Basic Information

Gene Symbol
ARID5B
Assembly
GCA_945859565.1
Location
CAMAOB010000095.1:285935-293702[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.7e-23 3.6e-20 72.5 0.0 1 89 286 372 286 372 0.95

Sequence Information

Coding Sequence
ATGTGCATTGTTCGCTTTGCCAAAAGCGACATCGTTAATTCCATCGGTGATTCTCTGTTCAACTTCTCTGAGCCAAGTCAGCTGGCAGTTCCAGCGCTATGGGGGTTAAAACCTGGTCGTTTCGCTTGGCTCGAGGCTCTTCTCGCCGGTGGTAAATGGATTTGCCCGCGGAGTCATCGGGACGAGGTGCTGACGATATCCGAGAAGGTGGTGGTCCGCGTTCACGATCTCGTCACGTGGTTATCGCCAAGCTTGGAATGGTCATGGGGTCGGGAAGTGTCTTACCCACCGACACCCACGTCGTCCCCGGAGAACAGCCCGTTGAGGTACGAGATACCTCAGCCCCAGGTGCTCACAGATCCTGGCATCGATTTCTCGGATATCGAGAAGCAACAGAAGGAGTTCGAGAGCAACCACAACACGAGGAAGGTGGAGTACGGCGCCCAAACGAAAGTGGTGGTGCTCTCGTACCCCAGGTATTGTCGATATCGAGCCCTTCTACGTAGACTCGAAGGTGCCGAACCGTCCTGGCTTTGCTCGTCCATAGCAGCCGCCCTAGGTGGATTCACCGCCACACCGGGTACCAGAGTGCTCTTCTGCAGAGACACCTTCGACTATCCGGACCTAGAAACTCACGAGCTACTCTGCAATCATCTAGCGCCAAAATTAAAGGGACGGCCAAGGAGAAAGCGTAAAAAGCGCAGCGCATCACCGGGCGAGTCGAGCAACGAGAGCGAAGCCTCGGTGGCGTCTACCTCGAAAAGCGCACCGGTGACGAGTTCGAACATGGTGGTGCAAAGCGTGGGTAGGCCACCCTCGTCGGCTGTTCGACGAAGCGAGAGGAAAACGAGCGCGGAGGAGAAGAAGTTCCTCACGGACGTGCAGAATTTCATGAACTCGCGGGGTACGCCTGTCGGAAAGATGCCACTGCTGGGCTACAGGCAGATCGACCTCTTCCTGTTTTACACGAAGGTCCAATTATTGGGTGGTTACGATTCGGTCAGCGCGGGCCGATTATGGAAGAGCATCTACGACGATATCGGTGGTAACACGGGCTCTACCAGCGCCGCGACAATCACTCGTCGACATTACGAAAGGTTACTGTTGCCTTACGAGAGGTATCAGAGGGGCGAGGATGCAAAAGTCAAGCTGACTCACGTTAGACGCGCGAAAAGTAATAGCGCGTCCGACGAGTCCGAGGATGCGAAGCAAGAACCGAACGATCCGTATCCACCGGAAACGCCTCCTCCCGTAGAAACGAGCCTTACCGCCGTGACTTCTCCTCTTCAACCTCTTATACCATCGACGCCCTTCCTTCCGGGCGAGAAACCGAAAACGGAAACCAGCAAGACGTCGTCGTTGCGTAGCGTACGAGTGAAACCGGACCGGTTAAAATCGTTGAACACGATCATCGCCAACAGCACGTCGTCGCCTAGCCAGCAAACCAACCAACTGCCAAGTCCTCCACCTTCCTCGAACACGTCGATCTCGACACCGAGCAGTACACCCTCCACCACACCGACGAACGGTACCGGAAGTCAGAGCGTTCTAGAGAGGCAACTGAACAGTCCTCTGATATCGCAACAAGTACCACCGTCGTGTTCGCCGCCGGGTCTACCGGTCACCACAGTAGCGACGAATGCCTCTACGGTCGTCACGTTGACTCCGCCACCGGAGAAGGATATGAAAGAGCTGAAGTTAGATTCGAAACAAACCACCCTGCTGGCACAGGGTAAAGAGAACATCCCCTTGTTCGGAGAGAAGTCTATATTCGCCGAAAAAGCGATAGTGCCTCCCAGGTCGCCAGAGGTGATCGACCTCGAGACGGAGAGCGACACGAGTAGGGACAAAATAATCATTCCCAGTTTCAAGAAACGCAAGCTCGAGATACTTCGCGAGGGTGGTCTCGAAGTCACTGCCGTTGATCTGGACACGCGACCGAGCGTGATCCAAAGCAATCCTCCGGCTCCAGCGACCATGAAGTCCGAGGAAAAGCCGCCAATATCTTATCCGCTTCCAGTAACGCCTAACTCCATTCCCAAGTTGATTTCCGTCACCGTGACACCGGACATCGGTCATATGTTGTCGTCGCCGCAAGAGCACCAGCATTCTCATCATCAAGCACGATTACAAACGCAGAACAAACCGCCTCCCGTTCATCATCATCATACCAACAATAACAACAACAATAACAACAACGTCACGACGAATAACAACAACGCGGTGAACAGCCGCGTGATAAACCTCGGCACTTCGAACAACACGGCGTTGTTGCAATTGTACGCGAACGCGAACGTACCGCCACCTAGGTCGTCGACGGTGCCCCGCCGATTCGGGTGGCCTAGTCACCTCAGCCACGACGTTGTTCCGCCCAGGGTGACGCAGTCCAGGTCGATATTCGCACACAACGAAAAGATGGTTTACGGAGACCCGAAAGATATTCTCATCCCTCCAAAGTATCGTCCTTCGTTGCAGCGTTTGCAGTTGCAACTGCAACAGATGCACGCGAACCACGATCCAACGCACACCGGGATCCTCGACCTGACGCAGAGGTCCAACGACAAGTCGGTGTTCCCGAGACCGAGCCTAGAAATAGTGAAAGTACCTGTAGTGCCGAGGCCTAATCCGTTGAATCTGGAAATGAGGAACTCGTCCGCGATCAAAGAGAAACCGACGGACTACTCGAAACGAAATACCTTCCCCGCTTACCAGAACGTGCTCGACGGTCGAACGATGGCTTCGAACAACCTGGAGATCACGATCGTCGGTCCCAAGCAGAAGCATAATCACGCGAACGGGCCGACGTCGCACGTGCGGATACCGAGTCCGCACAGGAACAACGTCCTGCCCGTTCAAAGAAGGCAACACGCGAACGGCAAGTACACGACGAGGAGCGAGCCAGTTTCACCGTATACGCCCAGGAAACCGAGTCATCCCGTCATACCTAACGTACCTAACCTGAATCACTTGAACTGCGCCAATTCCTATCCGAGGATGGCGTCCATgcaacaccagaacacgatcgacaggagaaaaaacgtggatatgggcggtaacaaggaacaacatcagcaccagcatcagcaccagcagcaccagcagcaccagcaccagcaccaacaccaacatcaacaccaacaacaccaacatcaacatcaacaccaacaccaacaccatcagcatcatcaacagcagcagcagcagcagcagcagcagcagcagcgtcgaatcagcgaaggcgacaagtcgttgatgaaccagcaacaacagcagcagcagcaacaacaacaccagcaacagcaaccagaatctaggcaacaggaagtcggcagacgacaCAGTGTTCCAAGCATACCATCGGGTTTCGTTCCTGGTGTGCCGCAAAACAATCATCCAGCCTACGTTCCCCAACTGCCAAACGCACCCGGCAAGTTCCTACCGATTCTGGATCCCATGTATTATTCCGCGTTCTACAACGGCTTGTTCCCGCCGCCGCCGCCGATTCCGCCCACGGCTGCTGGCACCAACTTTCTACCGCCAGAGTTCAGCGCGTACTACAAAGAACTACTTGCTTCCTCGCAACCAAGACTGGGGATGACGGGACAGCATCAGCCGGCTGCCCCGACGTCTAAATAG
Protein Sequence
MCIVRFAKSDIVNSIGDSLFNFSEPSQLAVPALWGLKPGRFAWLEALLAGGKWICPRSHRDEVLTISEKVVVRVHDLVTWLSPSLEWSWGREVSYPPTPTSSPENSPLRYEIPQPQVLTDPGIDFSDIEKQQKEFESNHNTRKVEYGAQTKVVVLSYPRYCRYRALLRRLEGAEPSWLCSSIAAALGGFTATPGTRVLFCRDTFDYPDLETHELLCNHLAPKLKGRPRRKRKKRSASPGESSNESEASVASTSKSAPVTSSNMVVQSVGRPPSSAVRRSERKTSAEEKKFLTDVQNFMNSRGTPVGKMPLLGYRQIDLFLFYTKVQLLGGYDSVSAGRLWKSIYDDIGGNTGSTSAATITRRHYERLLLPYERYQRGEDAKVKLTHVRRAKSNSASDESEDAKQEPNDPYPPETPPPVETSLTAVTSPLQPLIPSTPFLPGEKPKTETSKTSSLRSVRVKPDRLKSLNTIIANSTSSPSQQTNQLPSPPPSSNTSISTPSSTPSTTPTNGTGSQSVLERQLNSPLISQQVPPSCSPPGLPVTTVATNASTVVTLTPPPEKDMKELKLDSKQTTLLAQGKENIPLFGEKSIFAEKAIVPPRSPEVIDLETESDTSRDKIIIPSFKKRKLEILREGGLEVTAVDLDTRPSVIQSNPPAPATMKSEEKPPISYPLPVTPNSIPKLISVTVTPDIGHMLSSPQEHQHSHHQARLQTQNKPPPVHHHHTNNNNNNNNNVTTNNNNAVNSRVINLGTSNNTALLQLYANANVPPPRSSTVPRRFGWPSHLSHDVVPPRVTQSRSIFAHNEKMVYGDPKDILIPPKYRPSLQRLQLQLQQMHANHDPTHTGILDLTQRSNDKSVFPRPSLEIVKVPVVPRPNPLNLEMRNSSAIKEKPTDYSKRNTFPAYQNVLDGRTMASNNLEITIVGPKQKHNHANGPTSHVRIPSPHRNNVLPVQRRQHANGKYTTRSEPVSPYTPRKPSHPVIPNVPNLNHLNCANSYPRMASMQHQNTIDRRKNVDMGGNKEQHQHQHQHQQHQQHQHQHQHQHQHQQHQHQHQHQHQHHQHHQQQQQQQQQQQQRRISEGDKSLMNQQQQQQQQQQHQQQQPESRQQEVGRRHSVPSIPSGFVPGVPQNNHPAYVPQLPNAPGKFLPILDPMYYSAFYNGLFPPPPPIPPTAAGTNFLPPEFSAYYKELLASSQPRLGMTGQHQPAAPTSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00760780;
90% Identity
iTF_01122871;
80% Identity
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