Basic Information

Gene Symbol
ARID5B_1
Assembly
GCA_030770465.2
Location
JASKOS020000015.1:1245962-1257616[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.9e-24 4.6e-20 72.9 0.0 1 89 234 320 234 320 0.95

Sequence Information

Coding Sequence
ATGTTTGTGAAACGTTTAAAagaatatGACGAGGTGCTGACGATATCAGAGAAGGTAGTGGTCCGGGTTCACGATCTCGTAACATGGTTGTCGCCCACGCTAGAGTGGTCATGGGGTCGGGAAGTGTCTTACCCACCGACACCTACATCATCCCCGGAGAGCAGTCCGTTAAGATACGAGATGCCTCAACCGCAGGTGCTCACCGACCCCGGCATCGACTTCTCGGATGTCGATAAGCAACAGAAAGAATACGAGAACAATCACAACACGAGGAGATCGGACTGTAGCTCGCAAACGAAGGTTGTCGTGCTCTCGTACCCCAGGTACTGTCGGTATCGAGCACTCCTACGTAGACTCGAGGGTGCAGAACCGTCCTGGCTTTGTTCATCCATAGCAGCGGCACTCGGTGGATTCACCGCCACACCGGGCACCAGGGTACTGTTCTGTAGAGACACCTTCGATTACCCGGACCTCGAGACTCACGAACTACTGTGCAACCACCTAGCGCCAAAATTGAAAGGAAGGCCAAGGAGAAAGCGTAAAAAGCGTAGCGCGTCGCCCGGCGAATCTAGCAATGAGAGCGAGGCTTCCGTCGCGTCTACGTCCAAAAGCACGATACAGAGTTCCAATACGATAGTGCCCAATGTTGGCAGGCCACCCTCGTCTGTTGTACGTCGAAGCGAGCGGAAGACCACTGTCGAGGAAAAGAAGTTCCTCACGGATGTGCAGAATTTCATGAACTCGCGGGGTACGCCTGTCGGAAAGATGCCACTGCTGGGCTACAGGCAGATTGATCTCTTcctgttttatacaaaagtgcAAATGCTTGGTGGTTATGATTCCGTCAGCGCTGGTCGTCTTTGGAAGACCATCTACGATGACATAGGTGGTAACACAGGATCCACCAGTGCAGCGACCATTACTCGTCGTCATTATGAAAGGCTGTTGTTACCTTACGAAAGGTATCAAAGGGGTGAAGAAGCGAAAGTGAGACTGACACCTGGGAGACGTACTAAAACGGGTAGTGTATCAGAAGAGTCTGATGACATTAAGCAAGAAACCAATGATCCATATCCATCAGAAACACCTCCACCTGTGGAACCAAGTCTTACGACCGCAACCTCTCCTCTCCAACCAATTATATCAACACCGTTCCTCTCAAGTGAAAAACCGAAAACGGAGTCTGGCAAGACGTCATCTCTGCGTAGCGTACGAGTCAAGCCAGAACGTCTGAAGTCATTAAACACCATGATCGCTAATAGCACATCATCGCCCAGCCAGCAAACCAGTCAACTGCCAAGTCCACCACCTTCCTCCAACACGTCAATATCAACGCCGAGTAGTACACCCTCCACAACGCCCACGAACGGTACTGGAAGTCAAAGCGTCCTCGAGAGGCAGCTAAACAGTCCTCTGATATCGCAGCAAGTACCACCGTCGTGTTCGCCGGTTCTGCCGGTCACTACCGTAGCAACGAACGCTTCTACTGTCGTAACATTGACTCCGCCGCCAGAGAAGGACATGAAGGAGATCAAGCTGGATCCGAAACAAACCACCCTGTTGGCCCAGGGCAAGGAGAACATACCGTTGTTCGGCGAAAAGGCGATATTCGCGGAGAAAGCGATAGTACCGCCTAGGTCGCCAGAAGTGATCGATCTCGAGTCGGAGAGCGATACGAGTAGGGACAAGATAATCATTCCCAGTTTTAAGAAGCGCAAGCTCGAAATCCTTCGCGAAGGTGGTTTGGAAGTCACTGCCGTTGATTTGGACACGCGACCGAGCGTAATTCAAAGCAACACTCCGGCCCCGGCGACTATGAAGACCGAGGAGAAACCGCCAATATCATATCCTCTTCCAGTCACACCGAATTCCATTCCTAAACTGATTTCTGTCACCGTAACGCCAGACATCGGTCACATGTTGTCGTCGCCGCAGGAGCATCAGCATCCTCATCATCAAGCACGATTGCAAGTACCGAACAAGCAACCGCCTGTTCATCacaataacaataacattACGATGAACAACAACAACATGGTGAATAGTCGAGTGATAAACCTTGGTACTTCGAACAACAACGCGTTGCTGCAGTTATACGCGAACGCGAACGTTCCGCCACCCGTATCGTCGACAATCCCGCAAGCTAATCACCGTTTCGTACCGCCGACTGTCCCAAACGGAAGGATATTTGCACCGAAGGTGACGCAGTCCAGGTCGATATTCGCGCACAACGAAAAAACAGTTTACGGAGATCCGAAAGACATTCTTGTCCCCCCAAAGTATCGTCCCTCGTTGCATCGTTTACAGCATCCGCAGCCGCACGTTAATTGTAACAACGATCTAATGGCGCACGGAGGTGTGCTGGATCTGACGCATAAAGCTACCGACAAATCGGTATTCCCGAGGCCGAGCCTAGAAATAGTGAAAGTACCTGTAGTGCCGAGGCCTAATCCATTGAACCTGGAAATGAGGAACTCGTCCGTGGCTAAGGAGAAGCCGACGGATTGTTCGAAACGAAATAGCTACCCTGGTTATCAGAACGTGCTCGATAGCCGAACCATGGCGTCGAACAACCTGGAAATCACGATCGTCAACCCGAATAAACAAAGGAATAACCACACGAGCGCACCGACGCCGGTTCGGGTACCCAGTCCACCTAACAGAAGTAGTACAATACCAATGCAGAGAAGGCAACAAGTGAACGGGAAGTACGCGACAAGGAGTGAGCCAGTCTCGCCGTACACGCCAAGGAAGCCAACTAGCCACCCTGTTATACCGAACGTACCGAACGTGAATCACTTGAACAGTGGGAACTACCCTAGAATACCAGTAATGCAGCAGCAAGTCAGTATAGACAGGAGAAAAAACATGGAAACGGGCGGTAAGGAACAGCTGCACCCACAGTATCTGCACCAGCAGCATCAACACCAGCATCAACGTCGGATTAGCGAGGGCGACAAGACGTTAATCGCACATCAACAACAGCATCAACAACCACAGCatcagcaacagcagcaggACTTGAGGCAAACCGAGGCGAACAGACGGCATAGTGTACCCAGTATACCTTCGGGCTTCGTACCTGCTGTGCCACAAAGTAATCCAGCCTTCCTCCCGCAACTGCCAACGAACACGTCCGGCAAGTTCCTACCGATGTTGGACCCGATGTACTATTCCGCGTTCTATAATGGCTTGTTCCCGCCGTCGATTCCGCCCACGGCTCCCGCGTCGTTTCTCTCGCCGGAAATCAGCGCATACTACAAAGAATTACTTGCTTCCTCGCAACCAAGACTGGGGATGGCGGGGCAGCACCAGCCGGCTGCCCCAACATCGAAGTAG
Protein Sequence
MFVKRLKEYDEVLTISEKVVVRVHDLVTWLSPTLEWSWGREVSYPPTPTSSPESSPLRYEMPQPQVLTDPGIDFSDVDKQQKEYENNHNTRRSDCSSQTKVVVLSYPRYCRYRALLRRLEGAEPSWLCSSIAAALGGFTATPGTRVLFCRDTFDYPDLETHELLCNHLAPKLKGRPRRKRKKRSASPGESSNESEASVASTSKSTIQSSNTIVPNVGRPPSSVVRRSERKTTVEEKKFLTDVQNFMNSRGTPVGKMPLLGYRQIDLFLFYTKVQMLGGYDSVSAGRLWKTIYDDIGGNTGSTSAATITRRHYERLLLPYERYQRGEEAKVRLTPGRRTKTGSVSEESDDIKQETNDPYPSETPPPVEPSLTTATSPLQPIISTPFLSSEKPKTESGKTSSLRSVRVKPERLKSLNTMIANSTSSPSQQTSQLPSPPPSSNTSISTPSSTPSTTPTNGTGSQSVLERQLNSPLISQQVPPSCSPVLPVTTVATNASTVVTLTPPPEKDMKEIKLDPKQTTLLAQGKENIPLFGEKAIFAEKAIVPPRSPEVIDLESESDTSRDKIIIPSFKKRKLEILREGGLEVTAVDLDTRPSVIQSNTPAPATMKTEEKPPISYPLPVTPNSIPKLISVTVTPDIGHMLSSPQEHQHPHHQARLQVPNKQPPVHHNNNNITMNNNNMVNSRVINLGTSNNNALLQLYANANVPPPVSSTIPQANHRFVPPTVPNGRIFAPKVTQSRSIFAHNEKTVYGDPKDILVPPKYRPSLHRLQHPQPHVNCNNDLMAHGGVLDLTHKATDKSVFPRPSLEIVKVPVVPRPNPLNLEMRNSSVAKEKPTDCSKRNSYPGYQNVLDSRTMASNNLEITIVNPNKQRNNHTSAPTPVRVPSPPNRSSTIPMQRRQQVNGKYATRSEPVSPYTPRKPTSHPVIPNVPNVNHLNSGNYPRIPVMQQQVSIDRRKNMETGGKEQLHPQYLHQQHQHQHQRRISEGDKTLIAHQQQHQQPQHQQQQQDLRQTEANRRHSVPSIPSGFVPAVPQSNPAFLPQLPTNTSGKFLPMLDPMYYSAFYNGLFPPSIPPTAPASFLSPEISAYYKELLASSQPRLGMAGQHQPAAPTSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00760780;
90% Identity
-
80% Identity
-