Hnig012154.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hartigia nigra
Gene Symbol
nfxl1
Assembly
GCA_031001745.1
Location
JARPRG010000625.1:404564-407281[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 1.1 9.5e+03 -3.2 1.1 15 19 126 130 125 130 0.81
2 19 0.14 1.3e+03 -0.5 0.8 4 10 161 167 160 167 0.95
3 19 7.6e-09 6.9e-05 22.8 16.0 1 19 175 192 175 192 0.99
4 19 0.0022 20 5.3 14.9 1 19 228 246 222 246 0.93
5 19 2 1.8e+04 -4.7 1.7 10 14 253 257 252 257 0.70
6 19 0.19 1.7e+03 -0.8 0.1 5 10 270 275 267 277 0.88
7 19 0.052 4.7e+02 0.9 12.0 1 19 281 300 281 300 0.91
8 19 0.00092 8.3 6.5 11.8 1 18 336 353 336 354 0.97
9 19 0.0034 31 4.7 8.0 1 12 388 399 388 399 0.94
10 19 0.81 7.2e+03 -2.9 0.8 6 10 409 413 408 413 0.91
11 19 7.9e-08 0.00071 19.5 14.0 1 19 419 437 419 437 0.93
12 19 0.78 7e+03 -2.8 0.6 5 10 465 470 465 470 0.90
13 19 0.00011 0.98 9.5 7.6 9 19 485 495 483 495 0.90
14 19 9.7e-05 0.87 9.7 5.3 1 11 505 514 505 515 0.95
15 19 0.85 7.7e+03 -2.9 5.8 14 18 547 551 547 552 0.89
16 19 0.0042 37 4.5 10.3 1 12 588 599 578 599 0.93
17 19 2 1.8e+04 -5.5 2.8 6 7 615 616 611 619 0.50
18 19 0.0036 32 4.7 14.9 3 19 628 644 627 644 0.94
19 19 8.9e-06 0.08 13.0 11.9 1 18 689 708 689 709 0.87

Sequence Information

Coding Sequence
ATGAAGAAGTTTAAGCGGGCTCAGGCCAAAAATCAGGCTTCCATCGAGAGGCATCTGGAAGCTAATAATTTGATAGAATCCTCCAGTGAGGAAGATGATGATGGAAATGAAGAACTCCTTCAGCAAGCAGTTGGCAAGGTTTTGTCCTCCTATCAGTACGAAGGAGGTGATGCTGAAAAGGCACTTTCTTACTTGATAGACACTTTCCAATCTGGTGGAGCGGTGTGCCTGATTTGTATTTCAACCATAAAGAAAACAGATGCGatttGGAATTGCAGCAAGTGCTACTCGTTTATGCATTTGCCTTGTATTCAACATTGGATTCGGGATAGCCTCAGTTACAAACATGAGAAGGGTATCACTCCTCTATGGGCTTGtccAAAATGTCGAATGGAATACCCTGAAGATGAAGTTCCAAAGCATTATGAGTGCTTTTGTGGAAAAACAAGGGATCCACCGTACCTGCCTTGGTCAATTCCACATTCTTGTGGAGAAACATGCAGCAAATTATTACAGCCAAAATGTGGTCATCGATGTATTCTTCTTTGTCACCCTGGACCTTGTCCGCCGTGCCCAAAGATGGTTTCATCAAAGTGTTACTGCGGCAAACAACCAGCACGACCACGTCGATGCAACGCCAAAGAATGGAGCTGCGGAAACATTTGTGGCAAGCAATTAAAATGTACTCAGCATAATTGCCCCATAGAATGTCATGCCAATGAGTGTCCACCATgttcagaaataattttgactgCTTGTCACTGTGGTAATAAGACGGAGGCTCGAAAATGCAATGAAGGTTCTTGGACTTGTGATAAACCTTGCGGTAACCGTCTCTCCTGTAATGTGCACGTGTGTCAAGGTGTTTGTCATCGTCCGGATGACTGCGGCGAATGTCCCATTGAACGAAATAGAAGCTGCCCTTGTGGCAAGACGCGATACATCATCTCTTGCAAGCAGGGACAAGTACCCACATGCGGTGATACCTGTGGAAAACTTCTCGATTGCGGATCACACTATTGCAACATGCGATGCCACGTTGAACACTGTGGCCAATGTTTAGAAGTAGTAACGAAGACTTGTCGTTGCGGTGCTTACAAGAAGGAACTCGCCTGCGCCAAGACTTTTCACTGCGACACGAAGTGCAAGCAGATGCGTCTCTGTGGAAGACATCCATGCAACAAAAAATGCTGTGACTGCTTAATAAAGAACAACTTTAACGCATGTGAGAAGATCTGTGATCGCACTCTGAATTGCAGAAAGCATAAGTGTGCAGCTCCTTGTCACAGTGGACCCTGTTATCCATGCCCACGGACGGATGTGAGACAGTGTCGTTGTGGAAAAAGCAAGATTATCGTTCCTTGTGGTACTGCAAAGAAAATCAAGCCGCCTAATTGCAATAAACTTTGCAAGATCCCACCGATTTGTCATCATCCAAAAAGGGAGTCGCACAAGTGCCATCAGGGTGCCTGTCCACCATGCCGCAAAGTTTGTGGACTCGCGCACAAGAAATGTGGGCATACGTGTCCAGCGATTTGCCATGCCAAAGTCTGGGTCAAGATCAAAGTAAATGGTGTGAATAGCCAGCCTGCTGGACCCTGGGAAAGACCTCAAGAGAAGATGCAATTAAAAACTCTACCGTGTCCGCCGTGCGAAGTTTCTATGATGGTGACCTGCTTGGGAGGTCATGAGACAAAACCCTGGCCATGCTATAAAGCAGTGCCCACTTCTTGTTTAAGACTGTGTGGACAACTGTTGAGCTGCACGAATCATCACTGCGAACGACTTTGTCATAAGTTACGATCGTCTGGCGATGCTGAAGAAGATACAGACTGCGAGGAATGCGAACGAGAATGCGCCTTCCCCAGACCTAAAGGTTGCAACCATCCCTGCAAGAAAAGTTGTCATCCTGCACCCTGTGATAATTGTAAGCAGCTTGTCAAGGTGTCCTGTCATTGTGGAATTAACTCGCTATTTAAAAGATGCTTTGAACTGACATCTGCTACAGCAGAACAAAAGAACGAGATGCTCAAATGTGGAAATCAATGCCCTCGAATTtatCCATGTGGTCATCGTTGCATCGACAATTGCCATCCTGGGGAGTGTCAAGGTGCGAGTGAATGCAACAAAAAGGTGAAACTGTACTGCAAGTGTAAACGTATCAAAAAGGACTTCCCCTGTGTATTAGTGCGGATGAATAAGGTGCTTGTCGAATGTGACAACGTCTGtcaggaaaagaaagaagaacgcAGAAGAATTCAGGAACTAGAGATGGAGAAAAAACGTAAGGAAGACGAAATTAGAAACCAAAAAGAGATTGAGCAGTTTGAAAGGAAATTTAATAAGTCAAGACGAAAGGGCAAGGACAAAATTCCAATGGAAGACTTGAAGAAAGATGGAAAGCGCATGTGGACAAGTATTTTCCAGGTAGTAACagtgataatattaatagctGGTCTGACAATTTATGCAACGATAAACAATTAG
Protein Sequence
MKKFKRAQAKNQASIERHLEANNLIESSSEEDDDGNEELLQQAVGKVLSSYQYEGGDAEKALSYLIDTFQSGGAVCLICISTIKKTDAIWNCSKCYSFMHLPCIQHWIRDSLSYKHEKGITPLWACPKCRMEYPEDEVPKHYECFCGKTRDPPYLPWSIPHSCGETCSKLLQPKCGHRCILLCHPGPCPPCPKMVSSKCYCGKQPARPRRCNAKEWSCGNICGKQLKCTQHNCPIECHANECPPCSEIILTACHCGNKTEARKCNEGSWTCDKPCGNRLSCNVHVCQGVCHRPDDCGECPIERNRSCPCGKTRYIISCKQGQVPTCGDTCGKLLDCGSHYCNMRCHVEHCGQCLEVVTKTCRCGAYKKELACAKTFHCDTKCKQMRLCGRHPCNKKCCDCLIKNNFNACEKICDRTLNCRKHKCAAPCHSGPCYPCPRTDVRQCRCGKSKIIVPCGTAKKIKPPNCNKLCKIPPICHHPKRESHKCHQGACPPCRKVCGLAHKKCGHTCPAICHAKVWVKIKVNGVNSQPAGPWERPQEKMQLKTLPCPPCEVSMMVTCLGGHETKPWPCYKAVPTSCLRLCGQLLSCTNHHCERLCHKLRSSGDAEEDTDCEECERECAFPRPKGCNHPCKKSCHPAPCDNCKQLVKVSCHCGINSLFKRCFELTSATAEQKNEMLKCGNQCPRIYPCGHRCIDNCHPGECQGASECNKKVKLYCKCKRIKKDFPCVLVRMNKVLVECDNVCQEKKEERRRIQELEMEKKRKEDEIRNQKEIEQFERKFNKSRRKGKDKIPMEDLKKDGKRMWTSIFQVVTVIILIAGLTIYATINN