Basic Information

Gene Symbol
ARID5B
Assembly
GCA_001263275.1
Location
NW:1326466-1447539[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.1e-24 9.9e-21 73.1 0.0 1 89 257 343 257 343 0.95

Sequence Information

Coding Sequence
ATGGACAGCCGGGGGCCTAATCAACCCCTGGCGTCTTTGCGGCTCTACTTTTTGCCGGAGAACACCCCGGATGGACGAAGGGACACGCACGGAGAGGACGAAGTGCTGACGATATCAGAAAAGGTGGTGGTCCGCGTCCACGACCTGGTCACATGGTTATCGCCCACGCTGGAATGGTCATGGGGTCGGGAGGTATCTTACCCATCGACACCGACGTCCTCACCGGAGTGCAGCCCGCTAAGGTACGAGATACCTCAACCACAAGTGCTCACCGACCCTGGCATCGATTTCTCAGACGTCGATAAGCAACAGAAGGAATACGAAAGCAATCATAGCACGAGGAAAACAGATTGTACCTCCCAGACGAAGGTGGTGGTGCTCTCGTACCCCAGGTACTGTCGATATCGAGCGCTGCTACGTAGGCTCGAAGGTGCCGAACCGTCCTGGCTTTGCTCGTCTATAGCGGCTGCTCTGGGTGGATTTACCGCCACACCGGGTACCAGGATACTCTTCTGCAGAGACACCTTCGACTATCCAGATCTGGAGACTCACGAACTTCTTTGCAACCATCTAGCGCCAAAATTAAAAGGACGACCGCGGAGGAAACGCAAAAAGCGCAGCGCGTCGCCAGGTGAATCGAGCAACGAGAGCGAGGCCTCTGTCGCATCCACCTCGAAGAGCGTGCCAGCAAGTTCGAACGTCGTGGTACCAAGCGTTGGCAGGCCGCCCTCGTCGGTGGTTCGACGGAGCGAGCGGAAAACTAGCGCGGAGGAAAAGAAGTTCCTCACGGACGTGCAGAATTTCATGAACTCGCGGGGTACGCCTGTCGGAAAGATGCCACTGCTGGGCTACAGGCAGATTGATCTCTTTCTGTTTTATACGAAAGTGCAAATGCTCGGTGGCTACGACTCTGTCAGCGCTGGTCGACTTTGGAAGAACATCTACGACGATATAGGTGGTAACACCGGATCTACCAGCGCTGCCACAATCACTCGTCGACATTACGAAAGGTTGCTGTTACCCTATGAAAGGTATCAAAGGGGAGAAGAAGCAAAAGTTAGACTGACACACGGAAGACGGACTAAGAGTAGCAGTGTATCCGAGGAGTCTGAGGATGTTAAgcaagaaacgaacgaacaatATCCATCAGAAACGCCTCCATCTGTGGAAACGAGTCTCAGTCTTACCGCTGCTACTCCTCCCCTTCAACTAATTTTGTCGACAACACCGTTCTATTCAGGCGAAAAACCCAAGTCAGATAGTGTCAAGACCTCGTCTCTGCGTAGCGTACGAGTAAAGCCAGAACGGCTGAAATCATTAAACACCATGATCGCCAATAGTACACCATCACCCAGCCAGCAAGCCAGCCAACTGCCAAGTCCACCACCCTCTTCTAATACGTCAATTTCAACACCAAGCAGTACACCCTCCACCACACCCACGAATGGTACTGGAAGTCAAAGCGTGTTAGAGAGGCAGCTGAACAGTCCTCTGATATCGCAACAAGTACCACCGTCGTGTTCGCCGCCGGCTCTACCGGTAACCACAGTGGCAACGAATGCTCCTACAGTAGTAACATTAACGCCTCCGCCGGAGAAAGACATGAAGGAAATCAAACTGGATCCTAAACAGACCACCCTGCTGGCACAGGGCAAGGAGAACATCCCGTTGTTTGGCGAGAAGTCCATTTTCGCGGAGAAGGCGATAGTACCTCCGAGATCACCAGAGGTGATCGATTTAGAGACGGAGAGCGACACAAGTAGGGATAAGATAATCATTCCCAGTTTCAAGAAGCGTAAGTTGGAGATCCTTCGTGAGGGTGGCCTCGAAGTCACTGCCGTTGACCTAGACACGCGGCCCAGTGTGATCCAAAGCAATCCCCCTGCTCCGGCGACCATGAAGTCCGAGGAAAAACCGCCAATATCCTACCCTCTTCCAGTCACGCCTAATTCCATTCCTAAACTAATTTCCGTCACCGTGACACCTGACATCGGGCACATGTTGTCTTCACTTCAAGAACACCAGCATCCTCATCATCAAGCACGGTTACCAACACCGAACAAGCAACCTCCAGctcataataataataataatagtaataataataataataataataataatatgatGAATAACAACATGGTGAACAGCCGTGTGATAAACCTTGGTACTTCGAACAACGCGGCATTGTTACAATTGTACGCGAACGCGAACGTTCCGCCTccgacgtcgtcgtcgatgCACCATCAAGCAAATCATCGTTTCGTACCGCCAACTGTATCTAATGGTAGGATATTTCCGCCTAAAGTGACACAGTCGAGGTCGATATTCGCACACAACGAAAAGACGGTTTACGGTGATCCTAAAGAGATCCCCGTCCCTCCAAAGTATCGTCTCTCGCTGCAACACCGTCTGCAGCCCCATCAGTTACACAATAATAATGACCCGGCGTACGGTGTTCTCGACTTGACGCAAAAATCGGCCGACAAGCCGGTGTTCCCGAGGCCGAGCCTAGAAATAGTAAAAGTACCTGTAGTGCCGAGGCCTAACCCACTCAACCTGGAGATGAGGAACTCGTCCACGATCAAAGAGAAACCAACAGACTGTTCAAAACGAAGTACCTTTCCTGGTTACCAGAACGTGCTCGACAGTCGAACCATGGCTTCGAATAACCTGGAGATCACTATCGTGAACCCTAAGCAGAAGAACAATCACATAGGTGTACCGCCGCCCCCACACGTGCGTGTGCCGAGTCCACCTAGGAACAATTCGATACCTATGCAAAGAAGGCAACAGTTGAACGGCAAGTATACGACGAGGAGCGAACCAGTCTCACCCTACACACCCAGGAAGCCCAGTCACCCTGTTATACCCAACGTACCTAACCTAAATCACCTAAACAGTGCGAGCTACCCTAGAATGGCAACTATGCAACAACAGAATACCATCGACAGGAGAAAAAACACGGAAATGAGCGGAATCAAGGAGCAGCATCAACATCATTCGCACCACCAACACCATCAGCATCAACATCAACATCAACATCAACATCAACAACAGCAGCGGCGAATCAGCGAGGGCGACAAGTCGTTGTTCAcgcagcaacaacagcagcagcagccacaacagcaacaacaggAACCCAGGCAAACGGAGGCTGGAAGACGACACAGTGTTCCAAGTATACCCTCTGGTTTTGTGCCTGCGGTACCACAAAATAATCCAGCCTTCCTCCCGCAACTGCCAAACACGACCGGCAAGTTCCTACCGATTTTGGACCCCATGTACTATTCCGCATTCTACAACGGTTTATTCCCGCCGCCGATTCCGCCCACGGCCGCCACGTCGTTCTTACCGCCGGAATTCAGCGCATACTACAAAGAATTAATCGCTTCCTCGCAACCAAGACTGGGGATGGCGGGGCAGCATCAGCCGGCTGCCCCAACGTCTAAGTAG
Protein Sequence
MDSRGPNQPLASLRLYFLPENTPDGRRDTHGEDEVLTISEKVVVRVHDLVTWLSPTLEWSWGREVSYPSTPTSSPECSPLRYEIPQPQVLTDPGIDFSDVDKQQKEYESNHSTRKTDCTSQTKVVVLSYPRYCRYRALLRRLEGAEPSWLCSSIAAALGGFTATPGTRILFCRDTFDYPDLETHELLCNHLAPKLKGRPRRKRKKRSASPGESSNESEASVASTSKSVPASSNVVVPSVGRPPSSVVRRSERKTSAEEKKFLTDVQNFMNSRGTPVGKMPLLGYRQIDLFLFYTKVQMLGGYDSVSAGRLWKNIYDDIGGNTGSTSAATITRRHYERLLLPYERYQRGEEAKVRLTHGRRTKSSSVSEESEDVKQETNEQYPSETPPSVETSLSLTAATPPLQLILSTTPFYSGEKPKSDSVKTSSLRSVRVKPERLKSLNTMIANSTPSPSQQASQLPSPPPSSNTSISTPSSTPSTTPTNGTGSQSVLERQLNSPLISQQVPPSCSPPALPVTTVATNAPTVVTLTPPPEKDMKEIKLDPKQTTLLAQGKENIPLFGEKSIFAEKAIVPPRSPEVIDLETESDTSRDKIIIPSFKKRKLEILREGGLEVTAVDLDTRPSVIQSNPPAPATMKSEEKPPISYPLPVTPNSIPKLISVTVTPDIGHMLSSLQEHQHPHHQARLPTPNKQPPAHNNNNNSNNNNNNNNNMMNNNMVNSRVINLGTSNNAALLQLYANANVPPPTSSSMHHQANHRFVPPTVSNGRIFPPKVTQSRSIFAHNEKTVYGDPKEIPVPPKYRLSLQHRLQPHQLHNNNDPAYGVLDLTQKSADKPVFPRPSLEIVKVPVVPRPNPLNLEMRNSSTIKEKPTDCSKRSTFPGYQNVLDSRTMASNNLEITIVNPKQKNNHIGVPPPPHVRVPSPPRNNSIPMQRRQQLNGKYTTRSEPVSPYTPRKPSHPVIPNVPNLNHLNSASYPRMATMQQQNTIDRRKNTEMSGIKEQHQHHSHHQHHQHQHQHQHQHQQQQRRISEGDKSLFTQQQQQQQPQQQQQEPRQTEAGRRHSVPSIPSGFVPAVPQNNPAFLPQLPNTTGKFLPILDPMYYSAFYNGLFPPPIPPTAATSFLPPEFSAYYKELIASSQPRLGMAGQHQPAAPTSK