Hmer001138.1
Basic Information
- Insect
- Hermaeophaga mercurialis
- Gene Symbol
- retn_1
- Assembly
- GCA_951812935.1
- Location
- OX638358.1:10053141-10062247[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.5e-17 1.3e-13 52.0 0.1 29 89 4 62 1 62 0.93 2 2 1.7 6.4e+03 -1.5 0.0 25 38 217 230 176 233 0.67
Sequence Information
- Coding Sequence
- ATGGCGAAATCTGTTCTTGATCTCTATGAATTATATAATCTGGTGATAGCCCGTGGCGGATTAGTGGAtgtaattaataagaaattatgGCAAGAAATAATTAAAGGACTTCATTTACCCTCTTCCATTACGTCAGCAGCATTTACTCTTAGGACGCAatacatGAAATACCTCTACCCATATGAATGTGAAAAACGACGACTGAGCACACCAGCCGAACTCCAAGCAGCTATCGATGGCAATCGTAGAGAAGGCAGGAGAAGTAGTTATGGACAATATGACTCCATGCAAAGGTCACCTAATCCCAATCTACAGATGTCACCTCTATCTCTTGTATCTCAGCAACAGCAGCAGCAGCTTGCAGCTAGAATGATGGGTGGAGGGATCAATTTACACAACGGAGCGCATCATCCTAGTCATCCACAGCCCATGGGACAACCCCTCAACGGAGGACCCTTGCCAGCACAAAAATATGGAATGGTTCCAGAAATGTTCAAGCTGCCTCTCTTTCCAGGCTTAGCACCTAGTGAATTCGAAGCTCGCATGATGGAATACGTTAAACtcctaaataaagaaattcgCAGTTCAGCTGCAACGCCTCCACGTCAAGGCGACATTTCACCCCCTAATGCCACTTCCCCACTGAATCAACTGGAAATGTCCCGCATGAATCTTTGGAACCTTTGGAATAATAATCAACCCGCCGTAGAACCCCAAAAGGAGCCGATAAATTTGTCGGAACCGTCGTCAGGAGTGATGAAAAGGGATCCCGAAAGTAGAGAATCACCACCTCCGCCAAAAAGAGTTATAAAGGAAGAAGATAGCGATCCTGCACCAAACTCTTTGTCCCCTTCgacacatattaaaataaacagcaGAGgAGATTCCCGAAATGGTGACAATTCCCTAGTGGTTAGTATGGAACTGAATGGAGTGACCTACCAAGGGGTTCTTTTCGCCCAAAATGCCCCAAATGGTAATCGGACAGCATtaacatcttaa
- Protein Sequence
- MAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGQYDSMQRSPNPNLQMSPLSLVSQQQQQQLAARMMGGGINLHNGAHHPSHPQPMGQPLNGGPLPAQKYGMVPEMFKLPLFPGLAPSEFEARMMEYVKLLNKEIRSSAATPPRQGDISPPNATSPLNQLEMSRMNLWNLWNNNQPAVEPQKEPINLSEPSSGVMKRDPESRESPPPPKRVIKEEDSDPAPNSLSPSTHIKINSRGDSRNGDNSLVVSMELNGVTYQGVLFAQNAPNGNRTALTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00721787; iTF_01226403; iTF_00110322; iTF_01310111;
- 90% Identity
- iTF_00386971; iTF_00056332;
- 80% Identity
- -