Basic Information

Gene Symbol
ARID5B
Assembly
GCA_014737395.1
Location
JACXII010000018.1:3698012-3704255[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.5e-24 2e-20 72.8 0.0 1 89 252 338 252 338 0.95

Sequence Information

Coding Sequence
ATGCCCTGCAAGTTTTATCGTAAAGAAAAGTTACACGATGAAACACGTGGAGAACTTTTCGTCCTACTTTTAGAAGATATAGACGAAGTGCTGACGATATCGGAGAAGGTGGTCGTACGGGTTCACGATCTCGTCACCTGGTTATCGCCTACGTTGGAATGGTCGTGGGGTCGCGAGGTATCTTACCCACCGACCCCGACGTCATCTCCGGCGAACAGTCCGCTAAGGTACGAGATACCACAACCTCAGGTGCTCACCGACCCTGGCATCGATTTCTCAGACGTCGATAAGCAACAGAAGGAGTACGAAAACAATCACAACACAAGGAAATCGGATTGTATTTCTCAAACGAAAGTGGTCGTGCTCTCGTACCCCAGGTACTGTCGATATCGAGCGCTGTTGCGTAGGCTCGAAGGCGCCGAACCGTCCTGGCTTTGCTCATCCATAGCAGCTGCATTAGGTGGATTCACCGCCACACCAGGTACGAGGGTACTCTTCTGCAGAGATACCTTCGACTACCCGGACCTTGAAACTCATGAGCTCCTCTGCAATCACCTAGCACCGAAATTGAAAGGAAGACCGAGAAGGAAGCGTAAAAAGCGTAGCGCATCACCGGGCGAATCGAGCAATGAGAGCGAGGCTTCCGTGGCGTCTACCTCGAAGAGTGCCCCAGCGAGTTCGAACGTGGTGGTACCGAGCGTTGGAAGGCCACCTTCGTCGGTGGTACGACGAAGCGAGCGGAAGACCACCGCCGAGGAAAAGAAATTCCTAACGGATGTGCAGAATTTCATGAACTCGCGGGGTACGCCTGTCGGAAAGATGCCACTGCTGGGCTACAGGCAGATCGATCTCTTCCTGTTTTATACGAAAGTGCAGTTGCTCGGTGGCTACGATTCCGTCAGTGCTGGTCGACTCTGGAAAAACATTTACGACGACATAGGTGGTAATACAGGGTCCACCAGCGCTGCGACTATCACTCGACGACATTACGAAAGGTTACTGTTACCCTATGAGAGGTATCAAAGAGGAGAGGAAGCAAAAGTTAGACTGACACCCGGAAGGCGAACTAAGAGTAGCAGCGTGTCCGAAGAATCCGAAGATATTAAGCAAGAGACGAACGATTCTTATCCATCGGAAACGCCTCCCCCTGTAGAAACAAATCCTACCGCTACAACTCCTCCCCTTCAATCAATCGTATCGCCGGCAGCGCCGTTTCTTTCGAGCGAAAAACCGAAGACGGAGTCTGGCAAAACATCGTCTCTGCGCAGCGTAAGAGTGAAACAAGAACGCTTGAAATCGTTAAATACTATGATTGCCAATAGTACGCCATCGCCCAGCCAACAAGCCAGCCAACTACCAAGTCCACCACCTTCTTCTAATACGTCAATTTCAACGCCGAGTAGTACACCGTCTACGACGCCCACGAATAGTACTGGAAGTCAAAGTGTATTAGAGAGGCAGTTGAACAGTCCTCTGATATCGCAACAAGTTCCACCGTCGTGTTCACCGCCGGGTCTTCCGGTAACTACAGTGGTAACGAATGCTTCTACGGTGGTAACGTTAACACCACCACCGGAGAAGGATATGAAAGAAATCAAACTAGATCCTAAACAAACCACCCTATTGGCTCAGGGTAAGGAGAACATACCGTTGTTCGGCGAGAAGTCAATTTTCGCGGAGAAGACGATAGTGCCTCCTAGGTCACCAGAAGTGATTGACCTTGAGACGGAGAGTGACACGAGTAGGGATAAGATAATCATTCCCAGCTTTAAGAAACGTAAATTGGAAATACTTCGCGAGGGTGGTCTCGAAGTCACTGCCGTTGACTTGGATACGCGACCCAGCGTGATTCAAAGCAATCCTCCTGCGCCAGCAACAATGAAATCCGAAGAAAAACCGCCAATATCGTATCCACTTCCAGTCACACCTAACTCCATTCCTAAGTTGATTTCCGTCACCGTAACGCCGGACATAGGGCACATGTTATCGTCTCCTCAAGAGCATCAACATCATCATCATCATCAGGCACGACTACAAACGCCGACCAAGCAACATCCCGCTCATCACAATAACAATAATAATATTATGATGAATAATAATAACATGGTGAATAGCCGCGTAATAAATCTTGGTACTTCTAATAACGCCGCGTTACTACAATTGTACGCGAACGCTAATGTCCCGCCACCAGCGTCGTCGGGGTTGCATCAAGCAAATCATCGTTTCGTACCGCCAATTGTTCCTAACGGTAGGATATTTCCGCCCAAGGTGACACAGTCAAGGTCGATATTCGCACACAACGAAAAAATGGTTTACGGAGATCCGAAAGAGATTCCTATCCCTCCAAAGTATCGTTCCACGCTGCATCGTTTGCAGCCACATCAGATACACAATAATAACGACCCTGTGTACGGCGGAGTCCTCGACTTAACGCAAAAATCCAACAAGCCGGTGTTCCCGAGGCCGAGCTTAGAAATAGTGAAAGTACCTGTAGTGCCGAGGCCTAATCCATTAAACTTGGAGATGAGGAACTCGTCGATTAAAGAGAAACCAACAGATTGTTCGAAACGAAGTACCTTCCCTGGTTACCAGAACGTACTCGACAGTCGAACGATGGCTTCGAATAACTTAGAAATTACGATCGTAAACCCTAAGCAAAAAAATAATCACTTAAGTACACCGACGCACGTTCGGGTATCGAGTCCATCTAGAAATAGCGCGATACCTGTGCAAAGAAGGCAACACCTGAACGGCAAACGACACAGTGTTCCGAGTATACCTTCTGGTTATGTACCTACGGTACCGCAAAACAATCCAGCTTTCTTTCCACAACTGCCAAACACGCCCGGCAAGTTCCTACCGATTTTAGACCCCATGTACTATTCCGCATTCTATAATGGTTTATTTCCCCCGCCGATTCCGCCCACGGCTGCCACGTCGTTTTTACCGCCGGAATTTAGTGCGTACTACAAAGAATTACTTGCTTCCTCGCAACCAAGACTGGGGATGGCGGGGCAGCATCAGCCAGCTGCTCCAACGTCTAAGTAG
Protein Sequence
MPCKFYRKEKLHDETRGELFVLLLEDIDEVLTISEKVVVRVHDLVTWLSPTLEWSWGREVSYPPTPTSSPANSPLRYEIPQPQVLTDPGIDFSDVDKQQKEYENNHNTRKSDCISQTKVVVLSYPRYCRYRALLRRLEGAEPSWLCSSIAAALGGFTATPGTRVLFCRDTFDYPDLETHELLCNHLAPKLKGRPRRKRKKRSASPGESSNESEASVASTSKSAPASSNVVVPSVGRPPSSVVRRSERKTTAEEKKFLTDVQNFMNSRGTPVGKMPLLGYRQIDLFLFYTKVQLLGGYDSVSAGRLWKNIYDDIGGNTGSTSAATITRRHYERLLLPYERYQRGEEAKVRLTPGRRTKSSSVSEESEDIKQETNDSYPSETPPPVETNPTATTPPLQSIVSPAAPFLSSEKPKTESGKTSSLRSVRVKQERLKSLNTMIANSTPSPSQQASQLPSPPPSSNTSISTPSSTPSTTPTNSTGSQSVLERQLNSPLISQQVPPSCSPPGLPVTTVVTNASTVVTLTPPPEKDMKEIKLDPKQTTLLAQGKENIPLFGEKSIFAEKTIVPPRSPEVIDLETESDTSRDKIIIPSFKKRKLEILREGGLEVTAVDLDTRPSVIQSNPPAPATMKSEEKPPISYPLPVTPNSIPKLISVTVTPDIGHMLSSPQEHQHHHHHQARLQTPTKQHPAHHNNNNNIMMNNNNMVNSRVINLGTSNNAALLQLYANANVPPPASSGLHQANHRFVPPIVPNGRIFPPKVTQSRSIFAHNEKMVYGDPKEIPIPPKYRSTLHRLQPHQIHNNNDPVYGGVLDLTQKSNKPVFPRPSLEIVKVPVVPRPNPLNLEMRNSSIKEKPTDCSKRSTFPGYQNVLDSRTMASNNLEITIVNPKQKNNHLSTPTHVRVSSPSRNSAIPVQRRQHLNGKRHSVPSIPSGYVPTVPQNNPAFFPQLPNTPGKFLPILDPMYYSAFYNGLFPPPIPPTAATSFLPPEFSAYYKELLASSQPRLGMAGQHQPAAPTSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00760780;
90% Identity
iTF_00231105;
80% Identity
-