Basic Information

Gene Symbol
ARID5B
Assembly
GCA_036983795.1
Location
CM072792.1:9956106-9964525[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.2e-23 4.8e-20 72.3 0.0 1 89 261 347 261 347 0.95

Sequence Information

Coding Sequence
ATGGAGTGCACGGAACAGAGCGAGCACGAGTACCGACCGGAAGCTGGACGAAGACAGGGAAGTAGGACGGATGCCGTAACAAGTAAGAGAGAAGCAAGATCTTCTGACGAGGTGTTGACGATATCCGAGAAGGTGGTGGTCCGCGTTCACGATCTCGTCACGTGGTTATCGCCAAGCTTGGAATGGTCATGGGGTCGGGAGGTGTCTTACCCACCGACGCCCACGTCGTCCCCGGAGAACAGCCCGTTGAGGTACGAGATACCTCAGCCCCAGGTGCTCACAGATCCTGGCATCGATTTCTCGGATATCGAGAAGCAACAGAAGGAGTTCGAGAGCAACCACAACACGAGGAAGATGGAGTACGGCGCCCAAACGAAAGTGGTGGTGCTCTCGTACCCCAGGTACTGTCGATATCGAGCCCTTCTACGTAGACTCGAAGGTGCCGAACCGTCCTGGCTTTGCTCGTCCATAGCAGCCGCCCTGGGTGGATTCACCGCCACACCGGGTACCAGAGTGCTCTTCTGCAGAGACACCTTCGACTATCCGGACCTAGAAACTCACGAGCTACTCTGCAATCATCTAGCGCCGAAATTAAAGGGACGGCCGAGGAGAAAGCGTAAAAAGCGCAGCGCATCACCGGGCGAGTCGAGCAACGAGAGCGAAGCCTCGGTGGCGTCTACCTCGAAGAGCGCACCGGCGACGAGTTCGAGCATGGTAGTGCAAAACGTGGGTAGGCCACCCTCGTCGGCTGTTCGACGAAGCGAGAGGAAAACGAGCGCGGAGGAGAAGAAGTTCCTCACGGACGTGCAGAATTTCATGAACTCGCGGGGTACGCCTGTCGGAAAGATGCCACTGCTGGGCTACAGGCAGATCGACCTCTTCCTGTTTTACACGAAGGTCCAATTATTGGGTGGTTACGACTCGGTCAGCGCGGGTCGATTATGGAAGACCATCTACGACGATATCGGTGGTAACACGGGCTCTACCAGCGCCGCGACAATCACTCGTCGACATTACGAAAGGTTACTGTTGCCTTACGAGAGGTATCAGAGGGGCGCGGATGCAAAAGTCAAGCTGACTCACGTTAGGCGCGCGAAAAGTAATAGCGCGTCCGACGAGTCCGAGGATGCGAAGCAAGAACCGAACGATCCGTATCCACCGGAAACGCCTCCTCCCGTAGAAACGAGCCTTACCGCCGTAACTTCTCCTCTTCAACCTCTTATATCGTCGACAGTAAGTGTCCCCTTCCTGCCGGGCGAGAAACCGAAAACGGAAACCAGCAAGACGTCGTCGTTACGTAGCGTACGAGTGAAACCGGAACGGTTAAAATCGTTGAACACGATAATCGCCAACAGCACGTCGTCGCCTAGCCAGCAAGCCAACCAACTGCCAAGTCCGCCACCTTCCTCGAACACGTCGATCTCGACACCGAGCAGTACACCCTCCACAACACCCACGAACGGTACCGGAAGTCAAAGCGTTCTGGAGAGGCAACTGAACAGTCCTCTGATATCGCAACAAGTACCACCGTCGTGTTCGCCGCCGGGTCTACCGGTCACCACAGTAGCGACGAATGCCTCTACGGTCGTCACGCTGACTCCGCCACCGGAGAAGGATATGAAAGAGCTGAAGTTAGATTCGAAACAAACCACCCTGCTGGCACAGGGTAAGGAGAACATACCCTTGTTCGGAGAGAAGTCTATATTCGCCGAGAAAGCGATAGTGCCTCCCAGGTCGCCAGAGGTGATCGACCTCGAGACGGAGAGCGACACGAGTAGGGACAAAATAATCATTCCCAGTTTCAAGAAACGCAAGCTCGAGATACTTCGCGAGGGTGGTCTCGAAGTCACTGCCGTTGATCTGGACACGCGACCGAGCGTGATCCAAAGCAATCCTCCGGCTCCAGCGACCATGAAGTCCGAGGAAAAGCCGCCAATATCTTATCCGCTTCCAGTAACGCCTAACTCCATTCCCAAGTTGATTTCCGTCACCGTGACACCGGACATCGGTCATATGTTGTCGTCGCCGCAAGAGCACCAGCATTCTCATCATCAAGCACGATTACAAACGCAGAATAAACCGCCTCCCGTTCATCATCATCATAccaacaataacaacaacaacaataacaacaacgTCACGACGAATAACAACAACACGGTGAACAGCCGCGTGATAAACCTCGGCACTTCGAACAACACGGCGTTGTTGCAATTGTACGCGAACGCGAACGTACCGCCACCTAGGTCGTCGACGGTACCCCGTCGATTCGGGTGGCCGAGTCACCTCAGCCACGACGTTGTTCCGCCCAGGGTGACGCAGTCCAGGTCGATATTCGCACACAACGAAAAGATGGTTTACGGAGACCCGAAAGATATTCTCATCCCTCCAAAGTATCGTCCTTCGTTGCAGCGTTTGCAGTTGCAGCTGCAGCAGATGCACGCGAACCACGATCCAACGCACACCGGGATCCTCGACCTGACGCAGAGGTCCAACGACAAGTCGGTGTTCCCGAGACCGAGCCTAGAAATAGTGAAAGTACCTGTAGTGCCGAGGCCTAATCCGTTGAATCTGGAAATGAGGAACTCGTCCGCGATCAAAGAGAAACCGACGGACTACTCGAAACGAAATACCTTCCCCGCTTACCAGAACGTGCTCGACGGTCGAACGATGGCTTCGAACAACCTGGAGATCACGATCGTCGGTCCCAAGCAGAAGCATAATCACGCGAACGGGCCGACGTCGCACGTGCGGATACCGAGTCCGCACAGGAACAATGTCCTGCCCGTTCAAAGAAGGCAGCACATGAACGGCAAGTACACGACGAGGAGCGAGCCAGTTTCACCGTATACGCCCAGGAAACCGAGTCATCCCGTCATACCTAACGTACCTAACCTGAATCACTTGAACTGCGCCAATTCCTATCCGAGGATGGCGTCGATGCAACACCAGAACACGATCGACAGGAGAAAAAACGTGGATATGGGCGGTAACAAAGAGCAACATCAGCACCAGCATCAGCACCAGCAGCACCAGCACCAACACCAACACCAACACCAACACCAACACCAACATCAACATCAACATCAACATCAACACCAACACCAACATCAACACCAACACCAACATCAGCATCatcaacagcagcagcagcgtCGAATCAGCGAAGGCGACAAGTCGTTGATGAaccagcagcaacaacagcagcagcagcagcagcaacaacaacaacaacaacaacaacaacaacaacaacaacaccagCAACAGCAACCAGAATCTAGGCACCAGGATGTCGGCAGACGACACAGTGTTCCAAGCATACCGTCGGGTTTCGTTCCTGGTGTGCCGCAAAACAATCATCCAGCCTACGTTCCCCAACTGCCAAACGCACCCGGCAAGTTCCTACCGATTCTGGATCCCATGTATTATTCCGCCTTCTACAACGGCTTGTtcccgccgccgccgccgatTCCGCCCACGGCTGCTGCCACCAACTTTTTACCGCCAGAGTTCAGCGCGTACTACAAAGAACTACTTGCTTCCTCGCAACCAAGACTGGGGATGACGGGACAGCATCAGCCGGCTGCCCCGACGTCTAAATAG
Protein Sequence
MECTEQSEHEYRPEAGRRQGSRTDAVTSKREARSSDEVLTISEKVVVRVHDLVTWLSPSLEWSWGREVSYPPTPTSSPENSPLRYEIPQPQVLTDPGIDFSDIEKQQKEFESNHNTRKMEYGAQTKVVVLSYPRYCRYRALLRRLEGAEPSWLCSSIAAALGGFTATPGTRVLFCRDTFDYPDLETHELLCNHLAPKLKGRPRRKRKKRSASPGESSNESEASVASTSKSAPATSSSMVVQNVGRPPSSAVRRSERKTSAEEKKFLTDVQNFMNSRGTPVGKMPLLGYRQIDLFLFYTKVQLLGGYDSVSAGRLWKTIYDDIGGNTGSTSAATITRRHYERLLLPYERYQRGADAKVKLTHVRRAKSNSASDESEDAKQEPNDPYPPETPPPVETSLTAVTSPLQPLISSTVSVPFLPGEKPKTETSKTSSLRSVRVKPERLKSLNTIIANSTSSPSQQANQLPSPPPSSNTSISTPSSTPSTTPTNGTGSQSVLERQLNSPLISQQVPPSCSPPGLPVTTVATNASTVVTLTPPPEKDMKELKLDSKQTTLLAQGKENIPLFGEKSIFAEKAIVPPRSPEVIDLETESDTSRDKIIIPSFKKRKLEILREGGLEVTAVDLDTRPSVIQSNPPAPATMKSEEKPPISYPLPVTPNSIPKLISVTVTPDIGHMLSSPQEHQHSHHQARLQTQNKPPPVHHHHTNNNNNNNNNNVTTNNNNTVNSRVINLGTSNNTALLQLYANANVPPPRSSTVPRRFGWPSHLSHDVVPPRVTQSRSIFAHNEKMVYGDPKDILIPPKYRPSLQRLQLQLQQMHANHDPTHTGILDLTQRSNDKSVFPRPSLEIVKVPVVPRPNPLNLEMRNSSAIKEKPTDYSKRNTFPAYQNVLDGRTMASNNLEITIVGPKQKHNHANGPTSHVRIPSPHRNNVLPVQRRQHMNGKYTTRSEPVSPYTPRKPSHPVIPNVPNLNHLNCANSYPRMASMQHQNTIDRRKNVDMGGNKEQHQHQHQHQQHQHQHQHQHQHQHQHQHQHQHQHQHQHQHQHQHQHHQQQQQRRISEGDKSLMNQQQQQQQQQQQQQQQQQQQQQQQHQQQQPESRHQDVGRRHSVPSIPSGFVPGVPQNNHPAYVPQLPNAPGKFLPILDPMYYSAFYNGLFPPPPPIPPTAAATNFLPPEFSAYYKELLASSQPRLGMTGQHQPAAPTSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00760780;
90% Identity
iTF_01122871;
80% Identity
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