Basic Information

Insect: Tyria jacobaeae
Gene Symbol: -
Assembly: GCA_947561695.1
Location: OX387213.1:7565945-7576261[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 2.2 1.8e+02 3.4 1.0 1 23 55 78 55 78 0.95

2 21 0.04 3.2 8.9 4.4 1 23 85 108 85 108 0.97

3 21 9.7 7.8e+02 1.4 4.3 1 23 197 219 197 219 0.97

4 21 0.0017 0.13 13.2 1.0 2 23 225 246 224 246 0.97

5 21 6.6 5.3e+02 1.9 3.1 1 23 252 274 252 275 0.94

6 21 0.2 16 6.7 3.8 2 22 509 529 508 529 0.96

7 21 0.084 6.8 7.9 2.6 1 23 628 650 628 650 0.95

8 21 0.37 30 5.8 0.3 2 23 789 810 788 810 0.96

9 21 0.0051 0.41 11.7 0.6 2 23 887 908 886 908 0.96

10 21 0.056 4.5 8.4 0.8 1 23 916 938 916 938 0.97

11 21 0.15 12 7.1 3.2 1 23 972 994 972 994 0.95

12 21 0.00024 0.019 15.9 4.0 1 23 1002 1024 1002 1024 0.99

13 21 0.1 8.2 7.6 1.9 1 23 1110 1132 1110 1132 0.99

14 21 1.5 1.2e+02 3.9 1.5 1 21 1185 1205 1185 1207 0.88

15 21 1.2 99 4.2 0.0 2 23 1214 1235 1213 1235 0.94

16 21 0.052 4.2 8.5 1.6 1 23 1301 1323 1301 1323 0.94

17 21 0.0057 0.46 11.5 0.9 1 23 1329 1351 1329 1351 0.95

18 21 0.0066 0.53 11.4 2.6 1 23 1441 1463 1441 1463 0.97

19 21 0.00016 0.013 16.4 1.4 1 23 1469 1491 1469 1491 0.99

20 21 0.32 26 6.0 2.9 1 23 1582 1604 1582 1604 0.96

21 21 0.0096 0.77 10.8 5.6 1 23 1615 1637 1615 1637 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	2.2	1.8e+02	3.4	1.0	1	23	55	78	55	78	0.95
2	21	0.04	3.2	8.9	4.4	1	23	85	108	85	108	0.97
3	21	9.7	7.8e+02	1.4	4.3	1	23	197	219	197	219	0.97
4	21	0.0017	0.13	13.2	1.0	2	23	225	246	224	246	0.97
5	21	6.6	5.3e+02	1.9	3.1	1	23	252	274	252	275	0.94
6	21	0.2	16	6.7	3.8	2	22	509	529	508	529	0.96
7	21	0.084	6.8	7.9	2.6	1	23	628	650	628	650	0.95
8	21	0.37	30	5.8	0.3	2	23	789	810	788	810	0.96
9	21	0.0051	0.41	11.7	0.6	2	23	887	908	886	908	0.96
10	21	0.056	4.5	8.4	0.8	1	23	916	938	916	938	0.97
11	21	0.15	12	7.1	3.2	1	23	972	994	972	994	0.95
12	21	0.00024	0.019	15.9	4.0	1	23	1002	1024	1002	1024	0.99
13	21	0.1	8.2	7.6	1.9	1	23	1110	1132	1110	1132	0.99
14	21	1.5	1.2e+02	3.9	1.5	1	21	1185	1205	1185	1207	0.88
15	21	1.2	99	4.2	0.0	2	23	1214	1235	1213	1235	0.94
16	21	0.052	4.2	8.5	1.6	1	23	1301	1323	1301	1323	0.94
17	21	0.0057	0.46	11.5	0.9	1	23	1329	1351	1329	1351	0.95
18	21	0.0066	0.53	11.4	2.6	1	23	1441	1463	1441	1463	0.97
19	21	0.00016	0.013	16.4	1.4	1	23	1469	1491	1469	1491	0.99
20	21	0.32	26	6.0	2.9	1	23	1582	1604	1582	1604	0.96
21	21	0.0096	0.77	10.8	5.6	1	23	1615	1637	1615	1637	0.98

