaaacaaaaaaataacagaaaaattcCACGACCAATACCGCAACTCATACCATTAAATTCCTCAGCACCCAATCAGAAGCAAACAAATACCGGTGAGCCACCACAAAAGAAATTCAAGGAATCATCACCCGTGGACTTAACTGACACGAAATctgataaaatagaaaatttgcCTACTGATATATCTTTATTTCCGATCAATAATTCATTAAGTAAAGAGGTCGGTGGACGCAAGAAAAATGAATCCTTCTTTGATAGACTTAAGGAGCGGCTGCTTGCTGAAACTGGAGAAGAAGGTTCTCTTGTATGCAAAAATTGTGGATTTGAAAGTAAATGTTTATCAGAACATTCAGTGCACGAGAAAAATTGCTCACCACAAGCTAATCGAACGACTGCAAATGCATCGCATTCAAGTTTAAGTTCTACACGATGTCAAAATTGCAGACATAGATGTAAGTCGAGTGCAGACTTATATGTTCACATGAAAACGTGCGCTAAAAATTACAGAGTTGAAAACgataatatttgcaaaaataaaaacgagGACAGCAAtgacactactactactaatcaAGAGAAGGAGTTAGAGCGCCATCCCATGGAAAATGTTGTCTTCGTTTGGAACAATATTGATCAAGATACCAACAAATTTGACACTCCTTTAGGTATCAATATAAACGACGACTCTACTTTACCGGGACCAAACCGGAGCTTTGATGTAGAGATTATCGACGAAAATGAGAGTATGAATTTATCACCAAGTCAAGCAGTCGGGAGAAAAGTATTTAAGTGTCCTCACTGTCCATTCTTCTCCACAACCGCGTCGAGATTTCATGTCCATATTGTTGGCCACTTGAACAAAAAGCCCTTCGAATGttctttatgtaaatataaatcaaactGGAGGTGGGATATTACGAAACATATAAAACTCAAGTCTGCAAGAGACCCGGAACACAACGATGCTAAGGTATTAATGACCGATGAGACAGGGAGAAGGAATTATAGCAAGTATAACAAATTCTTGGCAATGCCAGTATTGAACGAGTATGGAGAAAATGAGTTCCACTATTTGGATTGTAACACATCGATAGATGGATCCATGGAAATTGATGATTCATTCCATGACATGTCAGATGTTATGAGTGAGCATTACGAAATGCAACCACTGAATCTGCAAACTCAGTACGGTGACGAGAAGTATGATTTGCTTGATAGCAGAGGTCTAAGTTTCAATGATATGAAGAAACCGAAGAAAACTCTGTGGAAATGTAAGAAATGTAATTACAAGGATCCGTCAAAAGAAGCTCTATTGGAACACGTTCGTGAACATTCTAAGGACGGAATACAAGAAGAACCGCTGAAATCTGCCGGCTCTAAGAAATCTGAAAACACTCCCGATCCAGCTGACTTGGCCTATCGTTGTGGCCACTGTCACCAACTCTCCAATTGGAAACATGTTATACAGAGACACTGCCGTTTGAAGCATGATGGTGTCATAAAAGTTATAACAACAGTGAAGCCAAAACCAGACCCCGTGAGCATAAATGACATTAACGACACCTGTAATAAATGTCCCTTCAGATCAAACGATAAAAAACTGCTTATTGCCCATCTGCAACAACATCAACCATCACCGCAATCagtatttaaatgttacttCTGTCCTTACTTTGTCAAAGATGAAAACGAGCTGTCGCAACATTTGCTTGTACATGGCATCACGGAGCCTGAAGATTATATTTCAAAAGCTATGGAAGAAAAATCACCTTTACAAGAACAGCAATTGAATCCCTCATCGTGTTCAACAAAACGTCATAGATGTACAGAATGCCCATATGAAACAAATAGCAAGTCCCAATATATGTACCATGAACAATTTCACCGTACACCATCCGACACACCATACAAATGTCCAGAGTGCAACTACAGTGTGTCCAAGAGACATCTATTGCACCAACATTTAAGAGTTCACggaataataacaaaaaggtTGGATGTGGAATATGGTTTAGATCAACCATCAACATCGCAGAACAAAAATGATGGTAAAATCGATTCTGAAGGcatattttatgaagaaattcCATATGTATGGGTGTCTGCTAAGAACGAGTTCCATAAAATGTACAAATGTCGATATTGTTCATACGTCAATTCCATTCAATGCAAAATTCCAAATCACGAAAATCTCcatttcattgtttttgaaaataatgacaCAACGATTTACAAGTGTCTGGAATGCAAATTTACTTGCAACAATGCTAGTAGGCTTGCAGAGCATTCTAAAAGCCATGGAGAAATATATGGTCGGATTTACTGTCCTGTTGAAAATGACAGTCCTGATGAGCAGCAAATTGCAAAGTTAAGAAAAGTTATTGAAATGGATAAAGGCACAGAAAACTTTTCTAAAGAAGAAGGCGTAACTGAGAGCAGAGAGATCAAAATGTTATACTTCTGTCACATGTGTCCAGCTAGGTTTTTTGAAGATACTGAATTAGAAAGTCACAAAACATTCCATAATGCCACATTGCCAAATAAATGTACTAGCTGTGAGTATTCGGTATCTGAAGGAAATGATTTAGCAGCTCACGAAACAGTGCACACAGATGAATAtcacacaaaaactaaaattctaaaatttcttCATAATTTACATCCAACTCACAGGCAGCCTCAGTTGGCAATGGCACCTGATTCTACCGATTCCGAAATCAAATGGATATCTATCGGTCCACCAAAGGCTGAAAACGTtgaaagtaatgtaaaaaaatcgcATGATACAAAACATGTGCCAAAGCAATACTTTTGTAAGCTATGCCCTGCAAAATTCTTTAAAAGTTCAGCTCTAAACTATCATGCAGCATTACATGGAGGAGATGGTGACCATAAATGCAAGACATGTAATTATGCTGTTAAAAACATAGGCAACCTTGCTAAACATGAGATTttacatgaaaagaaaaataaacccTCAAATTGTGACTATGAGTCTGGTGAAGATATGGATTATAAGAATGTTCCATTATCAGGCACAGATTTGTTCCAGAGAAAGACTGAAGCTCAGAAAAGAGTGTTAATAGACAAAGATAAATTAGTTAAGCCAAATGATCATTTTCCGCCTGTCTTACAAGCCGACCCGCAATTCGGGTACTTGATGCACGGTAATCCTGAATTTATATATCCCACTTATCTGAAAAATGGCCGACAAAAAGAAAAGCGTTATAAGTGTCATAAATGTCCCTCAGCATTTGAGAAACGAgaacaatataaaattcatcTTTCGTTGCATGGTTCCAAGCAAAGATATAAATGTGAGTTATGTGATTATTCCGTGAAATATTATGCTAATTACGTGCAACATATGAGGAAACATCAAATGAACGATGAGGCGCAAGcagaaagaaagaaaggtaACAATGGTTTTGTTATGGCTGAAAACCAAGACTTGAACAAAGATGAAAGCACTGATAATATTAAGCTTGCAATTAAAACTATGCCAAAGGGACCTCCGAAAAGCGATTTCCAACAATTCTCTATAAGTGACCAACAAACTCTTCGACTGCTACAACGGAGAAGATCTATAAATGATTGTGCAAAGGATCTTAATACGAACGAAACTTCTCCAACCAAAGAACGTAAGATGCACATGTGTTTATTGTGCCCCTATACCAATCAACGCCAGGATTCCTTAACAAACCACTATAGGCGACATGGTGACACAGACGCTTTAACTGCCACAAACCATAAATGTTCTTATTGTGATCTTGTTGTTGTACAGTCACATTTTCTTCGAGAgcatttaaaaacacatttcaatTACCACAAGACTCTTACACCTGAATGTTTCGTGGCAAATGAAGACGTTGGCTTTACGATTACTAAGATTGAAGATGACAGTAGTGAACCAGTTGATCTCAATTTAAATGTGCAAAACAAGATATTTGTCtgcaaagaagaaaaaatgtatgtaaaaattgcCACAGGTGAACTGTTGGCTGCTTGGGATTag
