Basic Information

Insect: Globia sparganii
Gene Symbol: -
Assembly: GCA_949316385.1
Location: OX438656.1:11353699-11355628[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.9e-09 7.6e-07 29.8 0.0 1 38 18 56 18 61 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.9e-09	7.6e-07	29.8	0.0	1	38	18	56	18	61	0.91

Sequence Information

Coding Sequence: ATGGTTCGCACCTACAAAAAGACCGCGGGTACCcgcaattataaaaattacacaGAGGAGACAATGGAAGAAGCAATAGAAAAAATCACAAATAGCGAATTGTCCATTAATGCTGCTTCACTTAAGTATAAAATTCCGTTTGGGAcactttataataaatataaaggaTTACACGGAAGGACGCCTGGTGCCCAACCAGTTTTCATGCACAATGGAGAAATCGCAATATTACGAGCTGCGGCTACATGCGGCGATTGGGGTTTTCCTCTTACTTTGTTAGACCTTAGAATGTTTGCAAAGGCTTATTTGGATAAGCAAGGGAAGACAGTAGAACGGTTTACAAATAACCTACCAGGTGTCGAATGGGCCATTAGCGTTCTGAAGCGCCATAAAAACGCCTATGGTCAAAGACTATCAACTAATATTAAAAGGTCTAGAGCGACTGTGGGCCGCGAATCACTAAATATATATTTCGACAACCTTCACTCTGAGGTAGAAAATGTACCACCGTCTAATATATTCAACTATGATGAATCTAATATGGCCGACGATCCGGGGAAAAAAAGATGTGTTTATAGAAGAGGAGTAAAATATCCTGAGAAAGTGATGAACTTTTCGAAGAGTTCTACTACAGTTATGATTTGTGGTTCTGCAGATGGCACATTATTGCCGCcatatattatttacaaaagtaCCCACCTATATGATACATGGAAGGAAAGAGGTATTATTGGTAAACCGTGCTGTGAAGAGCCATGTTGTAGCCGGGGATGCCGTTACAATAGAACAACTAGTGGATGGATTGATACACCAACATTTAGAGATTGGTTCATGACTTGTTTTTTACCCCATGCCAAAAGACTAGAAGGCAAAAAGGTGTTAATTGGTGATAATCTATCGTCTCATATTGACAACGATGTAATAGCTACATGTGAAACAAATAACATCAGTTTTATATGTTTGGTGCCTAATTCAACGCATTTAACCCAGCCGCTTGATGTTGGCTTTTTCCGTCCGCTAAAGATTGCATGGAGACAAACTCTTGAAGATTGGAAAAAAGCCAATTTACGAACTACATCTGTACCTAAGGAGTCCTTCCCACATCTGTTGAAAAAGGCAATATTGAATATGGATCAAAAAGCACCAAAAAATGATAAAGACGCTTGTATGGAGCTGTCAGCTGTAAAAAGAAATTTGGTGAGCAGTTTTAAGGCTACTGGTATCGCTCCTCTTGATAGAAATAGGGTTTTAAACAAATTGCCACCCGAGTCACCTTCTCCTGAAATGGAAACTGTCGTCCGAGATTCTTTAACAGAATTTTTAAGAGAACAAAGATTTGGAAATGAATCACAGCCACCAAGGAAGAGGACAAGACTTCAAATTGAACCCGGAACAACGTCTATGCAACAATCGATGCAAAGTCCTGTTCCTAATACCAGCGAGCCATCCACAAGCTATCAAACTGGTCAAGAGGACAACAATCATGATATTACCCATTATGATTCAGATACTGCAAATACAGTGCCGAATAATGCTAGAAATATTTTAAGCGATTTTACACAGATTCCCACAATAGGACAATTTATTTTAGCAAAATTTGGATCAGAGAAGGGGAAAAAGACATATCATTATGTATGTTCTATTGAAGATATCATTGACACTAAACTGATTGTTCAAGGTTATAAgtcccaaaaaaaaaccaaaactatttttaaggaAGTTCCCAAAGATGTATCAATCATTGAAGTAAGTGACATAGTTTCTTATCTTCCCAAACCAAAATACAACAACGAATGCTACTCGTTCCCAAATGACGTGATGATCAAAGAATTGTAG
Protein Sequence: MVRTYKKTAGTRNYKNYTEETMEEAIEKITNSELSINAASLKYKIPFGTLYNKYKGLHGRTPGAQPVFMHNGEIAILRAAATCGDWGFPLTLLDLRMFAKAYLDKQGKTVERFTNNLPGVEWAISVLKRHKNAYGQRLSTNIKRSRATVGRESLNIYFDNLHSEVENVPPSNIFNYDESNMADDPGKKRCVYRRGVKYPEKVMNFSKSSTTVMICGSADGTLLPPYIIYKSTHLYDTWKERGIIGKPCCEEPCCSRGCRYNRTTSGWIDTPTFRDWFMTCFLPHAKRLEGKKVLIGDNLSSHIDNDVIATCETNNISFICLVPNSTHLTQPLDVGFFRPLKIAWRQTLEDWKKANLRTTSVPKESFPHLLKKAILNMDQKAPKNDKDACMELSAVKRNLVSSFKATGIAPLDRNRVLNKLPPESPSPEMETVVRDSLTEFLREQRFGNESQPPRKRTRLQIEPGTTSMQQSMQSPVPNTSEPSTSYQTGQEDNNHDITHYDSDTANTVPNNARNILSDFTQIPTIGQFILAKFGSEKGKKTYHYVCSIEDIIDTKLIVQGYKSQKKTKTIFKEVPKDVSIIEVSDIVSYLPKPKYNNECYSFPNDVMIKEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01156264; iTF_01156265; iTF_01156266; iTF_01155036; iTF_01155037; iTF_01155038; iTF_00726252; iTF_00726259; iTF_00726251; iTF_00432084; iTF_00432081; iTF_00432085; iTF_01026038; iTF_00667364; iTF_00122313; iTF_00122314; iTF_00667338; iTF_01533866; iTF_00850637; iTF_00850638; iTF_00071345; iTF_00071346; iTF_01026034; iTF_00172758; iTF_01026039; iTF_01026040; iTF_01439852; iTF_00171694; iTF_00771832; iTF_00771831; iTF_01367744; iTF_01367743;
90% Identity: -
80% Identity: -