Tiud012907.1
Basic Information
- Insect
- Trachelus iudaicus
- Gene Symbol
- nfxl1
- Assembly
- GCA_030142595.1
- Location
- JARQTH010000673.1:386243-388966[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 1.1 9.6e+03 -3.2 1.1 15 19 126 130 125 130 0.81 2 18 0.14 1.3e+03 -0.5 0.8 4 10 161 167 160 167 0.95 3 18 6.3e-08 0.00056 19.9 16.9 1 19 175 192 175 192 0.99 4 18 0.0013 11 6.1 16.4 1 19 228 246 218 246 0.93 5 18 1.5 1.3e+04 -3.7 1.0 5 10 263 268 263 268 0.91 6 18 0.28 2.5e+03 -1.4 0.3 5 10 270 275 270 277 0.89 7 18 0.053 4.7e+02 0.9 12.0 1 19 281 300 281 300 0.91 8 18 0.0012 10 6.2 12.7 1 18 336 353 336 354 0.97 9 18 0.0034 31 4.7 8.0 1 12 388 399 388 399 0.94 10 18 0.81 7.3e+03 -2.9 0.8 6 10 409 413 408 413 0.91 11 18 7.9e-08 0.00071 19.5 14.0 1 19 419 437 419 437 0.93 12 18 0.78 7e+03 -2.8 0.6 5 10 465 470 465 470 0.90 13 18 0.00011 0.99 9.5 7.6 9 19 485 495 483 495 0.90 14 18 9.7e-05 0.87 9.7 5.3 1 11 505 514 505 515 0.95 15 18 0.37 3.3e+03 -1.8 2.5 15 18 548 551 547 552 0.87 16 18 0.00039 3.5 7.7 8.0 1 12 588 599 578 599 0.93 17 18 0.0045 40 4.4 14.9 3 19 628 644 627 644 0.94 18 18 2.4e-06 0.021 14.8 10.6 1 17 689 704 689 709 0.89
Sequence Information
- Coding Sequence
- ATGAAAAAGTTCAAGCGAGCACAGGCTCAAAATCAAGCTTCTATAGTGAGGCATTTAGAAGCTAATAATTTGGTAGAATCCTCCAGTGAAGAAGATGATGATGGAAATGAAGAACTCCTTCAGAAGGCAGTTGGCAAGGTTCTGTCTTCGTATCAGTACGAAGGAGGTGATGCTGAAAAAGCACTTTCTTACCTGATAGACACCTTCCAGTCTGGTGGAGCAGTGTGCCTGATTTGCATTTCAACTGTAAAGAAAACAGATGCGATTTGGAATTGCAGTAAATGTTATTCTTTTATGCATCTCCCTTGTATTCAACATTGGATTCGAGATAGTCTTAGTTATAAACATGAGAAGGGCATCTCTCCTCTATGGGCTTGtCCAAAATGCCGAATGGAATATCCTGAAGATGAAATTCCAACCCATTACGAGTGCTTTTGTAGAAAAACAAGAGATCCATCGTATCTACCATGGTCAATTCCACATTCTTGTGGAGAAACATGCAGCAAATTATTACAGCCAAAGTGTGGTCATCGATGTGTCCTTCTTTGTCATCCTGGACCTTGTCCACCATGCCCAAAGATGGTTTCATCAAAGTGTTACTGTGGCAAACAACCAGCACGACCACGGCGATGCAATGCCAAAGAATGGAGCTGTGGAAGCGTTTGTGGCAAGAAACTGAAATGCACTCAACATAATTGTCAAATAGAATGTCATGCCAATGAATGTCCCCCATGTTCAGAAACAATTTTGATTGCCTGTCATTGTGGTAACAAGACGGAGGCTCGAAAATGCAACGAGGCCTGCTGGACTTGTGATAAACCGTGCGGTAACCGTCTCTCCTGCAATGTACACGTGTGCCAAGGTGTGTGTCATCGTCCAGATGACTGTGGCGAATGTCCCACTGAACGAAACAGAAGCTGCCCTTGTGGCAAAACACGATACATCATTTCTTGCAAGCAGGAACAAGTACCAACATGCGGTGACACTTGCGGCAAACTTCTTGATTGCGGATCGCACTATTGCAATATGCGATGCCATACCGAGCATTGTGGTCAATGTTTAGAAGTAGTAACGAAGACTTGTCGTTGCGGTGCTTATAAGAAGGAACTCGCCTGCGCCAAGACTTTTCACTGTGACACCAAGTGCAAGCAGATGCGGCTCTGTGGAAGACATCCGTGCAACAAGAAATGCTGCGACTGCCTAATAAAGAACAACTTTAATGCATGCGAGAAAATCTGTGATCGCACTTTGAATTGCAGGAAGCATAAATGCGCAGCTCCTTGTCACAGTGGACCCTGTTATCCATGCCCAAGGACGGATGTGATACAGTGTCGTTGTGGAAAAAGCAAGATCACCGTTCCTTGCGGTACTGCAAAGAAGATCAAGCCGCCTAATTGCAATAAACTCTGCAAGATCCCACCGATTTGTCATCACCCAAAAAGGGAGTCGCACAAGTGCCACCAGGGTGCCTGTCCACCGTGTCGCAAAGTTTGTGGACTCACGCATAAGAAATGTGGCCATACATGTCCAGCGATTTGCCATGCGAAAGTCTGGGTCAAGATCAAAGTCAATGGTGTGAATAGCCAGCCCGCAGGACCCTGGGAAAGACCTCAAGAAAAGATGCAATTGAAGACACTACTGTGTCCGCCGTGCGAAGTTTCTGTGATGGTGACCTGCTTGGGAGGTCATGAGACAAAACCCTGGCCATGTCATATGGCAGAACCCACTTCTTGTTTAAGACCGTGTGGACAACTGCTGACCTGCACGAATCATTACTGCGAACAACTTTGTCATAAGTTACGATCGTCCGGTGATGCTGGAGAAGATGCGGATTGCGAGGATTGCGAACGAGAATGCGCTTTCCCCAGACCTAAGGGCTGCAATCATCCTTGTAAAAAACGATGTCATCCTGCACCTTGTGACAATTGCAAGCAGCTTGTAAAAGTATCTTGTCATTGTGGAATTAACTCACTATACAAACGATGTTTTGAATTGACATCTGCGACTCCAGAACAAAAGAACGAGATGCTCAAATGTGGAAATCAATGCCCTCGAAtttatCCATGTGGTCACCGTTGCATTGACAATTGTCACCCTGGAGAGTGTCAAAGTGCCAGTGAATGCAATAAAAAGGTGAAATTATACTGCAAGTGTAAGCGAATTAAAAAGGACTTCTCTTGTGCATTAGTGCGGATCAATAAGGCGTTTGTCAATTGCGATAACATCTGtcaggagaagaaagaagaacgcAGAAGAGCCCATGAATtagagatggaaaaaaaacgtaaggaagacgaaattaaaaaccaaaaagagATCGAGCAGTTTGAAAGGAAATTTATTAAGTCAAAACGAAAGGGAAAAGACAAAATCCCAATGGAAGTCTTAAAGAAGGATAGAAGTGGACGCATGTGGACGAATATTTTCCAGGTAGTCacagtaataatattaatagctGGTCTGACAATATATGCAACAATAATCGATTAG
- Protein Sequence
- MKKFKRAQAQNQASIVRHLEANNLVESSSEEDDDGNEELLQKAVGKVLSSYQYEGGDAEKALSYLIDTFQSGGAVCLICISTVKKTDAIWNCSKCYSFMHLPCIQHWIRDSLSYKHEKGISPLWACPKCRMEYPEDEIPTHYECFCRKTRDPSYLPWSIPHSCGETCSKLLQPKCGHRCVLLCHPGPCPPCPKMVSSKCYCGKQPARPRRCNAKEWSCGSVCGKKLKCTQHNCQIECHANECPPCSETILIACHCGNKTEARKCNEACWTCDKPCGNRLSCNVHVCQGVCHRPDDCGECPTERNRSCPCGKTRYIISCKQEQVPTCGDTCGKLLDCGSHYCNMRCHTEHCGQCLEVVTKTCRCGAYKKELACAKTFHCDTKCKQMRLCGRHPCNKKCCDCLIKNNFNACEKICDRTLNCRKHKCAAPCHSGPCYPCPRTDVIQCRCGKSKITVPCGTAKKIKPPNCNKLCKIPPICHHPKRESHKCHQGACPPCRKVCGLTHKKCGHTCPAICHAKVWVKIKVNGVNSQPAGPWERPQEKMQLKTLLCPPCEVSVMVTCLGGHETKPWPCHMAEPTSCLRPCGQLLTCTNHYCEQLCHKLRSSGDAGEDADCEDCERECAFPRPKGCNHPCKKRCHPAPCDNCKQLVKVSCHCGINSLYKRCFELTSATPEQKNEMLKCGNQCPRIYPCGHRCIDNCHPGECQSASECNKKVKLYCKCKRIKKDFSCALVRINKAFVNCDNICQEKKEERRRAHELEMEKKRKEDEIKNQKEIEQFERKFIKSKRKGKDKIPMEVLKKDRSGRMWTNIFQVVTVIILIAGLTIYATIID
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00291971;
- 90% Identity
- iTF_00770786;
- 80% Identity
- -