Cido012762.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Calameuta idolon
Gene Symbol
nfxl1
Assembly
GCA_030142285.1
Location
JARQSV010000736.1:294640-297365[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 1.1 1e+04 -3.2 1.1 15 19 126 130 125 130 0.81
2 19 0.14 1.4e+03 -0.5 0.8 4 10 161 167 160 167 0.95
3 19 6.3e-08 0.00059 19.9 16.9 1 19 175 192 175 192 0.99
4 19 0.0014 13 6.0 15.3 3 19 230 246 218 246 0.84
5 19 0.85 8e+03 -2.9 1.7 5 10 263 268 263 268 0.93
6 19 0.27 2.6e+03 -1.4 0.3 5 10 270 275 270 278 0.90
7 19 0.00029 2.8 8.1 12.6 1 19 281 300 280 300 0.93
8 19 0.0012 11 6.2 12.7 1 18 336 353 336 354 0.97
9 19 0.0034 32 4.7 8.0 1 12 388 399 388 399 0.94
10 19 0.81 7.6e+03 -2.9 0.8 6 10 409 413 408 413 0.91
11 19 7.9e-08 0.00074 19.5 14.0 1 19 419 437 419 437 0.93
12 19 0.78 7.3e+03 -2.8 0.6 5 10 465 470 465 470 0.90
13 19 0.00011 1 9.5 7.6 9 19 485 495 483 495 0.90
14 19 9.7e-05 0.91 9.7 5.3 1 11 505 514 505 515 0.95
15 19 0.86 8e+03 -2.9 5.8 14 18 547 551 547 552 0.89
16 19 1.3 1.3e+04 -3.6 0.2 9 12 569 573 569 575 0.64
17 19 0.0017 16 5.7 9.6 1 12 588 599 582 599 0.91
18 19 0.013 1.2e+02 2.9 15.6 3 19 628 644 627 644 0.94
19 19 8.7e-06 0.081 13.0 11.3 1 16 689 703 689 709 0.91

Sequence Information

Coding Sequence
ATGAAAAAGTTCAAGCGAGCACAGGCCCAAAATCAAGCTTCTATAGTGAGGCATCTAGAGGCTAATAATTTCGTAGAATCCTCCAGTGAGGAAGATGATGATGGAAATGAAGAACTCCTTCAGAAAGCAGTTGGCAAGGTTCTGTCTTCGTATCAGTACGAAGGAGGTGATGCTGAAAAAGCACTTTCTTACCTGATAGATACTTTCCAGTCTGGTGGAGCAGTGTGCCTGATTTGCATTTCAACTGTAAAGAAAACAGATGCGATTTGGAATTGCAGCAAATGTTATTCTTTTATGCATCTGCCTTGCATTCAACATTGGATTCGCGATAGTCTTAATTATAAACATGAGAAGGGCATCACTCCTCTATGGGCTTGtcCGAAATGTCGAATGGAATATCCTGAAGATGAAGTTCCCACGCATTACGAGTGCTTTTGTAGAAAAACAAGGGATCCATCGTATCTACCTTGGTCAATTCCACATTCTTGTGGAGAAACATGCAGCAAATTATTACAGCCAAAATGTGGTCATCGATGTGTCCTTCTTTGTCATCCTGGACCTTGTCCACCATGCCCAAAGATGGTTTCATCAAAGTGTTACTGTGGCAAACAACCAGCACGACCACGCCGATGCAATGTCAAAGAATGGAGCTGTGGAAGCATTTGTGGCAAGAAACTAAAATGCATTCAACATAATTGTCAAATAGAATGTCATGCCGATGAGTGTCCACCTTGTtcagaaacaatttttattgcctGTCACTGTGGTAACAAGACGGAGGCTCGAAAATGCAACGAAACTTGCTGGACTTGTGATAAACCGTGCGGTAACCGTCTCTCCTGCAATGTACACGTATGCCAAGGTGTTTGTCATCGTCCAGGTGACTGTGGCGAATGTCCCATTGAACGAAACAGAAGCTGCCCTTGTGGTAAGACACGGTACATTATTTCTTGCAAGCAGGAACAAGTACCAACATGCGGTGACACTTGCGGCAAACTTCTTGATTGCGGATCGCACTATTGCAATATGCGATGCCATACCGAGCACTGTGGTCAGTGTCTAGAAGTGGTAACGAAGACTTGTCGTTGCGGTGCTTATAAGAAGGAACTCGCCTGTGCCAAGACATTTCACTGTGACACCAAGTGCAAGCAAATGCGTCTCTGTGGAAGACACCCGTGCAACAAGAAATGCTGCGACTGCCTATTAAAGAACAACTTTAATGCATGCGAGAAAATCTGTGATCGCAATTTGAATTGCAGGAAGCATAAATGCGCAGCTCCATGTCACAGTGGACCCTGCTATCCATGCCCAAGGACGGATGTAATACAGTGTCGTTGTGGAAATAGCAAAATCACCGTTCCTTGTGGTACTGCAAAGAAGATCAAGCCACCTAATTGCAATAAACTCTGCAAGATCCCACCGATTTGTCATCACCCAAAAAGGGAGTCGCATAAGTGTCACCAAGGTGCCTGCCCACCGTGTCGCAAAGTTTGTGGACTCACGCATAAGAAATGTGGCCATACATGTCCAGCGATTTGCCATGCGAAAGTCTGGGTAAAGATCAAAGTCAATGGCGTGAATAACCAGCCCGCAGGACCCTGGGAAAGACCTCAAGAAAAGATGCAATTGAAGACATTACCGTGTCCGCCGTGCGAAGTTTCTGTGATGGTGACCTGCTTGGGAGGTCATGAGACAAAACCCTGGCCATGTCACATGGCCGGACCCACTTCTTGTTTAAGACCGTGTGGACAACTGTTGACCTGCACAAATCATCACTGCGAACAACTTTGTCATAAGTTACGATCGTCCGGTGATTCTAGGGAAGATGCGGATTGCGAGGATTGCGAACGAGAATGCGCTTTCCCCAGACCTAAGGGTTGCAATCATCCTTGTAAAAAACAATGTCATCCTGCACCTTGTGACAATTGCAAGCAGCTTGTCAAAGTATCTTGTCATTGTGGAATTAATTCACTATACAAACGATGTTTTGAATTGACATCTGCGACTCCAGAGCAAAAGAACGAGATGCTCAAATGTGGAAATCAATGTCCTCGAATTTATCCATGTGGTCATCGTTGCATCGACAATTGCCACCCTGGAGAGTGCCAAGGTGCCAATGATTGCAATAAAAAGGTGAAACTATACTGCAAGTGTAAGCGAATTAAAAAGGACTTCTCTTGTGCATTAGTGCGGATCAATAAGGCGTTTGTCGATTGCGACAACGTCTGtcaggaaaagaaagaagaacgcAGAAGAGCTCATGAATTAGAGATGGAGAAAAAACGTAAGGAAGACGAAATTAAAAACCAAAAAGAGATTGAGCAGTTTGAAAGGAAATTTATCAAGTCAAAACGAAagggaaaagataaaatcCCAATGGAAGTCTTAAAGAAGGATGGAAGTGGACGCATGTGGATGAATATTTTCCAGGTAGTCACAGTAATAATATTAGTAGCTAGTCTAACGATATATGCAACAATAACCGATTAG
Protein Sequence
MKKFKRAQAQNQASIVRHLEANNFVESSSEEDDDGNEELLQKAVGKVLSSYQYEGGDAEKALSYLIDTFQSGGAVCLICISTVKKTDAIWNCSKCYSFMHLPCIQHWIRDSLNYKHEKGITPLWACPKCRMEYPEDEVPTHYECFCRKTRDPSYLPWSIPHSCGETCSKLLQPKCGHRCVLLCHPGPCPPCPKMVSSKCYCGKQPARPRRCNVKEWSCGSICGKKLKCIQHNCQIECHADECPPCSETIFIACHCGNKTEARKCNETCWTCDKPCGNRLSCNVHVCQGVCHRPGDCGECPIERNRSCPCGKTRYIISCKQEQVPTCGDTCGKLLDCGSHYCNMRCHTEHCGQCLEVVTKTCRCGAYKKELACAKTFHCDTKCKQMRLCGRHPCNKKCCDCLLKNNFNACEKICDRNLNCRKHKCAAPCHSGPCYPCPRTDVIQCRCGNSKITVPCGTAKKIKPPNCNKLCKIPPICHHPKRESHKCHQGACPPCRKVCGLTHKKCGHTCPAICHAKVWVKIKVNGVNNQPAGPWERPQEKMQLKTLPCPPCEVSVMVTCLGGHETKPWPCHMAGPTSCLRPCGQLLTCTNHHCEQLCHKLRSSGDSREDADCEDCERECAFPRPKGCNHPCKKQCHPAPCDNCKQLVKVSCHCGINSLYKRCFELTSATPEQKNEMLKCGNQCPRIYPCGHRCIDNCHPGECQGANDCNKKVKLYCKCKRIKKDFSCALVRINKAFVDCDNVCQEKKEERRRAHELEMEKKRKEDEIKNQKEIEQFERKFIKSKRKGKDKIPMEVLKKDGSGRMWMNIFQVVTVIILVASLTIYATITD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00291971;
90% Identity
iTF_00770786;
80% Identity
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