Basic Information

Insect: Pelosia muscerda
Gene Symbol: -
Assembly: GCA_963691645.1
Location: OY829100.1:7018614-7027904[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 3.6 2.7e+02 3.0 0.9 1 23 54 77 54 77 0.94

2 19 0.047 3.5 8.9 4.4 1 23 84 107 84 107 0.97

3 19 0.002 0.15 13.2 1.0 2 23 224 245 223 245 0.97

4 19 7.7 5.7e+02 1.9 3.1 1 23 251 273 251 274 0.94

5 19 0.2 15 6.9 3.8 2 22 504 524 503 524 0.96

6 19 0.099 7.3 7.9 2.6 1 23 622 644 622 644 0.95

7 19 0.68 51 5.2 0.3 2 23 782 803 781 803 0.96

8 19 0.0013 0.097 13.8 0.5 2 23 880 901 879 901 0.96

9 19 0.026 1.9 9.7 0.9 1 23 909 931 909 931 0.97

10 19 0.18 13 7.1 3.2 1 23 965 987 965 987 0.95

11 19 0.00028 0.021 15.9 4.0 1 23 995 1017 995 1017 0.99

12 19 0.19 14 7.0 1.6 1 23 1098 1120 1098 1120 0.98

13 19 1.5 1.1e+02 4.2 1.7 1 23 1173 1195 1173 1195 0.93

14 19 0.017 1.3 10.3 0.5 1 23 1289 1311 1289 1311 0.94

15 19 0.01 0.76 11.0 0.9 1 23 1317 1339 1317 1339 0.96

16 19 0.0077 0.57 11.4 2.6 1 23 1429 1451 1429 1451 0.97

17 19 0.00019 0.014 16.4 1.4 1 23 1457 1479 1457 1479 0.99

18 19 0.38 28 6.0 2.9 1 23 1571 1593 1571 1593 0.96

19 19 0.011 0.84 10.9 5.6 1 23 1604 1626 1604 1626 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	3.6	2.7e+02	3.0	0.9	1	23	54	77	54	77	0.94
2	19	0.047	3.5	8.9	4.4	1	23	84	107	84	107	0.97
3	19	0.002	0.15	13.2	1.0	2	23	224	245	223	245	0.97
4	19	7.7	5.7e+02	1.9	3.1	1	23	251	273	251	274	0.94
5	19	0.2	15	6.9	3.8	2	22	504	524	503	524	0.96
6	19	0.099	7.3	7.9	2.6	1	23	622	644	622	644	0.95
7	19	0.68	51	5.2	0.3	2	23	782	803	781	803	0.96
8	19	0.0013	0.097	13.8	0.5	2	23	880	901	879	901	0.96
9	19	0.026	1.9	9.7	0.9	1	23	909	931	909	931	0.97
10	19	0.18	13	7.1	3.2	1	23	965	987	965	987	0.95
11	19	0.00028	0.021	15.9	4.0	1	23	995	1017	995	1017	0.99
12	19	0.19	14	7.0	1.6	1	23	1098	1120	1098	1120	0.98
13	19	1.5	1.1e+02	4.2	1.7	1	23	1173	1195	1173	1195	0.93
14	19	0.017	1.3	10.3	0.5	1	23	1289	1311	1289	1311	0.94
15	19	0.01	0.76	11.0	0.9	1	23	1317	1339	1317	1339	0.96
16	19	0.0077	0.57	11.4	2.6	1	23	1429	1451	1429	1451	0.97
17	19	0.00019	0.014	16.4	1.4	1	23	1457	1479	1457	1479	0.99
18	19	0.38	28	6.0	2.9	1	23	1571	1593	1571	1593	0.96
19	19	0.011	0.84	10.9	5.6	1	23	1604	1626	1604	1626	0.98

