Basic Information

Insect: Lithosia quadra
Gene Symbol: -
Assembly: GCA_963576445.1
Location: OY754875.1:13383748-13392472[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 3.6 2.4e+02 3.0 0.9 1 23 54 77 54 77 0.94

2 19 0.047 3.2 8.9 4.4 1 23 84 107 84 107 0.97

3 19 0.002 0.13 13.2 1.0 2 23 231 252 230 252 0.97

4 19 7.7 5.2e+02 1.9 3.1 1 23 258 280 258 281 0.94

5 19 0.2 13 6.9 3.8 2 22 508 528 507 528 0.96

6 19 0.099 6.6 7.9 2.6 1 23 626 648 626 648 0.95

7 19 0.69 46 5.2 0.3 2 23 786 807 785 807 0.96

8 19 0.0013 0.088 13.8 0.5 2 23 884 905 883 905 0.96

9 19 0.037 2.5 9.2 0.5 1 23 913 935 913 935 0.97

10 19 0.18 12 7.1 3.2 1 23 969 991 969 991 0.95

11 19 0.00028 0.019 15.9 4.0 1 23 999 1021 999 1021 0.99

12 19 0.12 8.1 7.6 1.9 1 23 1103 1125 1103 1125 0.99

13 19 7.6 5.1e+02 1.9 1.7 1 23 1178 1200 1178 1200 0.87

14 19 0.039 2.6 9.2 0.5 1 23 1294 1316 1294 1316 0.94

15 19 0.01 0.69 11.0 0.9 1 23 1322 1344 1322 1344 0.96

16 19 0.0077 0.52 11.4 2.6 1 23 1434 1456 1434 1456 0.97

17 19 0.00019 0.013 16.4 1.4 1 23 1462 1484 1462 1484 0.99

18 19 0.38 26 6.0 2.9 1 23 1575 1597 1575 1597 0.96

19 19 0.021 1.4 10.0 4.9 1 23 1608 1630 1608 1630 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	3.6	2.4e+02	3.0	0.9	1	23	54	77	54	77	0.94
2	19	0.047	3.2	8.9	4.4	1	23	84	107	84	107	0.97
3	19	0.002	0.13	13.2	1.0	2	23	231	252	230	252	0.97
4	19	7.7	5.2e+02	1.9	3.1	1	23	258	280	258	281	0.94
5	19	0.2	13	6.9	3.8	2	22	508	528	507	528	0.96
6	19	0.099	6.6	7.9	2.6	1	23	626	648	626	648	0.95
7	19	0.69	46	5.2	0.3	2	23	786	807	785	807	0.96
8	19	0.0013	0.088	13.8	0.5	2	23	884	905	883	905	0.96
9	19	0.037	2.5	9.2	0.5	1	23	913	935	913	935	0.97
10	19	0.18	12	7.1	3.2	1	23	969	991	969	991	0.95
11	19	0.00028	0.019	15.9	4.0	1	23	999	1021	999	1021	0.99
12	19	0.12	8.1	7.6	1.9	1	23	1103	1125	1103	1125	0.99
13	19	7.6	5.1e+02	1.9	1.7	1	23	1178	1200	1178	1200	0.87
14	19	0.039	2.6	9.2	0.5	1	23	1294	1316	1294	1316	0.94
15	19	0.01	0.69	11.0	0.9	1	23	1322	1344	1322	1344	0.96
16	19	0.0077	0.52	11.4	2.6	1	23	1434	1456	1434	1456	0.97
17	19	0.00019	0.013	16.4	1.4	1	23	1462	1484	1462	1484	0.99
18	19	0.38	26	6.0	2.9	1	23	1575	1597	1575	1597	0.96
19	19	0.021	1.4	10.0	4.9	1	23	1608	1630	1608	1630	0.97

