Cbra012823.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cephus brachycercus
Gene Symbol
nfxl1
Assembly
GCA_030142315.1
Location
JARQSX010000839.1:371735-374752[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 1.1 1e+04 -3.2 1.1 15 19 126 130 125 130 0.81
2 20 0.14 1.4e+03 -0.5 0.8 4 10 161 167 160 167 0.95
3 20 6.3e-08 0.00062 19.9 16.9 1 19 175 192 175 192 0.99
4 20 0.00028 2.8 8.2 14.3 1 19 228 246 222 246 0.93
5 20 2 2e+04 -4.7 1.7 10 14 253 257 252 257 0.70
6 20 1.5 1.4e+04 -3.7 1.0 5 10 263 268 263 268 0.91
7 20 0.28 2.8e+03 -1.4 0.3 5 10 270 275 270 277 0.89
8 20 0.053 5.2e+02 0.9 12.0 1 19 281 300 281 300 0.91
9 20 0.0007 6.8 6.9 12.5 1 18 336 353 336 354 0.97
10 20 0.0034 34 4.7 8.0 1 12 388 399 388 399 0.94
11 20 0.81 7.9e+03 -2.9 0.8 6 10 409 413 408 413 0.91
12 20 7.9e-08 0.00078 19.5 14.0 1 19 419 437 419 437 0.93
13 20 0.78 7.7e+03 -2.8 0.6 5 10 465 470 465 470 0.90
14 20 0.00011 1.1 9.5 7.6 9 19 485 495 483 495 0.90
15 20 9.7e-05 0.95 9.7 5.3 1 11 505 514 505 515 0.95
16 20 0.37 3.6e+03 -1.8 2.5 15 18 548 551 547 552 0.87
17 20 1.3 1.3e+04 -3.6 0.2 9 12 569 573 569 575 0.64
18 20 0.0017 17 5.7 9.6 1 12 588 599 582 599 0.91
19 20 0.0072 70 3.7 14.5 3 19 628 644 627 644 0.94
20 20 5.9e-05 0.58 10.4 13.6 1 16 689 703 689 708 0.95

Sequence Information

Coding Sequence
ATGAAGAAGTTCAAGCGAGCACAGGCTCAAAATCAAGCTTCTATAGTGAGGCATCTAGAAGCTAATAATTTGGTAGAATCCTCCAGtgaagaagatgatgatgGAACTGAAGAACTCCTTCAGAAAGCAGTTGGCAAGGTTCTGTCTTCGTATCAGTACGAAGGAGGTGATGCTGAAAAAGCACTTTCTTACCTGATAGACACCTTCCAGTCAGGTGGAGCAGTGTGTTTGATTTGCATTTCAACTGTAAAGAAAACAGATGCGattTGGAATTGCAGCAAATGTTATTCTTTTATGCATCTGCCTTGCATTCAACATTGGATTCGAGATAGTCTTAGTTATAAACATGAGAAGGGCATCACTCCTCTATGGGCTTGtCCAAAATGTCGAATGGAATATCCTGAAGATGAAGTTCCAACCCATTACGAGTGCTTTTGTAGAAAAACAAGGGATCCATCGTATTTACCTTGGTCAATTCCGCATTCTTGTGGAGAAACATGCAGCAAATTATTACAGCCAAATTGTGGTCATCGGTGTGTCCTTCTTTGTCATCCTGGACCTTGTCCACCATGCCCAAAGATGGTTTCATCAAAGTGTTACTGTGGCAAACAACCAGCACGGCCACGGCGATGCAATGCCAAAGAATGGAGCTGTGGAAGCATTTGTGGCAAGAAACTAAAATGCACTCAACATAATTGTCAAATAGAATGTCATGCCAATGAGTGTCCCCCATGTTCAGAAACAATTTTGGTTGCCTGTCACTGTGGTAACAAGACGGAGGCTCGAAAATGCAATGAGGCTTGCTGGACTTGTGATAAACCGTGCGGTAACCGTCTCTCCTGCAATGTACACGTGTGCCAAGGTGTTTGTCATCGTCCGGATGACTGTGGCGAATGTCCCACTGAACGAAACAGAAGCTGCCCTTGTGGCAAAACACGGTACATAATTTCTTGCAAGCAGGAACAAGTGCCAACATGCGGTGACACTTGCGGCAAACTTCTTGATTGCGGATCGCACTATTGCAATATGCGATGCCATAGCGAGCATTGTGGTCAGTGTCTAGAAGTGGTAAAGAAGACTTGTCGTTGCGGTGCTTATAAGAAGGAACTCGCCTGCGCCAAGACTTTTCACTGTGACACCAAGTGCAAGCAGATGCGTCTCTGTGGAAGACATCCGTGCAACAAGAAATGCTGCGACTGCCTAATAAAGAACAACTTTAATGCATGCGAGAAAATCTGTGATCGCACTTTGAATTGCAGGAAACATAAATGCGCAGCTCCTTGTCACAGTGGCCCCTGTTATCCATGCCCAAGGACGGATGTGATACAGTGCCGTTGTGGAAAAAGCAAGATCACCGTTCCTTGTGGTACTGCAAAGAAGATCAAACCGCCTAATTGCAATAAACTCTGCAAGATCCCACCGACTTGTCATCACCCAAAAAGGGAGTCGCATAAGTGTCACCAGGGTGCCTGTCCACCATGTCGCAAAATTTGTGGACTCACGCATAAGAAATGTGGTCATACATGTCCAGCGATTTGCCATGCGAAAGTCTGGGTCAAGATCAAAGTCAATGGTGTGAATAGCCAGCCCGCAGGACCCTGGGAAAGACCTCAAGAAAAGATGCAATTGAAGACACTACTGTGTCCGCCATGCGAGGTTTCTGTCATGGTGACCTGCTTGGGAGGTCATGAGACAAAACCCTGGCCATGTCATATGGCAGGACCCACTTCTTGTTTAAGACCGTGTGGACAACTGCTGACCTGTACGAATCATCACTGCGAACAACTTTGTCATAAGTTACGATCATCCGGTGATATTGGAGACGATGCGGATTGTGAGGATTGCGAACGAGAATGCGCTTTCCCCAGACCTAAGGGTTGCAATCATCCTTGCAAAAAACGATGTCATCCTGCACCTTGTGACGATTGCAAGCAGCTTGTCAAAGTATCTTGTCATTGTGGAATTAACTCACTATATAAACGATGTTTTGAATTGACATCTGCGACTCCAGAACAAAAGAACGAGATGCTCAAATGTGGAAATCAATGCCCTCGAATTtatCCATGTGGTCATCGTTGCATCGACAATTGTCACCCTGGAGAGTGCCAAGGTGCCAGTGGATGTAATAAAAAGGTGAAATTATACTGCAAGTGTAAGCGAATTAAAAAGGACTTCTCTTGTGCATTAGTGCGAATCAATAAGGCGTTTGTCGATTGCGACAACGTCTGtcaggagaagaaagaagaacgCAGAAGAGCCCATGAAttagagatggaaaaaaaacgtaaggaagacgaaattaaaaaccaaaaagagATTGAGCAGTTTGAAAGGAAATTTATTAAGTCAAAACGAAAGGGAAAAGACAAAGTCTCAATGGAAGTCTTAAAGAAGAATGGAAGTGGACGCATGTGGACGAATATTTTACAGGTAGTCACAGTAATAATATTAGTAGCTGCTCTGACAATATATGCAACAATAACCGATTAG
Protein Sequence
MKKFKRAQAQNQASIVRHLEANNLVESSSEEDDDGTEELLQKAVGKVLSSYQYEGGDAEKALSYLIDTFQSGGAVCLICISTVKKTDAIWNCSKCYSFMHLPCIQHWIRDSLSYKHEKGITPLWACPKCRMEYPEDEVPTHYECFCRKTRDPSYLPWSIPHSCGETCSKLLQPNCGHRCVLLCHPGPCPPCPKMVSSKCYCGKQPARPRRCNAKEWSCGSICGKKLKCTQHNCQIECHANECPPCSETILVACHCGNKTEARKCNEACWTCDKPCGNRLSCNVHVCQGVCHRPDDCGECPTERNRSCPCGKTRYIISCKQEQVPTCGDTCGKLLDCGSHYCNMRCHSEHCGQCLEVVKKTCRCGAYKKELACAKTFHCDTKCKQMRLCGRHPCNKKCCDCLIKNNFNACEKICDRTLNCRKHKCAAPCHSGPCYPCPRTDVIQCRCGKSKITVPCGTAKKIKPPNCNKLCKIPPTCHHPKRESHKCHQGACPPCRKICGLTHKKCGHTCPAICHAKVWVKIKVNGVNSQPAGPWERPQEKMQLKTLLCPPCEVSVMVTCLGGHETKPWPCHMAGPTSCLRPCGQLLTCTNHHCEQLCHKLRSSGDIGDDADCEDCERECAFPRPKGCNHPCKKRCHPAPCDDCKQLVKVSCHCGINSLYKRCFELTSATPEQKNEMLKCGNQCPRIYPCGHRCIDNCHPGECQGASGCNKKVKLYCKCKRIKKDFSCALVRINKAFVDCDNVCQEKKEERRRAHELEMEKKRKEDEIKNQKEIEQFERKFIKSKRKGKDKVSMEVLKKNGSGRMWTNILQVVTVIILVAALTIYATITD