Sequence Information

Coding Sequence: ATGCTACAGCAGATGTCCTCGCCGAGCGGGCAAGTCGGCGAGGTCGCAACTGTCTTCGGGCGCTACCTTGAAGGCCGCGCCTGTGGAGACGTTTCTTCCGAAGCCTCCTCCGACGCCGCGGAAGAGTTCGAGTTACCACAGTGCAAGATAAAGAGGAACTATAACTGCACCAAGTGCACGTTCTATACGCAGAACCCGCGCGCTTATCTCGTACACACGCGTGACGCTCACTtcgttaaattaaaaatcttcGATTGTCCACACTGTGTTTACGCATCGAAGCATCATCAAAAACTTATTCGACATATAAAAATGGTTCACGAAGACGCTGAAGCACAAACACGTACTTCGAAATTGAGTTCGTCGGCGAAGTTGGACGTCGAGTTATCGAACTCTGCACTCGAAGAGGAATCTATGCGAATGGAAGATCTAGTCGAAGAAGTTGAAGACTGTGAAGACAACATGATGATGGAAGTAGAAGACGGCCCCGATTTCTCAATGGAGATGGCAGACGATATCGATGTTGTGGGCGACTTAACACTAGAACAAGCAGCGCCCTCCAAAGCTAAAAGCAACGTTAAATTTTTCACTTGTGATAAGTGCACCTACGTTacccacataagggctagattTACTAAACACGTCAAGTACCATTCTATGCCAATGATAAAGTGTACAATGTGTGATTTCCGGACACCGTATAAGTGGAACTTGGACCGGCACATGAAGAACCACGGTGGTAGTGGCAGTTTTCATTGTTCCATGTGCAACTTCACTGCGGACATCAAGCAGAGTTTGACGGTGCACGAAATGAATCATCACACACCGCCAGCGGGCCAATCGCTGGCGAGTCGCCGTCGCAACCGGGTGGGTGCCAGCGACACGGTTATCGCCGAGCACGACGCAGCTAACGCGGCGCTCCCCAAGGAGGAAGAAGGGAGCGGCGACTCGCGGTCCTCACACTCGGTCTCGGACATGGGTCTACAATACGCCGATAGAGAAATAGTCAGCTGCAAAAGCGACCACTCAAATGACGGGTCTCCCACCGAGGCCAACGGCAACCACAGTTCAGATGAGTCCAGACAAAAGCAATGCAGAAAAATTCCACGACCAATACCACAACTCATACCGCTGAATTCCTCAACACCCAATCAAAAGCAATCGTCTACTGGTGAACCGCCACAGAAAAAATTCAAAGAGTCTTCACCTGTGGATTTAACCGATTCAAATTCAGACAACAGAATTGAAAATTTGCCAGCTGATATTACGCTAATCCCTGTCAACAATTCATCCATAAAGGACGCAGGCGGGCGCAAGAAAAACGCATCGTTTTTTGACAGACTAAAGGAAAGATTATTGACAGAAACTGGTGAAGAAGGATCTCTGAGATGCAAGAATTGTGGTTTTGAAAGTAAGTGTTTATCAGAACATTCTGTGCACGAGAAAAATTGTACACCACAGTCCAATCTAATCACTGCAAATGCTTCCCTTTCGAGCCTAAGCTCCACACGGTGCCAAAATTGCCGACATAGATGTAAATCAAGCGCTGATTTGTATGTTCATATGAAAACATGTGGTAGAAATGAGAAGGTTAGCGAAAATACTACAGAAATTAAAAACGAGGATAGTAATGACACTACCATCCCAAATCAAGACAAAGAAACAGAGAAGCATCCTATGGAAAACGTTGTTTTCGTTTGGAACAATATTAATCAAGACACTAATAAATTTGATACTCCTttagatattaatataaatgatgacTCTACTCTACCAGAAACAAACCCATGTTTTGATGTTGAAATCATTGATGAGAATGAATCTATGAATTTGTCACCGAGTCAAGCTGTTGGGAAAAAGGTATTCAAATGTCCCCATTGTCCATTTTTCTCCACAACTGCATCCAGGTTTCACGTTCATATTGTTGGTCATCTGAACAAAAAGCCTTTTGAATGTTcactttgtaaatataaatcGAACTGGAGATGGGATATCACTAAACATATTAAACTGAAATCTGCAAGAGATCCAGAACATAACGATGCAAAAGTATTAATGACTGATGAAACAGGAAGAAGAAATTATAGTAAGTATAACAAGTTCTTGGCAATGCCAGTATTGAACGAATATGGAGAAAACCAGTTCCACTATCTGGATTCTAACACATCGATAGATGGATCCATGGAAATTGACGATTCATTCCATGATATGACAGATGCTATGAATACGCAATATGAAATGCAGCCATTGAATCTGCAGACTCAATATGATGAGAAATACGACTTGCTTGATAATAGGGGTCTAAATTtgaatgatattaaaaaaccgAAGAAAACCCTGTGGAAATGTAAAAAGTGCAATTACAAGGATCCCTCAAAGGAAGCGCTATTGGAACATGTGCGTGAACATTCAAAGGACGGCGTGCAAGAAGAGCTCCAAAAACCTTCGGCTACTAAGAAATCTGAGAATACTCCCGATCCAGCTGACCTGGCGTACCGCTGCGGCCACTGTCACCAACTTTCCAATTGGAAACATGTGATACAGcGCCATTGCCGTTTGAAACACGATGGTATAATCAAAGTCATAACAACAGTTAAGCCGAAGCCAGACCCAGTGAGCATAAATGACATCACCGACACATGCAATAAATGTCCATACAGGACAAGCGATAAAAAACTGCTCATTGCGCATCTACAACAACATCAGCCTTCACCGCAATCCGTATTCAAATGCTTCTTTTGTCCTTACTTTGTAAAAGACGAGAATGAGTTGACCCAACATCTCCTTCTACACGGGGTCACCGACCCCGAAGATTATATTTCAAAAGGTATGGAAGACAAGCCTAATTCACAAGATCAGCAATCAACGTCCTCAATATGTTCAACTAAACGACATAGATGTACTGAATGTCCGTATGAAACGAATAGCAAGTCCCAATACATGTACCATGAACAGTTTCATCGCACACCATCGGACACTCCATACAAATGTCCAGAATGCAACTATAGCGTGTCTAAAAGGCATCTACTTCATCAACATTTAAGAGTTCATGGAATTATTACCAAAAGACTGGACGTGGAATACGGTTTAGAACAGCCATCAACGTCACAGAAAAACGACCCTGAAGCCACCATATACGAAGGAATTCCGTACGTTTGGGTCTCTGCAAAGAATGAATTTCATAAAATGTACAAATGTCGATATTGTTCATATGTTAActctataaaatgtaaaattccAAATCACGAAaagatacattttattgtattcgAAAATAATGATACAACCATTTATAAGTGTTTAGAATGTAAATTCACATGTGATAACGCTGGTAGACTTGCAGAACACTCTAAAATGCACGGTGAAATATATGGCCGCATTTACTGCCCTGTTGAAGAAGATGTTTCAGACGATGAACAAATTGCTAAACTAAGAAAAGTTATAGAAATGGATAAAGGTACAGAAAACTTCTTCAAAGAAGATGGACTAAACGAAAACAGAGAAATAAAGTTATTGTATTTTTGCCACCAATGTCCCGCCAGATTTTTCGAAGATGCTGAGTTAGAAAGCCACAATAAATTTCATGAGTCCGTATATCCTAATAAATGTAACAGTTGTGAGTTTTCAGTCCCTGAAGAAAATGATTTAGCAACACATGAAACAGTGCACACAGATGAATATCATACTAAAACCaaaatacttaaatttattCACAATTCACATCCTTCTCATCGCCAACCTCGACTAGAAATGGCACACAGTCCCACTAATTCTGAAATCAGATGGATATCTGTAGGTCCAATAATTGAGAATATTGTAACTGGTACGAAGAAATCTAATGAGACAAAACATGTGCCAAAACAGTATTATTGTAAACTATGCCCTGCTAAATTCTTTAAAAGTTCAGCACTCAACTATCACGCCGCCTTACACGGAGGTGAAGGTGATCATAAGTGCAAAACATGTAACTATGCCGTCAAAAATATTGGCAATTTAGCTAAACATGAGCTATTACACGAAACTCATAATAAACCTTCAAATTGTGATTATGAATCTGGTGATGACATGGATTATAAGAATATACCACTATCAGGCACAGATTTGTTCCAGAGAAAGACTGAGGCTCAGAAGAGAGTGTTAACCGATAAAGATAAATTGGTTAAACCAAACGATCATTTTCCACCCGTCTTACAAGCTGATCCACAATTCGGATATCTGATGCATGGCAATCCTGAATTTATATACCCTACATATCTGAAAAATGGACGGCAAAAAGAGAAACGTTACAAATGTCACAAATGTCCCTCGGCGTTTGAGAAACGAGAACagtataaaattcatttatcGTTACATGGTTCCAAACAAAGATATAAATGTGAATTATGTGATTATTCTGTAAAATATTACGCTAATTATGTACAACATATGAGAAAACATCAAATGAACGATGAGGCCCAAGCGGAAAGAAGGAAAGATAGTAACGATTTTGTAATATCTGAGAACCAAGACGAAGTGAAACCACAAGGCAGTGCAGATACTATCAAACTTGCAATCAAAACTATGCCTAAAGGGCCACCGAAAAGCGATTTCCAACAATTCTCTATAAGTGACCAACAAACTCTTCGATTACTACAACGCAGGCGATCAATAAATGATAGTGGCAAAGACTTGAATACGTCCGAAACTTCGCCGACGAAAGAGCGTAAAATGCACATGTGTTTGTTGTGCCCCTATACAAATCAACGTCAGGATTCATTAACGAATCACTACAGGAGACATGGCGACACAGACACGTTAACTGCTGCCAATCATAAATGTTCGCACTGTGATCTTGTGGTCGTACAGTCCCACTTTCTTCGTGAACatttaaaaacacattttaatttcCACAAAACCCTCGCGCCTGATTGTTTCATGGCGAACGAAGACATTAGCTTTACGATAACTAAAATTGACGATGATACAAGTGAACCAGTTGATCTCAAATTAGATgtgcaaaacaaaataattgcgTGTAAAGACGagaaaatgtatgtaaaaatttCGACAGGCGAACTATTGACTGCTTGGGAGgaataa
Protein Sequence: MLQQMSSPSGQVGEVATVFGRYLEGRACGDVSSEASSDAAEEFELPQCKIKRNYNCTKCTFYTQNPRAYLVHTRDAHFVKLKIFDCPHCVYASKHHQKLIRHIKMVHEDAEAQTRTSKLSSSAKLDVELSNSALEEESMRMEDLVEEVEDCEDNMMMEVEDGPDFSMEMADDIDVVGDLTLEQAAPSKAKSNVKFFTCDKCTYVTHIRARFTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGSGSFHCSMCNFTADIKQSLTVHEMNHHTPPAGQSLASRRRNRVGASDTVIAEHDAANAALPKEEEGSGDSRSSHSVSDMGLQYADREIVSCKSDHSNDGSPTEANGNHSSDESRQKQCRKIPRPIPQLIPLNSSTPNQKQSSTGEPPQKKFKESSPVDLTDSNSDNRIENLPADITLIPVNNSSIKDAGGRKKNASFFDRLKERLLTETGEEGSLRCKNCGFESKCLSEHSVHEKNCTPQSNLITANASLSSLSSTRCQNCRHRCKSSADLYVHMKTCGRNEKVSENTTEIKNEDSNDTTIPNQDKETEKHPMENVVFVWNNINQDTNKFDTPLDININDDSTLPETNPCFDVEIIDENESMNLSPSQAVGKKVFKCPHCPFFSTTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNDAKVLMTDETGRRNYSKYNKFLAMPVLNEYGENQFHYLDSNTSIDGSMEIDDSFHDMTDAMNTQYEMQPLNLQTQYDEKYDLLDNRGLNLNDIKKPKKTLWKCKKCNYKDPSKEALLEHVREHSKDGVQEELQKPSATKKSENTPDPADLAYRCGHCHQLSNWKHVIQRHCRLKHDGIIKVITTVKPKPDPVSINDITDTCNKCPYRTSDKKLLIAHLQQHQPSPQSVFKCFFCPYFVKDENELTQHLLLHGVTDPEDYISKGMEDKPNSQDQQSTSSICSTKRHRCTECPYETNSKSQYMYHEQFHRTPSDTPYKCPECNYSVSKRHLLHQHLRVHGIITKRLDVEYGLEQPSTSQKNDPEATIYEGIPYVWVSAKNEFHKMYKCRYCSYVNSIKCKIPNHEKIHFIVFENNDTTIYKCLECKFTCDNAGRLAEHSKMHGEIYGRIYCPVEEDVSDDEQIAKLRKVIEMDKGTENFFKEDGLNENREIKLLYFCHQCPARFFEDAELESHNKFHESVYPNKCNSCEFSVPEENDLATHETVHTDEYHTKTKILKFIHNSHPSHRQPRLEMAHSPTNSEIRWISVGPIIENIVTGTKKSNETKHVPKQYYCKLCPAKFFKSSALNYHAALHGGEGDHKCKTCNYAVKNIGNLAKHELLHETHNKPSNCDYESGDDMDYKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERRKDSNDFVISENQDEVKPQGSADTIKLAIKTMPKGPPKSDFQQFSISDQQTLRLLQRRRSINDSGKDLNTSETSPTKERKMHMCLLCPYTNQRQDSLTNHYRRHGDTDTLTAANHKCSHCDLVVVQSHFLREHLKTHFNFHKTLAPDCFMANEDISFTITKIDDDTSEPVDLKLDVQNKIIACKDEKMYVKISTGELLTAWEE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00795310;
90% Identity: iTF_00638257;
80% Identity: -