Sequence Information

Coding Sequence: ATGCTACAGCAGATGTCCTCGCCGAGCGGGCTAGTCGGCGAGGTCGCGACTGTCTTCGGGCGCCACCTTGAAGGCCGCGCCTGTGGAGACGTTTCTTCCGAAGCCTCCTCCGACGCTGCAGAAGATTTCGAGTTACCACAGTGCAAGATAAAGAGGAACTATAACTGCACCAAGTGCACGTTCTATACGCAGAACCCGCGCGCTTATCTTGTACACACGCGTGACGCTCACTTcgtcaaattaaaaatttttgaTTGTCCACACTGTGTTTACGCATCGAAGCATCATCAAAAACTTATTCGACATATAAAAATGGTTCACGAAGACGTAGAAACGAAAAAGTTGATTTCTGAAGAAGCACAGACGCGGACTTCGAAATCGTCTTCATCGGTGAAGTTGGATGTTGAGGTATTGAACGCCGAACTCGAAGAAGAATCTATGCGAATGGAAGATCTAGTCGAAGAAGTAGAAGACTGTGAAGATATGATGATGGAAGTAGAAGATGGCCCCGATTACTCAATGGATATGGTAGAAGACATCGATGCTATGGGCGACTCAACACTAGAACAAGCAGCGCCCTCCAAAGCAAAGAGCAACGTTAAGTTTTTCACATGTGATAAGTGCACCTACGTTACCCACATAAGGGCTAGATTTACTAAACACGTCAAGTACCATTCAATGCCTATGATAAAGTGTACAATGTGTGATTTCCGGACACCGTATAAGTGGAACTTGGACCGGCACATGAAGAACCACGGTGGTAGTGGCAGTTTTCATTGTTCCATGTGCAACTTCACTGCGGACATCAAGCAGAGTCTGACTGTTCATGAAATGAACCATCACACACCGCCAGCGGGCCAATCGCTGGCGAGTCGCCGTCGCAACCGGGTGGGTGCCAGCGACACGGTTAGCGCCGAGTACGACGCAGCAAGCGCGGCGCTCCCCAAGGAGGAAGAAGGGAGCGGCGACTCGCGGTCCTCACACTCGGTCTCGgATATGGGTCTACAATACGCCGAGAGAGAAATAGTCAGCTGCAAAAGTGACCACTCAAATGACGGGTCTCCCGCTGATCCCAATGGCAACCACAGTTCAGATGAgtccaaacaaaaacaaaataaaaaaatgcctcGTCCTATTCCTCAGCTCATACCGCTAAATTCCTCAACGCCCAATCAAAAGCAATCTACTGGTGAACCGCCGCAGAAAAGATTCAAAGAGTCTTCACCTGTGGATTTAACCGATTCCAATTCAGACAACAGAATTGAAAATTTGCCAGCTGAAATAACTTTAATCCCTGTCAACAATCCCTCAATGAAAGAGATTGGTGGACGCAAGAAAAATGAATCATTCTTTGACAGACTAAAGGAAAGATTGCTAACTGAAACTGGTAAAGAAGGTTCTCTGAGATGTAAAAATTGTGGATTTGAAAGTAAATGCTTATCAGAACACTCTGTTCATGAGAAAAATTGTACACCACAATCCAATCGAATCACTCCAAATGCGCCAAGCTTAAGTTCTACACGGTGCCAAAATTGTAGGCATAGATGTAAATCAAGCGCTGACTTGTATGTTCACATGaaaacttgtaataaaaatgaaaaggtTAATGAGAACATTACAGAAGTTAAGAACGATGATAGCAATGACACTTCCATTCCAAATCAAGATAAAGAAATAGAGAAGCATCCTATGGAAAACGTTGTTTTCGTATGGAACAATATTAATCAAGATACCAATAAGTTTGATACTCCtttagatattaatataaatgatGACTCTACTCTACCAGAAATGAACCGAATGTTTGATGTTGAGATCATTGACGAAAATGAATCTATGAATTTGTCACCAAGTCAAGCTGTTGGGAGAAAAGTATTCAAATGTCCACACTGTCCATTTTTTTCGACTACCGCATCCAGGTTTCACGTTCATATTGTTGGTCATTTGAACAAGAAGCCTTTTGAATGTTCACTTTGTAAGTATAAATCAAACTGGAGATGGGATATCACGAAGCATATTAAGCTGAAGTCTGCAAGAGATCCAGAACACAATGATGCAAAAGTATTAATGACCGATGAAACAGGAAGAAGAAATTATAGTAAATATAACAAGTTCTTGGCAATGCCAGTATTGAACGAATATGGAGAAAACCAATTCCACTATTTGGATTCTAATACATCGTTAGATGGATCGATGGAAATTGACGATTCAATCCATGATATGACCGATGTGATGAATCCACAATATGAAATGCAGCCGTTGAACCTGCAGACTCAATATGACGAGAAGTACGACTTACTTGATAATAGGAGTCTCAATTTAAATGACATAAAGAAACCGAAGAAAACGCTGTGGAAatgtaaaaaatgcaattataaGGATCCCTCAAAAGAAGCTCTATTGGAACATGTGCGTGAACATTCAAAGGATGGCGTGCAAGAGGAACTTCAAAAGCCTCCAGCTGCAAAGAAATCCGAGAATACTCCCGATCCAGCAGACTTGGCGTACCGCTGTGGCCACTGCCACCAACTCTCTAATTGGAAACATGTGATACAGcGCCACTGCCGTTTGAAACATGAGGGTGTCATTAAAGTTATAACTACAGTGAAACCAAAACCAGATCCAGTGAGCATAAATGACATCACTGACACATGTAATAAATGTCCATATAGGACAAGCGATAAAAAACTGCTCATTGCACATCTACAACAGCATCAGCCTTCGCCGCAATCGGTATTCAAATGTTTCTTCTGCCCGTACTTTGTAAAAGATGAGCCCGAGTTGACTCAACATCTCCTTCTACACGGCGTCACTGATCCCGAAGATTATATTACGAAAGGTATGGAAGATAAGTCTAACTTACAAGATCAGCCATCAGTATCCTCAATATGTTCAACGAAACGACATAGATGTACTGAATGTCCATATGAGACAAATAGCAAGTCCCAATACATGTACCATGAACAATTTCACCGTACACAAGCAGATACACCATATAAATGTCCAGAATGCAACTACAGCGTGTCTAAAAGGCATCTTCTACATCAACATTTGAGAGTTCATGGAATAATTACAAAAAGGTTGGACGTAGAATACGGTTTAGAGCAACCGTCATCGTCGCAGACCAAAAACGATCCCGAAGCCAGCGCATACGAAGGAATTCCGTATGTTTGGGTTTCAGCAAAGAATGAATTCCATAAAATGTACAAGTGTCGATATTGCTCATATGTTAAttctataaaatgtaaaattccaAATCacgaaaaaatacattttattattttcgaaaataaTGATACAACTATTTATAAGTGTTTAGAATGTAAATTCACATGTGATAATGCTGGCAGACTTGCAGAACACTCTAAAACGCACGGCGAAATATATGGCCGCATTTACTGTCCAGTAGAAGAAGACGTTTCAGACGACGAACAAATTACTAAACTAAGGAAAGTTATAGAAATGGAAAAAGGTAcagaaaactttttaaaagagGAAGGATTAAACGAAAATAGAGAAATGAAGTTACTGTATTTTTGCCACCAGTGTCCAGCCAGATTTTTCGAAGATGCTGAATTAGACAGCCACAATAAATTTCATGATACTGTATTCCCGAATAAATGTAATAGTTGTGAGTTTTCAGTCCCTGAAGAAAATGAGTTAGCAACACATGACACGGTGCACACAGATGaatatcatacaaaaactaaaatacttaaatttattcaCAATTCACATCCTTCTCATCGCCAACCTCGATTAGAGACGATACATAGTCCTGCTAGTTCTGAAATCAGATGGATATCTGTAGGGCCAATAATTGAAAACATTGTAAGTGGTACGAAAAAATCACATGATACAAAGCACGTGCCaaagcaatatttttgtaaactatGCCCTGCTAAGTTCTTTAAAAGTTCAGCACTCAACTATCACGCAGCCTTGCATGGAGGTGAAGGCGATCATAAGTGCAAGACATGTAATTATGCTGTAAAAAATATAGGCAATTTAGCTAAACATGAGTTATTACACGAAAATCTTAACAAACCTTCAAATTGTGATTATGAGTCTGGAGACGACATGGACTATAAGAATATACCACTATCAGGCACAGATTTGTTCCAGAGAAAGACTGAGGCTCAGAAAAGAGTGTTAACGGATAAAGATAAATTAGTTAAGCCAAATGATCATTTTCCACCCGTCTTACAAGCTGATCCACAATTCGGATATTTGATGCACGGGAATCCTGAATTTATATATCCTACTTATCTGAAAAATGGGCGACAAAAAGAGAAACGTTATAAGTGTCACAAATGTCCCTCGGCGTTTGAGAAAAGAGAGCAATATAAGATTCATTTATCATTACATGGTTCCAAACAGAGATATAAATGTGAATTATGTGATTATTCTGTAAAATATTATGCTAATTATGTACAGCATATGAGGAAACATCAAATGAACGATGAGGCACAAgcggaaagaaagaaagatagtaATGGTTTTGTTATATCTGAGAACCAAGACGTGAAACCACAAGGCAGCGCAGATACTATTAAACTTGCAATCAAGACTATGCCTAAAGGACCTCCAAAAAGCGATTTTCAACAATTCTCAATAAGTGACCAACAAACCCTTCGATTGCTTCAGCGCAGACGATCAATAAATGACTGTGGAAAAGACCTGAATACATCCGAAACTTCACCGACGAAAGAGCGTAAAATGCACATGTGTTTATTGTGTCCTTATACAAATCAACGTCAGGATTCATTAACGAACCACTACAGGAGACATGGCGACACAGACACATTAAATGCTGCCAATCATATGTGTTCTCACTGTGATCTTGTGGTCGTACAGTCTCATTTTCTTCGGGAACAtttaaaaacacattttaattacCACAAAACTCTCACGCCTGATTGTTTCGTGGCGAACGAAGATATTAGCTTTACGATAACTAAAATTGAAGACGAAGTTAGTGAACCAGTTGATCTCAAACTAAATGtggaaaacaaaatatttgcctGTAAAGACGACAAAAAGTATGTAAAAATGTCTACAGGCGAACTGTTGACTGCTTGGGAagaataa
Protein Sequence: MLQQMSSPSGLVGEVATVFGRHLEGRACGDVSSEASSDAAEDFELPQCKIKRNYNCTKCTFYTQNPRAYLVHTRDAHFVKLKIFDCPHCVYASKHHQKLIRHIKMVHEDVETKKLISEEAQTRTSKSSSSVKLDVEVLNAELEEESMRMEDLVEEVEDCEDMMMEVEDGPDYSMDMVEDIDAMGDSTLEQAAPSKAKSNVKFFTCDKCTYVTHIRARFTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGSGSFHCSMCNFTADIKQSLTVHEMNHHTPPAGQSLASRRRNRVGASDTVSAEYDAASAALPKEEEGSGDSRSSHSVSDMGLQYAEREIVSCKSDHSNDGSPADPNGNHSSDESKQKQNKKMPRPIPQLIPLNSSTPNQKQSTGEPPQKRFKESSPVDLTDSNSDNRIENLPAEITLIPVNNPSMKEIGGRKKNESFFDRLKERLLTETGKEGSLRCKNCGFESKCLSEHSVHEKNCTPQSNRITPNAPSLSSTRCQNCRHRCKSSADLYVHMKTCNKNEKVNENITEVKNDDSNDTSIPNQDKEIEKHPMENVVFVWNNINQDTNKFDTPLDININDDSTLPEMNRMFDVEIIDENESMNLSPSQAVGRKVFKCPHCPFFSTTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNDAKVLMTDETGRRNYSKYNKFLAMPVLNEYGENQFHYLDSNTSLDGSMEIDDSIHDMTDVMNPQYEMQPLNLQTQYDEKYDLLDNRSLNLNDIKKPKKTLWKCKKCNYKDPSKEALLEHVREHSKDGVQEELQKPPAAKKSENTPDPADLAYRCGHCHQLSNWKHVIQRHCRLKHEGVIKVITTVKPKPDPVSINDITDTCNKCPYRTSDKKLLIAHLQQHQPSPQSVFKCFFCPYFVKDEPELTQHLLLHGVTDPEDYITKGMEDKSNLQDQPSVSSICSTKRHRCTECPYETNSKSQYMYHEQFHRTQADTPYKCPECNYSVSKRHLLHQHLRVHGIITKRLDVEYGLEQPSSSQTKNDPEASAYEGIPYVWVSAKNEFHKMYKCRYCSYVNSIKCKIPNHEKIHFIIFENNDTTIYKCLECKFTCDNAGRLAEHSKTHGEIYGRIYCPVEEDVSDDEQITKLRKVIEMEKGTENFLKEEGLNENREMKLLYFCHQCPARFFEDAELDSHNKFHDTVFPNKCNSCEFSVPEENELATHDTVHTDEYHTKTKILKFIHNSHPSHRQPRLETIHSPASSEIRWISVGPIIENIVSGTKKSHDTKHVPKQYFCKLCPAKFFKSSALNYHAALHGGEGDHKCKTCNYAVKNIGNLAKHELLHENLNKPSNCDYESGDDMDYKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKDSNGFVISENQDVKPQGSADTIKLAIKTMPKGPPKSDFQQFSISDQQTLRLLQRRRSINDCGKDLNTSETSPTKERKMHMCLLCPYTNQRQDSLTNHYRRHGDTDTLNAANHMCSHCDLVVVQSHFLREHLKTHFNYHKTLTPDCFVANEDISFTITKIEDEVSEPVDLKLNVENKIFACKDDKKYVKMSTGELLTAWEE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00795310;
90% Identity: iTF_00638257;
80% Identity: -