Sequence Information

Coding Sequence: ATGCTACAGCAGATGTCCTCGTCCCCGAGCGCACAAGTCGGCGAGGTCGCGACTGTCTTCGGGCGCTACCTTGACGGCCGTGCCGGTGGAGACGTCTCTTCGGAAGCCTCCTCCGACGCCGCTGAAGATTTAGAGTTACCACAGTGCAAAATAAGAAGGAACTATAATTGCACGAAGTGCACGTTCTATACGCAGAACCCACGCGCTTTTCTCGTACATACGCGTGACGCTCACTTCGTTAAACTAAAAATCTTTGATTGTCCACATTGTGTTTACGCATCCAAACATCATCAAAAACTTATAAGACATATAAAAATGGTTCACGAAGAAGTTGAAACACGAAATTCGAAGTCTAATTCTTTAGTAAAATTAGATGTGGAGTTACCAAACTCCGCCCACGATGATCAATTTATGCATATAGAAGATATGTTAGAAGAAGTAGAAGACTGTGAGGATATGATGATGGAAGTTGAAGAAGGACCTGACTACTCAATAGAAAACGTCGACGACATTGATGTCGTCAGCGACTTAACAGCAGAACAAGCAGCGCCCTCAAACCTATTAAAAACAAAGAGCAACGTTAAGTTTTTCACATGTGATAAGTGCACCTATGTTACCCACATAAGAGCTAGATTTACTAAACATGTCAAATACCACTCTATGCCTATGATAAAGTGTACTATGTGTGATTTCCGGACACCATATAAGTGGAACTTGGACCGCCACATGAAGAACCATGGTGGTAGCGGAAGTTTTCATTGTTCCATGTGCAACTTCACTGCAGACATCAAGCAGAGTTTGACGGTTCACGAAATGAATCATCACACACCGCCGGCGGGCCAATCGTTGGCGAGTCGCCGTCGCAACCGGGTGGGTGCCAGCGATACGGTTATCGCCGAGTACGACGCAGCGCTTCCCAAGGAGGAAGAAGGGAGCGGCGACTCGCGGTCCTCACAGTCGGTCTCGGATATGGGATTACAATACGCTGACAGAGAAATCGTTAGCTGCAAAAGCGACTCTAATGACGGCTCACCCTCCGAAGCCCCGGGCAAGCGGGACAGTCATGGCTCACCTAACCACAGCTCAGATGAGTCCAAACAAAAGCATAACAGAAAAATCCCACGACCAATACCACAACTTATACCGTTAAATTCCTCAACTCCTAATCAAAAGCAAACAACTAATGGTGAACCACCGCAAAAAAAATTCAAAGAATCTTCACCTGTTGATTTAACTGATTCGAATTCAGACAACAAAAATGAAATACTGCCTGCTGATATCACTTTAATCCCTGTCAACAATCATTCAGGGAAGGAGGCAAGTGGACGTAAGAAAAATGAGTCGTTTTTCGACAGACTAAAGGAAAGGTTGCTAGCTGAAACTGGGGAAGAAGGATCTCTTGTATGCAAAAATTGTGGATTTGAAAGTAAATGTTTATCAGAACACTCTGTGCATGAGAAAAATTGCACACCACAAGCCAATCGAACGACTGCAAATGCGTCGCATTCAAGCTTAAGTTCTACACGATGTCAAAATTGTAGGCATAGATGTAAATCGAGTGCTGATTTATATATTCACATGAAAACTTGCGGTAAAAGTGCAAAAGTTGTGAACGATAATATTTGCTTAAGCAAAAATGACGATAGCAATGACACTTCTACTACAAATCAAGATAAAGAGTTAGAACGCCATCCTATGGAAAATGTTGTTTTCGTTTGGAATAACATTAATCAAGATACAAACAAATTTAATACTCCTTTAGGTATCAATATAAACGATGATTCTACTCTACCTGGAGCAAACCGAAGCTTTGATGTTGAGATCATTGATGAAAATGAAAGTATGAATTTATCACCGAGTCAAGCTATCGGGAGAAAAGTATTTAAGTGTCCGCACTGTCCATTCTTCTCCACAACCGCATCCAGATTTCATGTCCATATTGTTGGCCACTTGAACAAAAAGCCCTTTGAATGTTCTCTATGTAAATATAAATCGAACTGGAGGTGGGATATCACGAAACATATAAAGCTTAAGTCTGCAAGAGATCCAGAACACAATGATGCTAAAGTACTAATGACTGATGAGACAGGGAGAAGAAATTATAGCAAATATAACAAATTCTTGGCAATGCCAGTGTTGAACGAATTTGGAGAAAATCAGTTCCACTATTTGGATAGTAACACATCGATAGATGGCTCCATGGAAATCGATGATTCATTCCATGACGTGCCAGATGTCATGAATACGCATTACGAAATGCAACCACTGAATCTGCAAACTCAATACAGTGACGAGAAGTATGACGTCCTTGATGGAAGGGGTCTGAGTTTTAATGATATGAAGAAGCCTAAGAAAACACTATGGAAATGTAAAAAATGTAATTACAAGGACCCGTCAAAGGATGCTCTTTTAGAACACGTTCGAGAGCATTCAAAAGATGGAATGCAAGAAGAACCGCAGAAGTCTGCTGCTTCAAAGAAATCCGAAAATTCTCCTGATCCAGCGGACTTGGCATATCGTTGTGGCCATTGCCACCAGCTCTCTAATTGGAAACATGTGATACAGAGACACTGCCGTTTGAAGCACGATGGCGTAATAAAGGTTATAACGACAGTGAAACCAAAACCAGATCCTGTAAGCATAAATGACATCAACGACACGTGTAACAAATGTCCATTCAGATCAAGTGACAAAAAACTGCTTATTGCCCACCTGCAACAACATCAGCCTTCTCCGCAATCGGTATTTAAATGCTACTTTTGTCCCTACTTCGTAAAAGATGAAAACGAACTCTCGCAACATCTCCTTCTACACGGCATCACGGAACCTGAAGATTATATTTCAAAGGCTATGGAAGACAAATCTCCTTTACAAGAACAGCAATCAAATCCTCTAACATGTTCAACGAAACGTCATAGATGTACGGAATGCCCATACGAAACAAATAGCAAATCCCAATATATGTACCATGAACAGTTTCACCGCACACCAGCAGACACGCCTTACAAATGTCCGGAGTGCAACTACAGCGTGTCCAAGAGGCATCTACTGCATCAACATTTAAGAGTACATGGAATAATCACAAAAAGGTTAGATGTAGAATACGGTTTAGAGCAGCCATCAACATCGCAAAACAAAAATGATGGTAAAATAGAATCTGAAGCTAGCTTTTATGAACAAATTCCATACGTCTGGGTGTCTGCTAAGAATGAGTTTCATAAAATGTACAAATGTCGATACTGTTCATACGTTAATTCCATAAAATGCAAAATTCCAAATCACGAAAATATTCATTTTATTGTTTTTGAGAATAATGATACAACGATTTACAAGTGTCTGGAATGCAAATTTACATGTGACAATGCCGGTAGACTTGCAGAGCATTCGAAAACACATGGTGAAATATATGGTCGTATTTACTGTCCCGTGGAAGATGACGTTCCAGATGATGAACAAATTGCAAAGTTAAGAAAAGTTATTGAAATGGATAAAGGCACAGAAAACTTTTTTAAAGAAGAAGGAGTAAACGAAAGCAGAGAAATAAAAATGTTATACTTTTGTAAGAAGTGTCCAGCTAGATTTTTTGACGATACTGAATTCGAAAGTCACAATGCATTCCATGGCGCCGCATTGCCGAATAAATGTAATTATTGTGAGTATTCAGTGCCTGGAGGAAATGAATTAGAAGCACATGAAACAGTGCACACTGATGAATATCACACAAAAACTAAAATACTTAAATTTCTACATAACTCACATCCTACTCACAGGCAACCTCGATTAGAAGTGACCCCAAATTCTTCAAGTTCTGAAATCAGATGGATATCTGTTGGACCATTGATTGAAACTATTGAAAGCAGTATAAAAAAATCTCATGATACAAAACATGTGCCAAAGCAATATTGTTGTAAGCTATGCCCTGCTAAATTCTTTAAAAGTTCAGCTCTTAACTATCACGCAGCCCTACATGGAGGAGAAGGTGATCATAAGTGTAAGAAATGTAATTATGCCGTCAAAAATATAGGCAATTTAGCCAAACATGAGATACTGCACGAAAAAGGAAACAAACCTTCCAATTGTGATTATGAATCTGGTGAAGACATGGACTATAAGAATATTCCACTATCGGGCACAGATTTATTCCAGAGAAAGACTGAAGCTCAAAAAAGAGTATTGACAGATAAAGATAAATTGGTTAAACCAAACGATCATTTTCCGCCTGTCTTACAAGCTGACCCACAATTCGGATATTTGATGCACGGTAATCCAGAGTTTATATATCCCACTTATTTGAAAAATGGGCGACAAAAAGAAAAGCGTTATAAGTGTCACAAATGTCCCTCCGCATTTGAGAAAAGAGAACAATATAAAATCCATCTATCATTACATGGCTCTAAACAAAGATATAAATGTGAATTATGCGACTATTCTGTGAAATATTACGCTAATTACGTCCAACATATGAGGAAACATCAAATGAATGATGAGGCGCAAGCGGAAAGAAAAAAAGGCAACGATGATTTTGTTATATCTGAAAATCCGGATCTGAAACAAGATAATAGTACAGATAATATTAAACTAGCAATCAAAACTATGCCAAAAGGACCTCCAAAAAGCGATTTCCAACAGTTCTCTATAAGTGACCAACAAACCCTTCGACTACTACAACGAAGAAGGTCAATAAATGAATATGGAAAGGATCTAAACACGAATGAATCTTCTCCGACGAAAGAACGTAAAATGCACATGTGTTTATTGTGCCCTTATACAAATCAGCGTCAAGATTCCTTGACAAACCACTATAGGAGACATGGCGACACAGACGCTTTGACTGCTGCAAATCATAAATGTTCTCATTGTGATCTTGTTGTAGTACAGTCGCATTTTCTTCGAGAACATTTGAAGACTCATTTCAATTACCACAAGACCCTTACGCCAGAGTGTTTCGTAGCGAACGAAGACGTTAGCTTTACGATATCTAGGATTGAAGATGAAGGTAGCGAACCAGTTGATCTCAAGTTAAATGTGCAAAGCAAAATCTTTGCATGCAAAAATGAAGAAAAAATGTTTGTTAAGATTGCGACAGGTGAACTGTTGGCTGCTTGGGAAGAATAA
Protein Sequence: MLQQMSSSPSAQVGEVATVFGRYLDGRAGGDVSSEASSDAAEDLELPQCKIRRNYNCTKCTFYTQNPRAFLVHTRDAHFVKLKIFDCPHCVYASKHHQKLIRHIKMVHEEVETRNSKSNSLVKLDVELPNSAHDDQFMHIEDMLEEVEDCEDMMMEVEEGPDYSIENVDDIDVVSDLTAEQAAPSNLLKTKSNVKFFTCDKCTYVTHIRARFTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGSGSFHCSMCNFTADIKQSLTVHEMNHHTPPAGQSLASRRRNRVGASDTVIAEYDAALPKEEEGSGDSRSSQSVSDMGLQYADREIVSCKSDSNDGSPSEAPGKRDSHGSPNHSSDESKQKHNRKIPRPIPQLIPLNSSTPNQKQTTNGEPPQKKFKESSPVDLTDSNSDNKNEILPADITLIPVNNHSGKEASGRKKNESFFDRLKERLLAETGEEGSLVCKNCGFESKCLSEHSVHEKNCTPQANRTTANASHSSLSSTRCQNCRHRCKSSADLYIHMKTCGKSAKVVNDNICLSKNDDSNDTSTTNQDKELERHPMENVVFVWNNINQDTNKFNTPLGININDDSTLPGANRSFDVEIIDENESMNLSPSQAIGRKVFKCPHCPFFSTTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNDAKVLMTDETGRRNYSKYNKFLAMPVLNEFGENQFHYLDSNTSIDGSMEIDDSFHDVPDVMNTHYEMQPLNLQTQYSDEKYDVLDGRGLSFNDMKKPKKTLWKCKKCNYKDPSKDALLEHVREHSKDGMQEEPQKSAASKKSENSPDPADLAYRCGHCHQLSNWKHVIQRHCRLKHDGVIKVITTVKPKPDPVSINDINDTCNKCPFRSSDKKLLIAHLQQHQPSPQSVFKCYFCPYFVKDENELSQHLLLHGITEPEDYISKAMEDKSPLQEQQSNPLTCSTKRHRCTECPYETNSKSQYMYHEQFHRTPADTPYKCPECNYSVSKRHLLHQHLRVHGIITKRLDVEYGLEQPSTSQNKNDGKIESEASFYEQIPYVWVSAKNEFHKMYKCRYCSYVNSIKCKIPNHENIHFIVFENNDTTIYKCLECKFTCDNAGRLAEHSKTHGEIYGRIYCPVEDDVPDDEQIAKLRKVIEMDKGTENFFKEEGVNESREIKMLYFCKKCPARFFDDTEFESHNAFHGAALPNKCNYCEYSVPGGNELEAHETVHTDEYHTKTKILKFLHNSHPTHRQPRLEVTPNSSSSEIRWISVGPLIETIESSIKKSHDTKHVPKQYCCKLCPAKFFKSSALNYHAALHGGEGDHKCKKCNYAVKNIGNLAKHEILHEKGNKPSNCDYESGEDMDYKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKGNDDFVISENPDLKQDNSTDNIKLAIKTMPKGPPKSDFQQFSISDQQTLRLLQRRRSINEYGKDLNTNESSPTKERKMHMCLLCPYTNQRQDSLTNHYRRHGDTDALTAANHKCSHCDLVVVQSHFLREHLKTHFNYHKTLTPECFVANEDVSFTISRIEDEGSEPVDLKLNVQSKIFACKNEEKMFVKIATGELLAAWEE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00795310;
90% Identity: -
80% Identity: -