Caur007556.2
Basic Information
- Insect
- Crepidodera aurea
- Gene Symbol
- retn
- Assembly
- GCA_949320105.2
- Location
- OX439472.1:93822224-93839939[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-20 1.6e-16 61.6 0.0 14 89 7 80 3 80 0.93 2 2 1.3 7.7e+03 -1.5 0.0 25 38 218 231 177 235 0.70
Sequence Information
- Coding Sequence
- ATGGCTGTTAGGAATATCGAAAGAATGAgaACTCCAATAAATAGACTACCAATAATGGCGAAGTCCGTTCTTGATCTCTACGAattgtacaatttggttatcgCCCGAGGTGGATTAGTGGATGTAATTAATAAGAAATTATGGCAGGAAATTATAAAAGGACTTCATTTACCCTCATCTATCACATCAGCTGCATTTACTCTTAGGACACAataTATGAAATACCTCTACCCCTACGAATGTGAAAAACGACGACTGAGCACCCCCGCTGAACTGCAAGCAGCCATAGATGGTAATCGTAGAGAGGGCAGAAGAAGCAGTTACGGTCAGTACGATTCCATGCAAAGGTCGCCCAATCCTAGTCTCCAGATGTCACCACTATCTCTAGTGTCTCAGCAACAGCAGCAACAACTAGCTGCGAGAATGATGGGAGGGGGAATCAATTTACACAATGGAGCGCATCATCCTAGTCATCCGCAGCCTTTGGGGCAGCCCATTAACGGCGGTCCGCTACCAGGCTTAGCACCTAGCGAATTCGAAGCGCGCATGATGGAATACGTCAAACTCCTCAACAAAGAAATCCGCGGCTCGGCGGCTACGCCTCCACGTCAAGGCGACGTTTCGCCTCCGAATATTACCTCCCCCCTCAATCAACTCGAAATGTCCCGTATGAACCTTTGGAATCTGTGGAATAACAATCAACCAGTAGTGGAACCTCAGAAGGAGCCTATAAATTTGTCGGAACCTTCGTCGGGAGTTATGAAAAGAGAACCCGAATGTAGGGAGTCACCACCACCTCCAAAAAGGGTTAATAAGGAGGAAGATAGTGAACCTGCGCCTAAAATTTTGTCACCTTCCACCCATATTAAGATCAACAGTAGAGGAGATTCACGAAACGGTGACAACTCCCTAGTAGTTAGTATGGAACTGAACGGAGTGACATATCAAGGTGTACTCTTCGCCCAAAATTCCCCCAACGGTAATCGGACGGCATTGGCGTCCTAA
- Protein Sequence
- MAVRNIERMRTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGQYDSMQRSPNPSLQMSPLSLVSQQQQQQLAARMMGGGINLHNGAHHPSHPQPLGQPINGGPLPGLAPSEFEARMMEYVKLLNKEIRGSAATPPRQGDVSPPNITSPLNQLEMSRMNLWNLWNNNQPVVEPQKEPINLSEPSSGVMKREPECRESPPPPKRVNKEEDSEPAPKILSPSTHIKINSRGDSRNGDNSLVVSMELNGVTYQGVLFAQNSPNGNRTALAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00755230;
- 90% Identity
- iTF_00791865;
- 80% Identity
- -