- Protein Sequence
- MLQQMSSPPSAQVGEVATLFGRYLEGRAGGDVSSEASSDAAEDLELPQCKIRRNYNCTKCTFYTQNPRAFLVHTRDAHFVKLKIFDCPHCVYASKHHQKLIRHIKMVHEEVVTRTPKSNSSAKLDVEVPNSTHDDQCMRIEDMLEEVEDCEDMMIEVEEGPDYSMEQVDDIDAVDDLTTEHAAPSNLLKTKNNVKFFTCDKCTYVTHIRARFTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGSGSFHCSMCNFTADIKQSLTVHEMNHHTPPAGQSLSGRRRNRVGASDTVIAEHDAANVALPKDEEGSGDSRSSHSVSEMGLQYADREIVSCKSDSNDGSPPDASEKRDSQSSPNHSSDESKQKNNRKIPRPIPQLIPLNSSAPNQKQTNTGEPPQKKFKESSPVDLTDTKSDKIENLPTDISLFPINNSLSKEVGGRKKNESFFDRLKERLLAETGEEGSLVCKNCGFESKCLSEHSVHEKNCSPQANRTTANASHSSLSSTRCQNCRHRCKSSADLYVHMKTCAKNYRVENDNICKNKNEDSNDTTTTNQEKELERHPMENVVFVWNNIDQDTNKFDTPLGININDDSTLPGPNRSFDVEIIDENESMNLSPSQAVGRKVFKCPHCPFFSTTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNDAKVLMTDETGRRNYSKYNKFLAMPVLNEYGENEFHYLDCNTSIDGSMEIDDSFHDMSDVMSEHYEMQPLNLQTQYGDEKYDLLDSRGLSFNDMKKPKKTLWKCKKCNYKDPSKEALLEHVREHSKDGIQEEPLKSAGSKKSENTPDPADLAYRCGHCHQLSNWKHVIQRHCRLKHDGVIKVITTVKPKPDPVSINDINDTCNKCPFRSNDKKLLIAHLQQHQPSPQSVFKCYFCPYFVKDENELSQHLLVHGITEPEDYISKAMEEKSPLQEQQLNPSSCSTKRHRCTECPYETNSKSQYMYHEQFHRTPSDTPYKCPECNYSVSKRHLLHQHLRVHGIITKRLDVEYGLDQPSTSQNKNDGKIDSEGIFYEEIPYVWVSAKNEFHKMYKCRYCSYVNSIQCKIPNHENLHFIVFENNDTTIYKCLECKFTCNNASRLAEHSKSHGEIYGRIYCPVENDSPDEQQIAKLRKVIEMDKGTENFSKEEGVTESREIKMLYFCHMCPARFFEDTELESHKTFHNATLPNKCTSCEYSVSEGNDLAAHETVHTDEYHTKTKILKFLHNLHPTHRQPQLAMAPDSTDSEIKWISIGPPKAENVESNVKKSHDTKHVPKQYFCKLCPAKFFKSSALNYHAALHGGDGDHKCKTCNYAVKNIGNLAKHEILHEKKNKPSNCDYESGEDMDYKNVPLSGTDLFQRKTEAQKRVLIDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKGNNGFVMAENQDLNKDESTDNIKLAIKTMPKGPPKSDFQQFSISDQQTLRLLQRRRSINDCAKDLNTNETSPTKERKMHMCLLCPYTNQRQDSLTNHYRRHGDTDALTATNHKCSYCDLVVVQSHFLREHLKTHFNYHKTLTPECFVANEDVGFTITKIEDDSSEPVDLNLNVQNKIFVCKEEKMYVKIATGELLAAWD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00795310;
- 90% Identity
- iTF_00442003; iTF_01361154; iTF_00823498; iTF_01198261; iTF_00157655; iTF_00707452;
- 80% Identity
- -