Tsti012737.1
Basic Information
- Insect
- Trachelus stipa
- Gene Symbol
- nfxl1
- Assembly
- GCA_036026315.1
- Location
- JAYRCB010000756.1:361710-364431[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 1.1 1.4e+04 -3.2 1.1 15 19 126 130 125 130 0.81 2 19 0.14 1.9e+03 -0.5 0.8 4 10 161 167 160 167 0.95 3 19 6.3e-08 0.00084 19.9 16.9 1 19 175 192 175 192 0.99 4 19 0.00016 2.2 9.0 13.7 1 19 228 246 222 246 0.94 5 19 1.5 2e+04 -3.7 1.0 5 10 263 268 263 268 0.91 6 19 0.28 3.7e+03 -1.4 0.3 5 10 270 275 270 277 0.89 7 19 0.091 1.2e+03 0.2 12.0 1 19 281 300 281 300 0.91 8 19 0.0012 15 6.2 12.7 1 18 336 353 336 354 0.97 9 19 0.0034 46 4.7 8.0 1 12 388 399 388 399 0.94 10 19 0.69 9.2e+03 -2.6 0.9 6 10 409 413 408 413 0.89 11 19 7.9e-08 0.0011 19.5 14.0 1 19 419 437 419 437 0.93 12 19 0.78 1e+04 -2.8 0.6 5 10 465 470 465 470 0.90 13 19 0.00011 1.5 9.5 7.6 9 19 485 495 483 495 0.90 14 19 9.7e-05 1.3 9.7 5.3 1 11 505 514 505 515 0.95 15 19 0.37 4.9e+03 -1.8 2.5 15 18 548 551 547 552 0.87 16 19 0.0045 61 4.3 11.0 1 12 588 599 578 599 0.93 17 19 0.0045 60 4.4 14.9 3 19 628 644 627 644 0.94 18 19 5.9e-05 0.79 10.4 13.6 1 16 689 703 689 708 0.95 19 19 1.2 1.6e+04 -3.4 0.3 5 10 738 743 738 743 0.86
Sequence Information
- Coding Sequence
- atgaaaaagttCAAGCGAGCACAGGCTCAAAACCAAGCTTCTATAGTGAGGCATCTAGAAGCTAATAATTTGGTAGAATCCTCCAGtgaagaagatgatgatggAAATGAAGAACTCCTTCAGAAGGCAGTTGGCAAGGTTCTGTCTTCGTATCAGTACGAAGGAGGTGATGCTGAAAAAGCACTTTCTTACTTGATAGATACCTTCCAGTCTGGTGGAGCAGTGTGCCTGATTTGCATTTCAACTGTAAAGAAAACAGATGCAATTTGGAATTGCAGCAAATGTTATTCTTTTATGCATCTGCCTTGCATTCAACATTGGATTCGAGATAGTCTTAGTTATAAACATGAGAAGGGTATTTCTCCTCTGTGGGCTTGtCCAAAATGTCGAATGGAATATCCTGAAGATGAAGTTCCAACCCATTACGAGTGCTTTTGTAGAAAAACAAGAGATCCATCATATCTACCATGGTCAATTCCGCATTCTTGTGGAGAAACATGCAGCAAATTATTACAGCCAAAGTGTGGTCATCGATGTGTCCTTCTTTGTCATCCTGGACCTTGTCCACCATGCCCAAAGATGGTTTCATCAAAGTGTTACTGTGGCAAACAACCAGCACAACCACGTCGATGCAATGCCAAAGAATGGAGCTGTGGAAGCATTTGTGGCAAGAAACTAAAATGCGCTCAACATAATTGTCAAATAGAATGTCATGCGAATGAATGTCCCCCATGTTCAGAAACAATTTTGATTGCCTGTCACTGTGGTAACAAGACGGAGGCTCGAAAATGCAACGAGGCTTGCTGGACTTGTGATAAACCGTGCGGTAACCGTCTCTCCTGCAATGTGCACGTGTGCCAAGGTGTGTGTCATCGTCCGGATGACTGTGGCAAATGTCCCACTGAACGAAACAGAAGCTGCCCTTGTGGCAAAACACGGTACATCATTTCTTGCAAGCAGGAACAAGTACCAACATGCGGTGACACTTGCGGCAAACTTCTTGATTGCGGATCGCACTATTGCAATATGCGATGCCATACCGAGCATTGTGGTCAGTGTCTAGAAGTGGTAACGAAGACTTGTCGTTGCGGTGCTTATAAGAAGGAACTCGCCTGCGCCAAGACGTTTCACTGCGACACCAAGTGCAAGCAGATCCGTCTCTGTGGAAGACATCCGTGCAACAAGAAATGCTGCGACTGCCTAATAAAGAACAACTTTAATTCATGCGAGAAAATCTGTGATCGCACTTTGAATTGCAGGAAGCATAAATGCGCAGCTCCTTGTCACAGTGGACCCTGTTATCCATGCCCAAGGACGGATGTGATACAGTGTCGTTGTGGAAAAAGCAAGATCACCGTTCCTTGCGGTACTGCAAAGAAGATCAAGCCACCTAATTGCAATAAACTCTGCAAGATCCCACCGATTTGTCATCACCCAAAAAGGGAGTCGCACAAGTGCCACCAGGGTGCTTGTCCACCGTGTCGCAAAGTTTGTGGACTCACGCATAAAAAATGTGGCCATACATGTCCAGCGATTTGCCATGCGAAAGTTTGGATCAAAATCAAAGTCAATGGTGTGAATAGCCAGCCCGCAGGACCCTGGGAAAGACCTCAAGAAAAGATGCAATTGAAGACATTACTGTGTCCGCCGTGCGAAGTTTCTGTGATGGTGACCTGTTTGGGAGGTCACGAGACAAAACCCTGGCCATGTCATATGGCAGAACCCACTTCTTGTTTAAGACCGTGTGGACAACTGCTAACCTGCACGAATCATCACTGCGAACAACTTTGTCATAAGTTACGATCATCCGGTGATATTGGAGAAGATACGGGTTGCGAGGATTGCGAACGAGAATGCGCTTTCGCCAGACCTAAGGGTTGCAATCATCCTTGCAAAAAACGATGTCATCCTGCACCTTGTGACAATTGCAAGCAGCTTGTAAAAGTATCTTGTCATTGTGGAATTAACTCACTATACAAACGATGTTTTGAATTGACATCTGCGACTCCAGAACAAAAGAACGAGATGCTCAAATGTGGAAATCAATGCCCTCGAATTtatCCATGTGGTCATCGTTGCATTGACAATTGTCACCCTGGAGAGTGCCAAGGTGCCAGTGGGTGCAATAAAAAGGTGAAATTATACTGCAAGTGTAAGCGAATTAAAAAGGACTTCTCTTGTGCATTAGTGCGGATCAATAAGGCGTTTGTCAATTGCGACAACGTCTgtcaggagaaaaaagaagaacgcAGAAGAGCCCATGAATTAGAGGTGGAGAAAAAACGTAAGGAAGACgaaattaaaaaccaaaaagagATTGAGCAGTTTGAAAGGAAATTTGTTAAGTCAAAACGAAAGGGAAAAGACAAAATCCCAATGGAAGTGTTAAAGAAGGATGGAAGTGGACGAATGTGGACGAATATTTTCCAGGTAGTCacagtaataatattagtaGCTAGTCTGACAATATATGCAACAATAATCGATTAG
- Protein Sequence
- MKKFKRAQAQNQASIVRHLEANNLVESSSEEDDDGNEELLQKAVGKVLSSYQYEGGDAEKALSYLIDTFQSGGAVCLICISTVKKTDAIWNCSKCYSFMHLPCIQHWIRDSLSYKHEKGISPLWACPKCRMEYPEDEVPTHYECFCRKTRDPSYLPWSIPHSCGETCSKLLQPKCGHRCVLLCHPGPCPPCPKMVSSKCYCGKQPAQPRRCNAKEWSCGSICGKKLKCAQHNCQIECHANECPPCSETILIACHCGNKTEARKCNEACWTCDKPCGNRLSCNVHVCQGVCHRPDDCGKCPTERNRSCPCGKTRYIISCKQEQVPTCGDTCGKLLDCGSHYCNMRCHTEHCGQCLEVVTKTCRCGAYKKELACAKTFHCDTKCKQIRLCGRHPCNKKCCDCLIKNNFNSCEKICDRTLNCRKHKCAAPCHSGPCYPCPRTDVIQCRCGKSKITVPCGTAKKIKPPNCNKLCKIPPICHHPKRESHKCHQGACPPCRKVCGLTHKKCGHTCPAICHAKVWIKIKVNGVNSQPAGPWERPQEKMQLKTLLCPPCEVSVMVTCLGGHETKPWPCHMAEPTSCLRPCGQLLTCTNHHCEQLCHKLRSSGDIGEDTGCEDCERECAFARPKGCNHPCKKRCHPAPCDNCKQLVKVSCHCGINSLYKRCFELTSATPEQKNEMLKCGNQCPRIYPCGHRCIDNCHPGECQGASGCNKKVKLYCKCKRIKKDFSCALVRINKAFVNCDNVCQEKKEERRRAHELEVEKKRKEDEIKNQKEIEQFERKFVKSKRKGKDKIPMEVLKKDGSGRMWTNIFQVVTVIILVASLTIYATIID
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00291971;
- 90% Identity
- iTF_00770786;
- 80% Identity
- -