Eads002862.1
Basic Information
- Insect
- Exocentrus adspersus
- Gene Symbol
- retn
- Assembly
- GCA_029955175.1
- Location
- JANEYG010000003.1:6327298-6335579[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.9e-21 2e-17 64.1 0.0 14 89 39 112 32 112 0.95
Sequence Information
- Coding Sequence
- ATGGGAGCCAGGGAGAAGAGGGAGGGCGCTGTTAATTATGATATTTCTGGGAACGGGAATGGTATTCGCGACACACTCAAGACGAAGGGTGCAACGACAACAGCAGGATCGAACTCAAAGCAAGgcACGCCTATCAACAGACTGCCCATAATGGCGAAATCCGTTCTTGATCTCTATGAACTGTACAATTTGGTGATAGCACGAGGTGGACTTGTAGATGTTATAAACAAGAAACTGTGGCAGGAGATAATCAAGGGGCTGCACTTACCATCCTCGATCACATCTGCCGCATTTACACTGAGGACACAATATATGAAATACTTATACCCGTACGAATGTGAGAAACGGCGGCTGAGCACCCCAGCAGAGTTGCAAGCAGCCATAGACGGGAACAGAAGGGAGGGCCGCAGGAGCAGCTACGGCCAGTACGAGTCGATGCAGAGGTCGCCTAATCCCAGCCTGCAGATGTCAGCACTGTCGTTGGTGTCGCAACAGCAGCAACAGCTGACGGCGCGTATGATGGGATCGGCGGGGATGAACCTGCACAACGGCGCTCACCACCCCAGCCACCCCCAGCCTATGGGCCAGCCGATTAATGGAGGCCCACTCCCCGGCTTGGCACCTAGCGAATTTGAGACGCGCATGATGGAGTACGTCAACCTGCTCAAAAAGGAGATGCGTAGTTCGGCAGCGACACCGCCGAGACAGGGCGACATCTCGCCACCCAACGCCACGTCACCCCTCAACCACCTCGACATGTCTCGGATGACGCTGTGGAATTTATACAATAACAACCAACCACCGGTGGAGCCGCAAAAAGAGCCGATGAACCTGTCGGAAGCCTCGACGACGGTAAAACGAGTGCCGGAGTGCAGGGAGGCGTCGCCGCCTGCGAAGAGGTTAACCAAAGAGGAGGACGAGGACATAGAACCGCCTAAGGAGAACTCGAATTCGACGCCCGCCACGCATATCAAAATCAACAGTAGAGGCGATCCTCGCAACGGCAGCGACAATTCGCTGGTGGTAAGCATGGAACTAAACGGGGTAACTTATCAAGGAGTCCTCTTCGCGCAAAATTCGCCATCTAATAACCGGACAGCCTTGACGTCTTAA
- Protein Sequence
- MGAREKREGAVNYDISGNGNGIRDTLKTKGATTTAGSNSKQGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGQYESMQRSPNPSLQMSALSLVSQQQQQLTARMMGSAGMNLHNGAHHPSHPQPMGQPINGGPLPGLAPSEFETRMMEYVNLLKKEMRSSAATPPRQGDISPPNATSPLNHLDMSRMTLWNLYNNNQPPVEPQKEPMNLSEASTTVKRVPECREASPPAKRLTKEEDEDIEPPKENSNSTPATHIKINSRGDPRNGSDNSLVVSMELNGVTYQGVLFAQNSPSNNRTALTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00791865;
- 90% Identity
- -
- 80% Identity
- -